CX671290
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBB (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=glyA PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.436e-44 Identity = 94/209 (44.98%), Postives = 135/209 (64.59%), Query Frame = 3 Query: 189 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAA 815 D EI +IE E RQ G+ELI SEN S +VM+A+GS +TNKY+EGYPG RYYGG +D E + ++RA E F + NVQ SGS +N VY +L+ D ++ +DL HGGHL+HG ++ F + Y +++ T I+YD + + A +PKLIVAGASAY+R+ D+++ R++C++ A ++ DMAHI+GLVAA Sbjct: 10 DNEIYALIEKELERQQNGIELIASENVASEAVMEAMGSYLTNKYAEGYPGKRYYGGCYVVDGVEEIARERAKELFGAE----HANVQPHSGSQANMAVYFTILEHGDTVLGMDLSHGGHLTHG-----SPVNFSGKLFNFVSYGVDKDTEEINYDVVRELAIKHKPKLIVAGASAYSRIIDFKKFREICDEIGAYLMVDMAHIAGLVAA 209
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_CLAMS (Serine hydroxymethyltransferase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=glyA PE=3 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 4.436e-44 Identity = 98/221 (44.34%), Postives = 135/221 (61.09%), Query Frame = 3 Query: 159 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 821 + NAPL VDPEIA ++E E RQ LE+I SENF +V+Q+ GSV+TNKY+EGYPG RYYGG E++D+AE L RA F + NVQ SG+ +N V A+ +P D I+ L+L HGGHL+HG K++ ++ Y ++ T ID D + + A RP++I+AG SAY R D+ R + ++ A + DMAH +GLVAAGV Sbjct: 5 QSFNAPLSEVDPEIAAVLEQELGRQRGTLEMIASENFVPRAVLQSQGSVLTNKYAEGYPGRRYYGGCEFVDVAEQLAIDRAKSLFGAE----FANVQPHSGATANAAVLAAIAQPGDTILGLELAHGGHLTHG-----MKLNFSGKLYDAAAYGVDPDTFLIDMDVVREKALEHRPQVIIAGWSAYPRHLDFAAFRSIADEVGAKLWVDMAHFAGLVAAGV 216
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_AGRVS (Serine hydroxymethyltransferase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=glyA PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.436e-44 Identity = 94/213 (44.13%), Postives = 136/213 (63.85%), Query Frame = 3 Query: 174 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVA 812 PL DP+I IE E RQ +ELI SEN S +V++A GS+MTNKY+EGYPG RYYGG +++D+AE L +RA + F ++ NVQ SGS N V+ ALL+P D M LDL GGHL+HG ++ +F + Y + + +D D + +SA +PKLI+AG +AY+R++D++R R++ ++ A ++ DMAHI+GLVA Sbjct: 11 PLAETDPDIFGAIEKELGRQRHEIELIASENIVSRAVLEAQGSIMTNKYAEGYPGKRYYGGCQFVDIAEELAIERAKKLFGVN----FANVQPNSGSQMNQAVFLALLQPGDTFMGLDLNSGGHLTHG-----SPVNMSGKWFNVVSYGVRQDDNLLDMDAVAESARKHKPKLIIAGGTAYSRIWDWKRFREIADEVGAYLMVDMAHIAGLVA 214
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA2_SULDN (Serine hydroxymethyltransferase 2 OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=glyA2 PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.436e-44 Identity = 102/213 (47.89%), Postives = 134/213 (62.91%), Query Frame = 3 Query: 177 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAA 815 LE D E+ IIE E RQ LE+I SENFTS +VM+A+GSV TNKY+EGYP RYYGG EY D E L RA E F NVQ SGS +N VY ALLK D+++ +DL HGGHL+HG K S + + Y + E+ G +DYD++ + A +PK+IV GASAYAR D+++ R++ + A + AD+AH++GLVAA Sbjct: 9 LEHADREVFSIIEGELKRQTAHLEMIASENFTSPAVMEAMGSVFTNKYAEGYPYKRYYGGCEYADAVEQLAIDRACEIFGCK----FANVQPHSGSQANAAVYAALLKAGDKLLGMDLSHGGHLTHG-----SKPSFSGQNYSSFTYGV-EADGRMDYDKILEIAKAVQPKIIVCGASAYAREIDFKKFREIADAVGAFLFADIAHVAGLVAA 211
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_SYMTH (Serine hydroxymethyltransferase OS=Symbiobacterium thermophilum GN=glyA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.794e-44 Identity = 93/214 (43.46%), Postives = 136/214 (63.55%), Query Frame = 3 Query: 177 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 818 L+ DPE+ I+ E RQ + +ELI SENF +V++A G+V+TNKY+EGYPG RYYGG EY+D+ E++ ++R AF + VNVQ SG+ +N VY A L+P D ++ ++L GGHL+HG ++ + +PY L+ T I+ DQ+ + A RPKLIVAG SAY R+ D++R R++ + AI++ DMAH +GL A G Sbjct: 4 LKRYDPEVFAAIQQEVERQQRNIELIASENFVPKAVLEAAGTVLTNKYAEGYPGRRYYGGCEYVDIVENIARERLKAAFGAE----HVNVQPHSGANANTAVYFAFLQPGDTVLGMNLAQGGHLTHG-----SPVNFSGRTYNFVPYGLDPETERINMDQVAELARQHRPKLIVAGYSAYPRVLDFKRFREIAEEVGAILMVDMAHFAGLAATG 208
