CX671282
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671282 vs. ExPASy Swiss-Prot
Match: LH15_EUGGR (Light-harvesting complex I LH35 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.638e-19 Identity = 64/183 (34.97%), Postives = 91/183 (49.73%), Query Frame = 1 Query: 295 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLE----DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSD 831 P +LTGE P D G+DP ++ P +++ + E+ HAR +ML G I+PE K WF+ G +DG I L F ++A + EY+R G + + D+ +PG FDPL L D + +EIKNGRLAM +LG Q TGE P+ NLA H ++ Sbjct: 169 PAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELLGK--------GAWFEVGN-SVDG-----------IKLGFILMA---IAAPTEYWRGNGGFNWDKGTADRSYPG--FDPLKLTTDYTK------REIKNGRLAMTGLLGLTFQYLATGESPLANLAAHFAN 320
BLAST of CX671282 vs. ExPASy Swiss-Prot
Match: FCP_ISOGA (Fucoxanthin-chlorophyll a-c binding protein, chloroplastic OS=Isochrysis galbana GN=FCP PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.886e-11 Identity = 56/171 (32.75%), Postives = 76/171 (44.44%), Query Frame = 1 Query: 334 YDPFGLSKKPDDFSKYQAYEL--IHARWAMLGAAGFIIPEAFNK-FGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLD------------LEDKLHPGG-PFDPLGLA-KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGE 795 +DP G K D Y+ E H R AML + GF++ E F+ F + GP + IP + I + +G AE +RI G L + PG FDPLGLA DPD+F L++ KE+ +GRLAM A GF Q V+G+ Sbjct: 46 FDPAGFLKGKDKLEVYRLREAETTHGRVAMLASLGFVVQEKFHPLFSGDNGPAI-------------------EQIPQLPYWLWIVMTIGIGRAELFRIQKGWAKVNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQEAVSGD 197 The following BLAST results are available for this feature:
BLAST of CX671282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671282 ID=CX671282; Name=CX671282; organism=Citrus sinensis; type=EST; length=832bpback to top |