EY692461

Overview
NameEY692461
Unique NameEY692461
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length352
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11139 contig Csv1_Contig11139:150..501. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692461 vs. ExPASy Swiss-Prot
Match: LEU3_BURTA (3-isopropylmalate dehydrogenase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=leuB PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.328e-31
Identity = 67/92 (72.83%), Postives = 76/92 (82.61%), Query Frame = 2
Query:    2 SASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAVVAAL 277
            SASLD NNKG+YEP HGSAPDIAG+GIANPLATILS +M+LRYS N  + AD IE+AV  VL+QG RTGDI + GC +VGT  MGDAVVAAL
Sbjct:  264 SASLDKNNKGLYEPSHGSAPDIAGKGIANPLATILSAAMLLRYSLNRAEQADRIERAVKTVLEQGYRTGDIATPGCRQVGTAAMGDAVVAAL 355          
BLAST of EY692461 vs. ExPASy Swiss-Prot
Match: LEU3_BURM1 (3-isopropylmalate dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=leuB PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.328e-31
Identity = 67/92 (72.83%), Postives = 76/92 (82.61%), Query Frame = 2
Query:    2 SASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAVVAAL 277
            SASLD NNKG+YEP HGSAPDIAG+GIANPLATILS +M+LRYS N  + AD IE+AV  VL+QG RTGDI + GC +VGT  MGDAVVAAL
Sbjct:  264 SASLDKNNKGLYEPSHGSAPDIAGKGIANPLATILSAAMLLRYSLNRAEQADRIERAVKTVLEQGYRTGDIATPGCKQVGTAAMGDAVVAAL 355          
BLAST of EY692461 vs. ExPASy Swiss-Prot
Match: LEU3_RALSO (3-isopropylmalate dehydrogenase OS=Ralstonia solanacearum GN=leuB PE=3 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 2.266e-31
Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 2
Query:    2 SASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAVVAAL 277
            SASLDANNKG+YEP HGSAPDIAG+GIANPLATILS +MMLRY+    + AD IE AV  VL QG RTGDI + GC +VGT EMGDAVVAAL
Sbjct:  265 SASLDANNKGLYEPSHGSAPDIAGKGIANPLATILSAAMMLRYTLGKAEQADRIENAVKKVLAQGYRTGDILTPGCKQVGTVEMGDAVVAAL 356          
BLAST of EY692461 vs. ExPASy Swiss-Prot
Match: LEU3_RALME (3-isopropylmalate dehydrogenase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=leuB PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.048e-31
Identity = 66/92 (71.74%), Postives = 76/92 (82.61%), Query Frame = 2
Query:    2 SASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAVVAAL 277
            SASLDANNKG+YEP HGSAPDIAG+G+ANPLATILS +MMLRYS N  + AD IE AV  VL QG RT DI + GC +VGT+EMG+AV+AAL
Sbjct:  264 SASLDANNKGLYEPSHGSAPDIAGKGVANPLATILSAAMMLRYSLNRAEQADRIENAVKKVLAQGYRTADIVTPGCKQVGTREMGEAVLAAL 355          
BLAST of EY692461 vs. ExPASy Swiss-Prot
Match: LEU3_BURPS (3-isopropylmalate dehydrogenase OS=Burkholderia pseudomallei GN=leuB PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.593e-31
Identity = 66/92 (71.74%), Postives = 75/92 (81.52%), Query Frame = 2
Query:    2 SASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAVVAAL 277
            SASLD  NKG+YEP HGSAPDIAG+GIANPLATILS +M+LRYS N  + AD IE+AV  VL+QG RTGDI + GC +VGT  MGDAVVAAL
Sbjct:  264 SASLDQRNKGLYEPSHGSAPDIAGKGIANPLATILSAAMLLRYSLNRAEQADRIERAVKAVLEQGYRTGDIATPGCKQVGTAAMGDAVVAAL 355          
BLAST of EY692461 vs. ExPASy Swiss-Prot
Match: LEU3_BURP1 (3-isopropylmalate dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=leuB PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.593e-31
Identity = 66/92 (71.74%), Postives = 75/92 (81.52%), Query Frame = 2
Query:    2 SASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAVVAAL 277
            SASLD  NKG+YEP HGSAPDIAG+GIANPLATILS +M+LRYS N  + AD IE+AV  VL+QG RTGDI + GC +VGT  MGDAVVAAL
Sbjct:  264 SASLDQRNKGLYEPSHGSAPDIAGKGIANPLATILSAAMLLRYSLNRAEQADRIERAVKAVLEQGYRTGDIATPGCKQVGTAAMGDAVVAAL 355          
BLAST of EY692461 vs. ExPASy Swiss-Prot
Match: LEU3_BURMA (3-isopropylmalate dehydrogenase OS=Burkholderia mallei GN=leuB PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.593e-31
