CX671290
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_MYXXD (Serine hydroxymethyltransferase OS=Myxococcus xanthus (strain DK 1622) GN=glyA PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.507e-49 Identity = 107/215 (49.77%), Postives = 140/215 (65.12%), Query Frame = 3 Query: 177 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 821 L VDPEIA ++ E RQ +GLELI SENF S +VM+AVGSV+TNKY+EGYPG RYYGG E +D+AE+L RA + F D VNVQ+ SGS +N + AL+KP D +++LDL GGHL+HG + ++ + Y L T ID+ Q+E A +PK+IV GASAY R D+ + R++ + A ML DMAHI+GLVAAGV Sbjct: 7 LAEVDPEIARVLREETQRQEEGLELIASENFVSPAVMEAVGSVLTNKYAEGYPGKRYYGGCEVVDVAENLAIARAKDLFGAD----AVNVQAHSGSQANMGAFMALMKPGDTMLSLDLNSGGHLTHG-----ATFNFSGKLYKVVHYGLTRDTETIDFAQVESLAKEHKPKVIVVGASAYPRTLDFAKFREIADAVGAAMLVDMAHIAGLVAAGV 212
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_CHLPB (Serine hydroxymethyltransferase OS=Chlorobium phaeobacteroides (strain BS1) GN=glyA PE=3 SV=2) HSP 1 Score: 194.897 bits (494), Expect = 4.580e-49 Identity = 108/215 (50.23%), Postives = 143/215 (66.51%), Query Frame = 3 Query: 177 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 821 L+ D I D I E RQ + LELI SENF S +VM+A GSVMTNKY+EGYPG RYYGG E++D+AE+L + RA + F D VNVQ SGS +N V A+LKP DRIM LDL HGGHL+HG K++ FE Y ++ TG ID +++E+ A RPKLI+ GASAY++ +D++ R V +K A ++AD+AH +GL+AAG+ Sbjct: 6 LQRQDKGIFDAITAEVRRQTETLELIASENFASRAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDIAENLARDRAKKLFGCD----YVNVQPHSGSSANMGVLFAVLKPGDRIMGLDLSHGGHLTHG-----SKVNFSGQLFEAHSYGVDRETGCIDMNKVEEMALEVRPKLIICGASAYSQGFDFKAFRDVADKVGAFLMADIAHPAGLIAAGL 211
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_ACIRA (Serine hydroxymethyltransferase OS=Acinetobacter radioresistens GN=glyA PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.580e-49 Identity = 103/218 (47.25%), Postives = 140/218 (64.22%), Query Frame = 3 Query: 168 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 821 N + DPE+A I +E ARQ +ELI SEN+ S +VM+A GS +TNKY+EGYPG RYYGG EY+D+ E L RA E F D NVQ +GS +N VY ALL P D ++ + L HGGHL+HG K+S + + Y LN TG IDY+++E+ A +P++IVAG SAY+++ D++R R + +K A + DMAH++GLVAAGV Sbjct: 4 NISIAEFDPELAQAITNEDARQEAHIELIASENYCSPAVMEAQGSKLTNKYAEGYPGKRYYGGCEYVDIIEQLAIDRAKELFGAD----YANVQPHAGSQANSAVYLALLNPGDTVLGMSLAHGGHLTHG-----AKVSFSGKTYNAIQYGLNPETGEIDYEEVERLALEHKPRMIVAGFSAYSQIVDWQRFRDIADKIGAYLFVDMAHVAGLVAAGV 212
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_PORGI (Serine hydroxymethyltransferase OS=Porphyromonas gingivalis GN=glyA PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.981e-49 Identity = 101/211 (47.87%), Postives = 138/211 (65.40%), Query Frame = 3 Query: 189 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 821 D I D+IE E RQ KG+ELI SENF S VMQA+GS MTNKY+EGYPG RYYGG E +D +E + R + + + W NVQ SG+ +N V A L+ D M L+L HGGHLSHG +++ I + + Y L+E TG +DYD +EK A +PKLI+ G SAY+R +DY+R+R++ +K A+++ DMAH +GL+AAG+ Sbjct: 4 DSVIFDLIEKEHQRQLKGIELIASENFVSEQVMQAMGSCMTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRIKQLYGAE---W-ANVQPHSGAQANMAVLLACLEAGDTFMGLNLEHGGHLSHG-----SLVNSSGILYRPIGYNLSEETGMVDYDHMEKMAIEHKPKLIIGGGSAYSREWDYKRMREIADKVGALLMIDMAHPAGLIAAGL 205
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_PORG3 (Serine hydroxymethyltransferase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=glyA PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.981e-49 Identity = 101/211 (47.87%), Postives = 138/211 (65.40%), Query Frame = 3 Query: 189 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 821 D I D+IE E RQ KG+ELI SENF S VMQA+GS MTNKY+EGYPG RYYGG E +D +E + R + + + W NVQ SG+ +N V A L+ D M L+L HGGHLSHG +++ I + + Y L+E TG +DYD +EK A +PKLI+ G SAY+R +DY+R+R++ +K A+++ DMAH +GL+AAG+ Sbjct: 4 DSVIFDLIEKEHQRQLKGIELIASENFVSEQVMQAMGSCMTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRIKQLYGAE---W-ANVQPHSGAQANMAVLLACLEAGDTFMGLNLEHGGHLSHG-----SLVNSSGILYRPIGYNLSEETGMVDYDHMEKMAIEHKPKLIIGGGSAYSREWDYKRMREIADKVGALLMIDMAHPAGLIAAGL 205
