EY664319

Overview
NameEY664319
Unique NameEY664319
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY664319 vs. ExPASy Swiss-Prot
Match: H32_CHLRE (Histone H3 type 2 OS=Chlamydomonas reinhardtii GN=ch3-II PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 2.281e-63
Identity = 125/135 (92.59%), Postives = 129/135 (95.56%), Query Frame = 3 
Query:   75 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIMKLPFHRLVREIAQDFKTDLRFQSHALLALQDAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARKIRGER 479
            MARTKQTARKSTGGKAPRKQLATKAARK+ P TGGVKKPHRYRPGTVALREIRKY KSTELLI KLPF RLVREIAQDFKTDLRFQS A+LALQ+AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR+IRGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKT-PATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSQAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 134
[Close]
BLAST of EY664319 vs. ExPASy Swiss-Prot
Match: H3_STRPU (Histone H3, embryonic OS=Strongylocentrotus purpuratus PE=2 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 3.891e-63
Identity = 122/135 (90.37%), Postives = 129/135 (95.56%), Query Frame = 3 
Query:   75 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIMKLPFHRLVREIAQDFKTDLRFQSHALLALQDAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARKIRGER 479
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+Y KSTELLI KLPF RLVREIAQDFKT+LRFQS A++ALQ+A+EAYLV LFEDTNLCAIHAKRVTIMPKDIQLAR+IRGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVRLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
[Close]
BLAST of EY664319 vs. ExPASy Swiss-Prot
Match: H32_LILLO (Histone H3.2 OS=Lilium longiflorum GN=YAH3 PE=1 SV=3)

HSP 1 Score: 241.891 bits (616), Expect = 3.891e-63
Identity = 122/135 (90.37%), Postives = 128/135 (94.81%), Query Frame = 3 
Query:   75 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIMKLPFHRLVREIAQDFKTDLRFQSHALLALQDAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARKIRGER 479
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKY KSTELLI KLPF RLVREIAQDFK DLRFQS A+ ALQ+A+E+YLVGLFEDTNLCAIHAKRVTIMPKDIQLAR+IRGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKADLRFQSSAVAALQEASESYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
[Close]
BLAST of EY664319 vs. ExPASy Swiss-Prot
Match: H3_CAEEL (Histone H3 OS=Caenorhabditis elegans GN=his-2 PE=1 SV=4)

HSP 1 Score: 241.506 bits (615), Expect = 5.082e-63
Identity = 121/135 (89.63%), Postives = 128/135 (94.81%), Query Frame = 3 
Query:   75 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIMKLPFHRLVREIAQDFKTDLRFQSHALLALQDAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARKIRGER 479
            MARTKQTARKSTGGKAPRKQLATKAARKSAP +GGVKKPHRYRPGTVALREIR+Y KSTELLI + PF RLVREIAQDFKTDLRFQS A++ALQ+A EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR+IRGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
[Close]
BLAST of EY664319 vs. ExPASy Swiss-Prot
Match: H3L1_ARATH (Histone H3-like 1 OS=Arabidopsis thaliana GN=At1g13370 PE=2 SV=3)

