CX671270

Overview
NameCX671270
Unique NameCX671270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4172 contig Csv1_Contig4172:88..885. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671270 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.608e-27
Identity = 62/149 (41.61%), Postives = 93/149 (62.42%), Query Frame = -3
Query:  351 EAPDTITGDXVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRR 797
            + P    GD + +L  K+H  F R+ +DL++   + L EALCGFQ  ++ LD R ++I S+PG+I+K G  K + +EGMP ++RP+ KGRL I+F V FPE G LSPD+   LE +LP R        E D+ ++V + D + ++E RR
Sbjct:  230 QEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CX671270 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.608e-27
Identity = 62/149 (41.61%), Postives = 93/149 (62.42%), Query Frame = -3
Query:  351 EAPDTITGDXVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRR 797
            + P    GD + +L  K+H  F R+ +DL++   + L EALCGFQ  ++ LD R ++I S+PG+I+K G  K + +EGMP ++RP+ KGRL I+F V FPE G LSPD+   LE +LP R        E D+ ++V + D + ++E RR
Sbjct:  229 QEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 373          
BLAST of CX671270 vs. ExPASy Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.608e-27
Identity = 62/149 (41.61%), Postives = 93/149 (62.42%), Query Frame = -3
Query:  351 EAPDTITGDXVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRR 797
            + P    GD + +L  K+H  F R+ +DL++   + L EALCGFQ  ++ LD R ++I S+PG+I+K G  K + +EGMP ++RP+ KGRL I+F V FPE G LSPD+   LE +LP R        E D+ ++V + D + ++E RR
Sbjct:  230 QEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CX671270 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.608e-27
Identity = 62/149 (41.61%), Postives = 93/149 (62.42%), Query Frame = -3
Query:  351 EAPDTITGDXVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRR 797
            + P    GD + +L  K+H  F R+ +DL++   + L EALCGFQ  ++ LD R ++I S+PG+I+K G  K + +EGMP ++RP+ KGRL I+F V FPE G LSPD+   LE +LP R        E D+ ++V + D + ++E RR
Sbjct:  230 QEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CX671270 vs. ExPASy Swiss-Prot
Match: DNJA1_BOVIN (DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.608e-27
Identity = 62/149 (41.61%), Postives = 93/149 (62.42%), Query Frame = -3
Query:  351 EAPDTITGDXVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRR 797
            + P    GD + +L  K+H  F R+ +DL++   + L EALCGFQ  ++ LD R ++I S+PG+I+K G  K + +EGMP ++RP+ KGRL I+F V FPE G LSPD+   LE +LP R        E D+ ++V + D + ++E RR
Sbjct:  230 QEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CX671270 vs. ExPASy Swiss-Prot
Match: DNAJ1_CERAE (DnaJ homolog subfamily A member 1 OS=Cercopithecus aethiops GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.100e-27
Identity = 61/149 (40.94%), Postives = 93/149 (62.42%), Query Frame = -3
Query:  351 EAPDTITGDXVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRR 797
            + P    GD + +L  K+H  F R+ +DL++   + L EALCGFQ  ++ LD R ++I S+PG+I+K G  K + +EGMP ++RP+ KGRL I+F + FPE G LSPD+   LE +LP R        E D+ ++V + D + ++E RR
Sbjct:  230 QEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKINFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CX671270 vs. ExPASy Swiss-Prot
Match: DNJA4_MOUSE (DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.129e-23
Identity = 58/150 (38.67%), Postives = 89/150 (59.33%), Query Frame = -3
Query:  348 EAPDTITGDXVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRK 797
            + P+   GD + +L  K+H  F+R+  DL +   + L+EALCGF+  +  LD R L+I S  GE+IK G  K I +EGMP ++ P  KG + IQF V FPE   LS ++   LE++LPPR    ++    DD ++V + + N +E+  R+
Sbjct:  231 QEPELDPGDVIIVLDQKDHSVFQRRGQDLIMKMKIQLSEALCGFKKTIKTLDDRVLVISSKSGEVIKHGDLKCIRNEGMPIYKAPLEKGVMIIQFLVVFPEKQWLSQEKLPQLEALLPPRQKVRIT----DDMDQVELKEFNPNEQSWRQ 376          
BLAST of CX671270 vs. ExPASy Swiss-Prot
Match: MAS5_SCHPO (Mitochondrial protein import protein mas5 OS=Schizosaccharomyces pombe GN=SPBC1734.11 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.917e-22
