FC871748
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871748 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11 Identity = 39/127 (30.71%), Postives = 57/127 (44.88%), Query Frame = 1 Query: 112 LVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYP-DGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKK 489 LVDE N E I GPPDT YEGG + + P YP +PP V+F T+IWHPN+ G +C+ IL ++W T+ + P + A +++ + FK+ Sbjct: 31 LVDE-NFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDIL-------------KDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQ 143
BLAST of FC871748 vs. ExPASy Swiss-Prot
Match: UBE2F_RAT (NEDD8-conjugating enzyme UBE2F OS=Rattus norvegicus GN=Ube2f PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11 Identity = 37/121 (30.58%), Postives = 55/121 (45.45%), Query Frame = 1 Query: 154 IGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTV-EXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRR 513 + P + Y+GG F P Y PP VK T+IWHPN+ G +C+S+L D G W P T+ + N + P N+EAA+ ++DF+ KV ++R Sbjct: 69 VSPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTG-------WAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRDKVDEYIKR 182
BLAST of FC871748 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11 Identity = 39/136 (28.68%), Postives = 59/136 (43.38%), Query Frame = 1 Query: 73 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDD 480 ++ +P SAG + N++EW TI+GPP ++YEGG F + F YP PP V F T I+H N+ G +C+ IL + W P T+ N P A ++ R++ Sbjct: 97 EITLDPPPNCSAGPKGD-NLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDIL-------------KDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREE 218
BLAST of FC871748 vs. ExPASy Swiss-Prot
Match: UBC12_DICDI (NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11 Identity = 39/138 (28.26%), Postives = 63/138 (45.65%), Query Frame = 1 Query: 97 GFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVR 510 G + D +I ++++I P D LY+ F ++ PS YP PP V T ++HPN+ +G VC++IL + WMPV + PN + P N +AA+ D + F+ V + +R Sbjct: 94 GCAVSFKDTNDILNFNLSIT-PTDGLYQSATFQFTINIPSTYPYDPPKVHCDTLVYHPNIDLEGHVCLNILR-------------QDWMPVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQLMIDNKKTFEANVRQSLR 217
BLAST of FC871748 vs. ExPASy Swiss-Prot
Match: UB2FA_MOUSE (NEDD8-conjugating enzyme UBE2F OS=Mus musculus GN=Ube2f PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11 Identity = 37/121 (30.58%), Postives = 55/121 (45.45%), Query Frame = 1 Query: 154 IGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTV-EXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRR 513 + P + Y+GG F P Y PP VK T+IWHPN+ G +C+S+L D G W P T+ + N + P N+EAA+ ++DF+ KV ++R Sbjct: 69 VSPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTG-------WAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRDKVDEYIKR 182
BLAST of FC871748 vs. ExPASy Swiss-Prot
Match: UBE2F_XENTR (NEDD8-conjugating enzyme UBE2F OS=Xenopus tropicalis GN=ube2f PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11 Identity = 36/121 (29.75%), Postives = 56/121 (46.28%), Query Frame = 1 Query: 154 IGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTV-EXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRR 513 + P ++ Y+GG F + P Y PP VK T IWHPN+ G +C+S+L D G W P T+ + N + P N+EAA+ +D+++ KV ++R Sbjct: 69 VSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTG-------WAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKVEDYIKR 182
BLAST of FC871748 vs. ExPASy Swiss-Prot
Match: UBE2F_XENLA (NEDD8-conjugating enzyme UBE2F OS=Xenopus laevis GN=ube2f PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11 Identity = 36/121 (29.75%), Postives = 56/121 (46.28%), Query Frame = 1 Query: 154 IGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTV-EXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRR 513 + P ++ Y+GG F + P Y PP VK T IWHPN+ G +C+S+L D G W P T+ + N + P N+EAA+ +D+++ KV ++R Sbjct: 69 VSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTG-------WAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKVEDYIKR 182
BLAST of FC871748 vs. ExPASy Swiss-Prot
Match: UBE2F_HUMAN (NEDD8-conjugating enzyme UBE2F OS=Homo sapiens GN=UBE2F PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11 Identity = 40/133 (30.08%), Postives = 62/133 (46.62%), Query Frame = 1 Query: 118 DETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTV-EXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRR 513 ++ + F+ +VT P + Y+GG F P Y PP VK T+IWHPN+ G +C+S+L D G W P T+ + N + P N+EAA+ ++DF+ KV ++R Sbjct: 60 NKLHCFQLTVT---PDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTG-------WAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKR 182 The following BLAST results are available for this feature:
BLAST of FC871748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 168
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871748 ID=FC871748; Name=FC871748; organism=Citrus sinensis; type=EST; length=752bpback to top |