HSP 1 Score: 241.506 bits (615), Expect = 5.082e-63
Identity = 122/135 (90.37%), Postives = 128/135 (94.81%), Query Frame = 3 
Query:   75 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIMKLPFHRLVREIAQDFKTDLRFQSHALLALQDAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARKIRGER 479
            MARTKQ+ARKS GGKAP KQLATKAARKSAPTTGGVKKPHR+RPGTVALREIRKY KSTELL  KLPF RLVREIAQDFKTDLRFQSHA+LALQ+AAEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLAR+IR ER
Sbjct:    1 MARTKQSARKSHGGKAPTKQLATKAARKSAPTTGGVKKPHRFRPGTVALREIRKYQKSTELLNRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRAER 135
[Close]
BLAST of EY664319 vs. ExPASy Swiss-Prot
Match: H31_CHLRE (Histone H3 type 1 OS=Chlamydomonas reinhardtii GN=ch3-I PE=1 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 5.082e-63
Identity = 124/135 (91.85%), Postives = 129/135 (95.56%), Query Frame = 3 
Query:   75 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIMKLPFHRLVREIAQDFKTDLRFQSHALLALQDAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARKIRGER 479
            MARTKQTARKSTGGKAPRKQLATKAARK+ P TGGVKKPHRYRPGTVALREIRKY KSTEL+I KLPF RLVREIAQDFKTDLRFQS A+LALQ+AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR+IRGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKT-PATGGVKKPHRYRPGTVALREIRKYQKSTELVIRKLPFQRLVREIAQDFKTDLRFQSQAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 134
[Close]
BLAST of EY664319 vs. ExPASy Swiss-Prot
Match: H3_GRIJA (Histone H3 OS=Griffithsia japonica PE=2 SV=3)

HSP 1 Score: 241.121 bits (614), Expect = 6.638e-63
Identity = 120/135 (88.89%), Postives = 130/135 (96.30%), Query Frame = 3 
Query:   75 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIMKLPFHRLVREIAQDFKTDLRFQSHALLALQDAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARKIRGER 479
            MARTKQTARKSTGGKAPRKQLATKAARKSAP +GGVKKPHR+RPGTVALREIR++ KSTELL+ KLPF RLVREIAQDFK+DLRFQS A+LALQ+AAEAY+VGLFEDTNLCAIHAKRVTIMPKDIQLAR+IRGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRFRPGTVALREIRRFQKSTELLVRKLPFQRLVREIAQDFKSDLRFQSSAVLALQEAAEAYMVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
[Close]
BLAST of EY664319 vs. ExPASy Swiss-Prot
Match: H31T_HUMAN (Histone H3.1t OS=Homo sapiens GN=HIST3H3 PE=1 SV=3)