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_HELMI (Serine hydroxymethyltransferase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=glyA PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.981e-49 Identity = 101/215 (46.98%), Postives = 141/215 (65.58%), Query Frame = 3 Query: 177 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 821 L VDPE+A ++ EK RQ +ELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG E++D E L +RA F + NVQ SG+ +N VY A L+P D ++ ++L HGGHL+HG ++ +F + Y ++ TG IDYD++ + A +PKLIVAGASAY R+ D+ R R + ++ A+++ DMAHI+GLVAAG+ Sbjct: 7 LHQVDPEVAAAMDREKKRQKNNIELIASENFVSEAVMEAAGSVLTNKYAEGYPGKRYYGGCEFVDQVERLAIERAKRLFGAE----HANVQPHSGANANMGVYFACLEPGDTVLGMNLAHGGHLTHG-----SPVNISGKYFRFVAYGVDAHTGRIDYDEVARIARETKPKLIVAGASAYPRVLDFARFRAIADEVGAMLMVDMAHIAGLVAAGL 212
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_GEOTN (Serine hydroxymethyltransferase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=glyA PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.981e-49 Identity = 99/211 (46.92%), Postives = 140/211 (66.35%), Query Frame = 3 Query: 189 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 821 DP++ IE E+ RQ +ELI SENF S +VM+A GSVMTNKY+EGYPG RYYGG EY+D+ E L ++RA + F + NVQ SG+ +N VY +LKP D ++ ++L HGGHL+HG ++ + + + Y ++ T IDYD + + A L RPKLIVAGASAY R+ D+ + R++ ++ A ++ DMAHI+GLVAAG+ Sbjct: 8 DPQVFATIEQERKRQHAKIELIASENFVSRAVMEAQGSVMTNKYAEGYPGRRYYGGCEYVDVVEDLARERAKQLFGAE----HANVQPHSGAQANMAVYFTVLKPGDTVLGMNLSHGGHLTHG-----SPVNFSGVQYNFVEYGVDPETHVIDYDDVREKARLHRPKLIVAGASAYPRVIDFAKFREIADEVGAYLMVDMAHIAGLVAAGL 209
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBJ (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=glyA PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.981e-49 Identity = 99/215 (46.05%), Postives = 147/215 (68.37%), Query Frame = 3 Query: 177 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 821 L+ DPE+ D+I+ E+ RQ +ELI SENFTS+SVM+A+GS++TNKY+EGYP RYYGG E++D E L ++R + F + NVQ SGS +N VY ++L+ D I+ +DL HGGHL+HG ++ + + Y +++ T IDY++L+K A RPK+IV+GASAY R+ D+++IR++C++ A M+ DMAHI+GLVA G+ Sbjct: 6 LKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTHG-----SPVNFSGKLYNFISYGVDKETETIDYEKLKKIALENRPKMIVSGASAYPRIIDFQKIREICDEIDAYMMVDMAHIAGLVATGL 211
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_ACIC5 (Serine hydroxymethyltransferase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=glyA PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.981e-49 Identity = 98/219 (44.75%), Postives = 142/219 (64.84%), Query Frame = 3 Query: 162 QLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAG 818 +++ L DP++A I+HE RQ +GLE+I SENF S +V++A GSV TNKY+EGYPG RYYGG E+ D+ E+L + RA + F + NVQ SGS +N Y ++++P D I+ LDL HGGHL+HG+ K++ + Y + + T IDYD+LE A +PK+I+ G SAY R++D+ R+R++ +K A +L DMAH +GLVA G Sbjct: 4 RMSLSLAQSDPDVAAAIDHEVLRQHEGLEMIASENFVSRAVLEAAGSVFTNKYAEGYPGRRYYGGCEFADVVENLARDRAKQLFGAE----HANVQPHSGSQANAAAYMSIIQPGDTILGLDLAHGGHLTHGH-----KLNFSGKLYRVASYGVRKDTETIDYDELEAIAVREQPKMIIGGGSAYPRIFDFARMRQIADKVGAFLLVDMAHFAGLVAGG 213
BLAST of CX671290 vs. ExPASy Swiss-Prot
Match: GLYA_ACIC1 (Serine hydroxymethyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=glyA PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.981e-49 Identity = 98/217 (45.16%), Postives = 141/217 (64.98%), Query Frame = 3 Query: 171 APLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGV 821 A L DP IAD+I E+ RQ + + LIPSEN+ S +V++A G+V+TNKYSEGYP RYY G ++ID E++ +RA + F +D NVQ SGSP+N +Y ALL P D +M + LP GGHL+HG+ +SA I+F ++ Y + TG ID+D++ + A RPK+I AG +A R+ D+ ++ + A+++AD+AHISGLVA GV Sbjct: 9 AALTATDPTIADLIRAEERRQSEKIRLIPSENYVSKAVLEATGTVLTNKYSEGYPNRRYYEGQQFIDQIETIAIERAKQLFGVD----HANVQPYSGSPANLAIYLALLSPGDTVMGMALPMGGHLTHGW-----PVSATGIWFRSVQYGVRRDTGRIDFDEVREVARRERPKVIFAGGTAIPRIIDFAAFAEIAREVNAVLVADIAHISGLVAGGV 216 The following BLAST results are available for this feature:
BLAST of CX671290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671290 ID=CX671290; Name=CX671290; organism=Citrus sinensis; type=EST; length=822bpback to top |