Identity = 67/179 (37.43%), Postives = 91/179 (50.84%), Query Frame = -3
Query:  273 EAPDTITGDXVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRXXXXXXXXXXXXEP----AMPRVQCAQQ 797
            +AP  I GD +F++  KEHP+FKR  D L+ +  + L  AL G Q  + HLD R L I   PGE I+P + K +  +GM   QR    G LYI+F+V+FPE    +P+Q   LE  LPPR  K  S  +    EE  +  V+  E++R               +       P VQCAQQ
Sbjct:  232 QAPGIIPGDVIFVIDQKEHPRFKRSGDHLFYEAHVDLLTALAGGQIVVEHLDDRWLTIPIIPGECIRPNELKVLPGQGM-LSQRHHQPGNLYIRFHVDFPEPNFATPEQLALLEKALPPR--KIESAPKNAHTEECVLATVDPTEKVRIDNNVDPTTATSMDEDEDEEGGHPGVQCAQQ 407          
BLAST of CX671270 vs. ExPASy Swiss-Prot
Match: DNJA4_HUMAN (DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.249e-21
Identity = 55/134 (41.04%), Postives = 81/134 (60.45%), Query Frame = -3
Query:  396 EAPDTITGDXVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCE 797
            + P+   GD + +L  K+H  F+R+  DL +   + L+EALCGF+  +  LD R L+I S  GE+IK G  + + DEGMP ++ P  KG L IQF V FPE   LS ++   LE++LPPR    ++D ++D  E
Sbjct:  231 QEPELEPGDVIIVLDQKDHSVFQRRGHDLIMKMKIQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGMPIYKAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEALLPPRQKVRITD-DMDQVE 363          
BLAST of CX671270 vs. ExPASy Swiss-Prot
Match: MAS5_YEAST (Mitochondrial protein import protein MAS5 OS=Saccharomyces cerevisiae GN=YDJ1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.327e-18
Identity = 50/120 (41.67%), Postives = 68/120 (56.67%), Query Frame = -3
Query:  438 EAPDTITGDXVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPR 797
            +APD I GD VFI+  + H  FKR  DDL  +  + L  A+ G +FAL H+ G  L +   PGE+I PG  K I  +GMP  +     G L I+F ++FPE    S +  + LE +LPPR
Sbjct:  238 QAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGY-GNLIIKFTIKFPENHFTSEENLKKLEEILPPR 356          
The following BLAST results are available for this feature:
BLAST of CX671270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
DNJA1_RAT1.608e-2741.61DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]
DNJA1_PONAB1.608e-2741.61DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]
DNJA1_MOUSE1.608e-2741.61DnaJ homolog subfamily A member 1 OS=Mus musculus ... [more]
DNJA1_HUMAN1.608e-2741.61DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]
DNJA1_BOVIN1.608e-2741.61DnaJ homolog subfamily A member 1 OS=Bos taurus GN... [more]
DNAJ1_CERAE2.100e-2740.94DnaJ homolog subfamily A member 1 OS=Cercopithecus... [more]
DNJA4_MOUSE9.129e-2338.67DnaJ homolog subfamily A member 4 OS=Mus musculus ... [more]
MAS5_SCHPO5.917e-2237.43Mitochondrial protein import protein mas5 OS=Schiz... [more]
DNJA4_HUMAN2.249e-2141.04DnaJ homolog subfamily A member 4 OS=Homo sapiens ... [more]
MAS5_YEAST2.327e-1841.67Mitochondrial protein import protein MAS5 OS=Sacch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_10A07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10A07-A14-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671270 ID=CX671270; Name=CX671270; organism=Citrus sinensis; type=EST; length=799bp
GCAACAAGCATCTGAATTTATCCAATACATCAAAAAATCCAATTTAAATG
ACATAAGCATCTGATCCGCTGCTGCATATACATATGCATATGTGTGTGTA
TATAAATACTATCCACCTTCTGCCTGGTAAATAACTGCTACTGCTTGCTT
ATAATATTAATTAGCACAAAAATCATGCAGCGGTAAAAAAAACATACTAG
ATGCCAAATTGAAAATGCTCATTGCCTCTGATAGGCAAGGGGACCAGGAA
AGGCAAAATTGAATTTGCCTCATTGCTGAGCACACTGGACTCTTGGCATT
GCTGGTTCATCATCTTCATCATATGCCTCTTGCTGCTGTTGATACCGTTT
ACGCCTCATCTCTTCATCAATGTTAACATCATGCATGGTGACCTCCTCAC
AATCATCCAGCTCCATGTCAGACAGGTTCTTGCCTGGCCTCGGAGGTAGT
ACACTCTCTAAAGTCCGGCACTGATCAGGAGAAAGGATTCCACATTCCGG
AAATTCTACATTGAATTGAATGTAAAGCCTGCCTTTCATAAAGGGCCTTT
GGTGATGCGGCATTCCCTCATCGTTGATTGCTTTGTATTGACCAGGCTTA
ATGATCTCCCCAGGATTTGATTTGATCAGTAGCTGCCTCCCATCAAGATG
GGTTAAGGCAAACTGAAACCCACACAGAGCCTCAGTCAAACTGAGGGTGT
GATCAACATAAAGATCATCGAACTTCCGCTTAAACTTGGGATGCTCCTTC
AATTGCAATATGAAGACNATGTCTCCTGTGATGGTATCAGGAGCTTCAT
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