HSP 1 Score: 240.736 bits (613), Expect = 8.669e-63
Identity = 120/135 (88.89%), Postives = 127/135 (94.07%), Query Frame = 3 
Query:   75 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIMKLPFHRLVREIAQDFKTDLRFQSHALLALQDAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARKIRGER 479
            MARTKQTARKSTGGKAPRKQLATK ARKSAP TGGVKKPHRYRPGTVALREIR+Y KSTELLI KLPF RL+REIAQDFKTDLRFQS A++ALQ+A E+YLVGLFEDTNLC IHAKRVTIMPKDIQLAR+IRGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTIMPKDIQLARRIRGER 135
[Close]
BLAST of EY664319 vs. ExPASy Swiss-Prot
Match: H3L_XENLA (Histone H3-like OS=Xenopus laevis PE=1 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 7.339e-62
Identity = 119/135 (88.15%), Postives = 126/135 (93.33%), Query Frame = 3 
Query:   75 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIMKLPFHRLVREIAQDFKTDLRFQSHALLALQDAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARKIRGER 479
            MARTKQTARKSTGGKAPRKQL TKAA+K AP TGGVKKPHRYRPGTVALREIR+Y KSTELLI KLPF RLVREIAQDFKTDLRFQ  A++ALQ+A+EAYLV LFEDTNLCAIHAKRVTIMPKDIQLAR+IRGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLVTKAAKKCAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQRSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
[Close]
BLAST of EY664319 vs. ExPASy Swiss-Prot
Match: H33_CHLRE (Histone H3 type 3 OS=Chlamydomonas reinhardtii GN=ch3-IV PE=1 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 7.339e-62
Identity = 123/135 (91.11%), Postives = 128/135 (94.81%), Query Frame = 3 
Query:   75 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIMKLPFHRLVREIAQDFKTDLRFQSHALLALQDAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARKIRGER 479
            MARTKQTARKSTGGKAPRKQLATKAARK+ P TGGVKKPHRYRPGTVALREIRKY KSTELLI KLPF RLVREIAQDFKTDLRFQS A++ALQ+AAEAYLVGLFEDTNLCAI AKRVTIMPKDIQLAR+IRGER
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKT-PATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSQAVVALQEAAEAYLVGLFEDTNLCAITAKRVTIMPKDIQLARRIRGER 134
The following BLAST results are available for this feature:
BLAST of EY664319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H32_CHLRE2.281e-6392.59Histone H3 type 2 OS=Chlamydomonas reinhardtii GN=... [more]
H3_STRPU3.891e-6390.37Histone H3, embryonic OS=Strongylocentrotus purpur... [more]
H32_LILLO3.891e-6390.37Histone H3.2 OS=Lilium longiflorum GN=YAH3 PE=1 SV... [more]
H3_CAEEL5.082e-6389.63Histone H3 OS=Caenorhabditis elegans GN=his-2 PE=1... [more]
H3L1_ARATH5.082e-6390.37Histone H3-like 1 OS=Arabidopsis thaliana GN=At1g1... [more]
H31_CHLRE5.082e-6391.85Histone H3 type 1 OS=Chlamydomonas reinhardtii GN=... [more]
H3_GRIJA6.638e-6388.89Histone H3 OS=Griffithsia japonica PE=2 SV=3[more]
H31T_HUMAN8.669e-6388.89Histone H3.1t OS=Homo sapiens GN=HIST3H3 PE=1 SV=3[more]
H3L_XENLA7.339e-6288.15Histone H3-like OS=Xenopus laevis PE=1 SV=2[more]
H33_CHLRE7.339e-6291.11Histone H3 type 3 OS=Chlamydomonas reinhardtii GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-065-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664319 ID=EY664319; Name=EY664319; organism=Citrus sinensis; type=EST; length=918bp
CAGGTTCTGGTCCGGNATTCCCGGCTCGACCCAGCGTCCGGAGAATTGTG
TGGAAGAGTTGAAGAAACTCAGCGATGGCCCGTACCAAGCAAACTGCACG
TAAGTCAACCGGAGGAAAGGCTCCTAGGAAGCAACTTGCTACCAAGGCCG
CCCGTAAGTCTGCGCCCACCACCGGTGGTGTTAAGAAGCCTCATCGTTAC
CGTCCTGGAACCGTCGCCCTTCGAGAAATTCGCAAGTACCACAAGAGTAC
CGAGCTGCTTATCATGAAACTCCCATTCCACAGACTTGTTCGTGAAATTG
CTCAGGACTTTAAGACTGATCTGCGTTTCCAGAGCCATGCATTACTGGCC
CTGCAGGATGCAGCGGAGGCTTACCTTGTTGGTCTCTTCGAGGACACTAA
CCTCTGCGCCATTCATGCAAAGCGTGTCACTATTATGCCCAAGGACATAC
AGCTTGCCCGTAAGATCCGTGGCGAGCGTGCTTAAGCGTAATTGCTGCTT
GCTTCAATTGAATGACTGGAAGGGAAGGGGGAAGTTGTAATGTGTTAATT
TGTACGTGGGGGTTGGTGGGGGTAATAAGGGTTAAGGATTCCCACTGCTC
ATTAAAATATGGCTCCTGTCATCATGTGTGGTTGATCTTGGNGGGTGTGC
CATAATGTCTATTTGATGAAGACGGGGATTATAATATCGTCTAAGAGACT
GGCTATTGTGTGTACTATTGGATACCAGTTGCCACAATAATGGGGGAAGA
TGAACATCCGTATTATTTTGCTTCGATACTAAGTTANTATGGACTGTAGT
TGAGATTTATGAATTGGTAAACGTTCTAGCTGAAACAAAAAAATATTGAA
GGTTCGGTCGACTAAAGAAACAAAAGACGGACGCTTAAAGAACCAATTAC
GTTCCCTGCGTGCCCGAA
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