CX306607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL21_CAPHI (60S ribosomal protein L21 OS=Capra hircus GN=RPL21 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.665e-33 Identity = 73/144 (50.69%), Postives = 95/144 (65.97%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPVKLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHIQKSKCRTHFLERLVENEKHKALVRAGKATKKVLKRDPGTPNPAKFV--TGSESQNIAP 738 TR +F +PFRK G V L+TY+ Y+ GD VDIK ++ KGMPHK YHGKTGRV+NVT A+G+ +NK V +I+ KRINVR+EHI+ SK R FL+R+ EN++ K + K T LKR P P A FV G E + + P Sbjct: 11 TRYMFSRPFRKHGVVPLATYMRIYRKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKE-KGTWVQLKRQPAPPREAHFVRTNGKEPELLEP 153
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL21_MOUSE (60S ribosomal protein L21 OS=Mus musculus GN=Rpl21 PE=2 SV=3) HSP 1 Score: 138.272 bits (347), Expect = 4.300e-32 Identity = 73/144 (50.69%), Postives = 94/144 (65.28%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPVKLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHIQKSKCRTHFLERLVENEKHKALVRAGKATKKVLKRDPGTPNPAKFV--TGSESQNIAP 738 TR +F +PFRK G V L+TY+ YK GD VDIK ++ KGMPHK YHGKTGRV+NVT A+G+ +NK V +I+ KRINVR+EHI+ SK R FL+R+ EN++ K + K T LKR P A FV G E + + P Sbjct: 11 TRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKE-KGTWVQLKRHAAPPREAHFVRTNGKEPELLEP 153
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL21_RAT (60S ribosomal protein L21 OS=Rattus norvegicus GN=Rpl21 PE=1 SV=3) HSP 1 Score: 137.117 bits (344), Expect = 9.580e-32 Identity = 72/144 (50.00%), Postives = 93/144 (64.58%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPVKLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHIQKSKCRTHFLERLVENEKHKALVRAGKATKKVLKRDPGTPNPAKFV--TGSESQNIAP 738 TR +F +PFRK G V L+TY+ YK GD VDIK ++ KGMPHK YHGKTGRV+NVT A+G+ +NK V +I+ KRINVR+EHI+ SK R FL+R+ EN++ K + K T L P P A FV G E + + P Sbjct: 11 TRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKE-KGTWVQLNGQPAPPREAHFVRTNGKEPELLEP 153
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL21_CAEEL (60S ribosomal protein L21 OS=Caenorhabditis elegans GN=rpl-21 PE=1 SV=3) HSP 1 Score: 132.494 bits (332), Expect = 2.360e-30 Identity = 74/145 (51.03%), Postives = 92/145 (63.45%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPVKLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHIQKSKCRTHFLERLVEN-EKHKALVRAGKATKKVLKRDPGTPNPAKFVT--GSESQNIAP 738 TR +F + FRK G LSTY YK GD VDIK N + KGMP K YHG+TGR++NVT A+G+ +NK V I+ KRIN+R+EHI+ SKCRT FL R+ N EK KA AG+ LKR P P A VT +E + +AP Sbjct: 11 TRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGRTGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQPV-PALKRLPVAPRGAHTVTTQNNEPELLAP 154
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL21_PYUST (60S ribosomal protein L21 (Fragment) OS=Pyura stolonifera GN=RPL21 PE=2 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 8.967e-30 Identity = 66/133 (49.62%), Postives = 87/133 (65.41%), Query Frame = 1 Query: 319 DLFQQPFRKRGPVKLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHIQKSKCRTHFLERLVENEKHKALVRAGKATKKVLKRDPGTPNPAKFVTGS 717 D+F + FR+RG + L+ YL YK GD VDIK + S+ K PHK YHGKTGR++NVT A+G+ +NK V RI+ KRINVR+EHI+ SK R F++R+ ENE+ + R K + LKR P P FV S Sbjct: 12 DMFSKKFRERGAIPLNKYLTVYKKGDIVDIKGDGSVQKVCPHKVYHGKTGRIFNVTQHAVGIIVNKQVRGRIIAKRINVRIEHIKHSKSRISFIQRVHENERKRKEARE-KKIRVNLKRQPQQPRTGHFVRSS 143