Identity = 66/92 (71.74%), Postives = 75/92 (81.52%), Query Frame = 2
Query:    2 SASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAVVAAL 277
            SASLD  NKG+YEP HGSAPDIAG+GIANPLATILS +M+LRYS N  + AD IE+AV  VL+QG RTGDI + GC +VGT  MGDAVVAAL
Sbjct:  264 SASLDQRNKGLYEPSHGSAPDIAGKGIANPLATILSAAMLLRYSLNRAEQADRIERAVKAVLEQGYRTGDIATPGCKQVGTAAMGDAVVAAL 355          
BLAST of EY692461 vs. ExPASy Swiss-Prot
Match: LEU3_BURS3 (3-isopropylmalate dehydrogenase OS=Burkholderia sp. (strain 383) GN=leuB PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.469e-30
Identity = 67/92 (72.83%), Postives = 75/92 (81.52%), Query Frame = 2
Query:    2 SASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAVVAAL 277
            SASLD NNKG+YEP HGSAPDIAG+GIANPLATILS +MMLRYS N  + AD IE+AV  VL+QG RTGDI + G  +VGT  MGDAVVAAL
Sbjct:  264 SASLDKNNKGLYEPSHGSAPDIAGKGIANPLATILSAAMMLRYSLNRAEQADRIERAVKTVLEQGYRTGDIATPGGQQVGTTAMGDAVVAAL 355          
BLAST of EY692461 vs. ExPASy Swiss-Prot
Match: LEU3_SACD2 (3-isopropylmalate dehydrogenase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=leuB PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.581e-30
Identity = 65/92 (70.65%), Postives = 75/92 (81.52%), Query Frame = 2
Query:    2 SASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAVVAAL 277
            SASL+ ++KG+YEP HGSAPDIAGQG+ANPLATILS +MMLRYS N   AADAIE AV  VLD GLR+ DI+S+G  KV TQEMGDAV A +
Sbjct:  266 SASLNQDSKGLYEPVHGSAPDIAGQGVANPLATILSAAMMLRYSLNEAAAADAIEAAVGAVLDDGLRSADIFSEGMKKVSTQEMGDAVAAKI 357          
BLAST of EY692461 vs. ExPASy Swiss-Prot
Match: LEU31_DECAR (3-isopropylmalate dehydrogenase 1 OS=Dechloromonas aromatica (strain RCB) GN=leuB1 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 7.289e-30
Identity = 64/92 (69.57%), Postives = 75/92 (81.52%), Query Frame = 2
Query:    2 SASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAVVAAL 277
            SASLD  NKG+YEP HGSAPDIAG+G+ANPLATILS +MMLRY+F L + A  +E AV  VL QG RTGDI+ +G  KVGT+EMGDAV+AAL
Sbjct:  259 SASLDDKNKGLYEPSHGSAPDIAGKGVANPLATILSAAMMLRYTFGLEEQALRVENAVKKVLAQGYRTGDIYERGTNKVGTREMGDAVLAAL 350          
The following BLAST results are available for this feature:
BLAST of EY692461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 261
Match NameE-valueIdentityDescription
LEU3_BURTA1.328e-3172.833-isopropylmalate dehydrogenase OS=Burkholderia th... [more]
LEU3_BURM11.328e-3172.833-isopropylmalate dehydrogenase OS=Burkholderia mu... [more]
LEU3_RALSO2.266e-3173.913-isopropylmalate dehydrogenase OS=Ralstonia solan... [more]
LEU3_RALME5.048e-3171.743-isopropylmalate dehydrogenase OS=Ralstonia metal... [more]
LEU3_BURPS6.593e-3171.743-isopropylmalate dehydrogenase OS=Burkholderia ps... [more]
LEU3_BURP16.593e-3171.743-isopropylmalate dehydrogenase OS=Burkholderia ps... [more]
LEU3_BURMA6.593e-3171.743-isopropylmalate dehydrogenase OS=Burkholderia ma... [more]
LEU3_BURS31.469e-3072.833-isopropylmalate dehydrogenase OS=Burkholderia sp... [more]
LEU3_SACD25.581e-3070.653-isopropylmalate dehydrogenase OS=Saccharophagus ... [more]
LEU31_DECAR7.289e-3069.573-isopropylmalate dehydrogenase 1 OS=Dechloromonas... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-H06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692461 ID=EY692461; Name=EY692461; organism=Citrus sinensis; type=EST; length=352bp
GTCGGCGTCCCTGGATGCCAACAACAAGGGCATGTACGAGCCGTGCCACG
GTTCTGCGCCGGACATCGCAGGGCAGGGCATTGCCAACCCGTTGGCGACC
ATTTTGTCGGTGTCGATGATGCTGCGTTACAGCTTCAACCTGACCGACGC
GGCGGATGCCATCGAAAAGGCTGTGAGCCTGGTGCTGGACCAAGGCCTGC
GCACCGGCGACATCTGGTCCCAGGGTTGCACCAAGGTCGGTACGCAAGAA
ATGGGCGACGCAGTAGTCGCCGCGCTGCGGAATCTGTAATCTCTCGGGCC
CGCTTGCAGATGTTGCTGCAAGGCGGCCCACTTTTGAACAAGGTGTAGTT
GC
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