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_ROSCS (Serine hydroxymethyltransferase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=glyA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.794e-44 Identity = 93/211 (44.08%), Postives = 132/211 (62.56%), Query Frame = 3 Query: 189 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 821 DP +A II+ E RQ GLELI SEN+ S +VM+A GS +TNKY+EGYPGARYYGG E++D E L + R E F + NVQ SGS +N VY L+P D+++ ++L HGGHL+HG ++ + + Y ++ T IDYDQ+ + A RPK+I GASAY+R D+ R++ ++ A + AD+AH +GL+A G+ Sbjct: 11 DPAVARIIDGEMRRQRDGLELIASENYASRAVMEAQGSALTNKYAEGYPGARYYGGCEWVDQVEDLARARVKELFGAE----YANVQPHSGSQANMAVYFTFLRPGDKVLGMNLAHGGHLTHG-----SPVNFSGQLYTFVAYGIDPKTERIDYDQVAEIARRERPKMITVGASAYSRAIDFAIFRQIADEVGAFLFADIAHPAGLIAKGL 212
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_PROMH (Serine hydroxymethyltransferase OS=Proteus mirabilis (strain HI4320) GN=glyA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.794e-44 Identity = 94/211 (44.55%), Postives = 134/211 (63.51%), Query Frame = 3 Query: 189 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 821 DPE+ + +E E RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L RA F D NVQ SGS +N VY ALLKP D ++ ++L GGHL+HG ++ + +PY ++E+ G IDY + + A +PK+I+ G SAY+ L D+ ++R++ + A + DMAH++G++AAGV Sbjct: 12 DPELWNAMEGEVTRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKALFGAD----YANVQPHSGSQANAAVYMALLKPGDTVLGMNLAQGGHLTHG-----SPVNFSGKLYNIVPYGIDEA-GKIDYQDIAEQAKKHKPKMIIGGFSAYSGLVDWAKMREIADSVGAYLFVDMAHVAGMIAAGV 212
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_MYCHJ (Serine hydroxymethyltransferase OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=glyA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.794e-44 Identity = 96/214 (44.86%), Postives = 138/214 (64.49%), Query Frame = 3 Query: 177 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 818 +++ D +I+++I E RQ +ELI SEN+ S V+ A G+ +NKY EGYPG RYYGG +ID E + +R + F+++ NVQ SGS +N V+ ALLKP D+I+ LDL GGHLSHGY KI+ +F+ + Y L+E+ +DYD +EK A +P LI+ G SAY+R D+ R R++ +K A +LAD+AHI+GL+AAG Sbjct: 5 IKLRDQQISELINLESKRQNSQIELIASENYASEDVILANGTSPSNKYGEGYPGKRYYGGCTFIDQIEKIAIERVKKLFKIE----YANVQPYSGSSANAAVFAALLKPGDKILGLDLNAGGHLSHGY-----KINFSGMFYSGISYFLDENE-LLDYDAIEKIALKTKPNLIICGYSAYSRKIDFARFRQIADKVNAFLLADIAHIAGLIAAG 208
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_MYCH7 (Serine hydroxymethyltransferase OS=Mycoplasma hyopneumoniae (strain 7448) GN=glyA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.794e-44 Identity = 95/214 (44.39%), Postives = 139/214 (64.95%), Query Frame = 3 Query: 177 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 818 +++ D +I+++I E RQ +ELI SEN+ S V+ A G+ ++NKY EGYPG RYYGG +ID E + +R + F+++ NVQ SGS +N V+ ALLKP D+I+ LDL GGHLSHGY KI+ +F+ + Y L+E+ +DY+ +EK A +P LI+ G SAY+R D+ R R++ +K A +LAD+AHI+GL+AAG Sbjct: 5 IKLRDQQISELINLESKRQNSQIELIASENYASEDVILANGTSLSNKYGEGYPGKRYYGGCTFIDQIEKIAIERVKKLFKIE----YANVQPYSGSSANAAVFAALLKPGDKILGLDLNAGGHLSHGY-----KINFSGMFYSGISYFLDENE-LLDYEAIEKIALKTKPNLIICGYSAYSRKIDFARFRQIADKVNAFLLADIAHIAGLIAAG 208
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_MYCCT (Serine hydroxymethyltransferase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=glyA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.794e-44 Identity = 94/212 (44.34%), Postives = 138/212 (65.09%), Query Frame = 3 Query: 186 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 821 ++ +I + + E RQ +ELI SEN+ S +V++ GSV+TNKY+EGYPG RYYGG E+ID ESL + A E F + N+Q SGS +N Y ALL+P DR++A+ L GGHL+HGY I+ ++ Y +N+ T +DY ++E+ +PKLIVAGASAY+R+ D+++ +++ +K A ++ DMAHI+GLVAAGV Sbjct: 5 INSKIRESLNKELKRQQSHIELIASENYVSQAVLELNGSVLTNKYAEGYPGKRYYGGCEFIDEIESLGIQTAKELFHAE----HANIQPHSGSQANDAAYKALLEPKDRVVAMGLDAGGHLTHGY-----PINFSGYTYDFRFYGVNKDTEQLDYQEIEQIVLEHKPKLIVAGASAYSRIIDFKKFKEIADKVGAYLMVDMAHIAGLVAAGV 207 The following BLAST results are available for this feature:
BLAST of CX671290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671290 ID=CX671290; Name=CX671290; organism=Citrus sinensis; type=EST; length=822bpback to top |