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL21_ENTHI (60S ribosomal protein L21 OS=Entamoeba histolytica GN=RPL21 PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.295e-28 Identity = 66/141 (46.81%), Postives = 88/141 (62.41%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPVKLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHIQKSKCRTHFLERLVE----NEKHKALVRAGKATKKV-LKRDPGTPNPAKFVTGSE 720 TR LF++PFR G ST L YK+GDYV I N SI G+P+K +HGKTGRVWNV P AIGV +NK V NRI+ KR+++ EHI+ S C+ FLER +++ L + GK + KR P P PA+ + G++ Sbjct: 11 TRKLFKRPFRGHGLSNTSTILHTYKVGDYVTILCNSSIQHGLPYKAFHGKTGRVWNVNPHAIGVMVNKKVNNRIVVKRLHISPEHIRPSGCQKDFLERKAAVAAIRKQNIQLKKEGKPLLPLPAKRLPKQPRPAELIKGAD 151
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL21_ENCCU (60S ribosomal protein L21 OS=Encephalitozoon cuniculi GN=RPL21 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.794e-23 Identity = 50/100 (50.00%), Postives = 71/100 (71.00%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPVKLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHIQKSKCRTHFLERLV 612 TR LF Q RK G +S YLE Y+IGD VDI NP++ KGMPHK+YHG+TGRV++V PR++ V + K V + + K+I VR+EH++KS+C +R++ Sbjct: 10 TRYLFSQDHRKHGVAHVSKYLEKYEIGDMVDILVNPAMMKGMPHKYYHGRTGRVYDVKPRSLNVALYKRVRGKYVIKKIIVRIEHVRKSRCSEESQKRIL 109
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL21_SULTO (50S ribosomal protein L21e OS=Sulfolobus tokodaii GN=rpl21e PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.432e-12 Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPV-KLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHIQK 576 TR L + R+RG V +LS +E +K GDYV IK NPS+HKGMPH+ YHGK G + +A V++ +G++ +K I VR EH+ K Sbjct: 12 TRKLLTKNVRERGAVPRLSLLMEEFKEGDYVVIKINPSVHKGMPHRRYHGKVGVIQGKRGKAYIVRVT--LGDK--EKVIIVRPEHLAK 96
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL21_PIG (60S ribosomal protein L21 (Fragment) OS=Sus scrofa GN=RPL21 PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.878e-11 Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPVKLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTG 468 TR +F +PFRK G V L+TY+ YK GD VDIK ++ KG+PHK YHGKTG Sbjct: 11 TRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGLPHKCYHGKTG 62
BLAST of CX306607 vs. ExPASy Swiss-Prot
Match: RL21_SULAC (50S ribosomal protein L21e OS=Sulfolobus acidocaldarius GN=rpl21e PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.453e-11 Identity = 37/87 (42.53%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 313 TRDLFQQPFRKRGPV-KLSTYLENYKIGDYVDIKANPSIHKGMPHKFYHGKTGRVWNVTPRAIGVQINKPVGNRIMKKRINVRVEHI 570 TR L ++ R++G + KLS + +Y G+YV +K NPSIHKGMPH+ YHGK G V +A V++N +G++ ++ + VR EH+ Sbjct: 12 TRKLLEKKVREKGAIPKLSLLMHDYSQGEYVVVKINPSIHKGMPHRRYHGKVGLVVGKRGKAYEVKVN--IGDK--ERVLIVRPEHL 94 The following BLAST results are available for this feature:
BLAST of CX306607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306607 ID=CX306607; Name=CX306607; organism=Citrus sinensis; type=EST; length=742bpback to top |