CX303411
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_PLUXY (40S ribosomal protein S29 OS=Plutella xylostella GN=RpS29 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.189e-17 Identity = 33/54 (61.11%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHK 166 MGH +W SHP+ YG+GSR CR C+++ GLIRKY L++CRQCF++Y+ DIGF K Sbjct: 1 MGHANIWYSHPRKYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_GUITH (40S ribosomal protein S29A OS=Guillardia theta GN=rps29A PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.189e-17 Identity = 33/56 (58.93%), Postives = 44/56 (78.57%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHKYR 172 M H +WN H +TYGKGSR CR+C +++GLIRKY L +CRQCF++ S ++GF KYR Sbjct: 1 MSHKNIWNKHSRTYGKGSRGCRICGNRSGLIRKYGLSICRQCFREKSQNLGFDKYR 56
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_WHEAT (40S ribosomal protein S29 OS=Triticum aestivum GN=RPS29 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.200e-16 Identity = 37/56 (66.07%), Postives = 41/56 (73.21%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHKYR 172 MGH +WNSHPK YG GSR CRVC + GLIRKY L CRQCF+ + DIGF KYR Sbjct: 1 MGHSNVWNSHPKNYGAGSRVCRVCGNSHGLIRKYGLMCCRQCFRSDAKDIGFIKYR 56
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_ARATH (40S ribosomal protein S29 OS=Arabidopsis thaliana GN=RPS29A PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.200e-16 Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHKYR 172 MGH +WNSHPK YG GSR CRVC + GLIRKY L+ CRQCF+ + +IGF KYR Sbjct: 1 MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_SPOFR (40S ribosomal protein S29 OS=Spodoptera frugiperda GN=RpS29 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.567e-16 Identity = 33/54 (61.11%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHK 166 MGH +W SHP+ YG+GSR CR C+++ GLIRKY L++CRQCF++Y+ DIGF K Sbjct: 1 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_RAT (40S ribosomal protein S29 OS=Rattus norvegicus GN=Rps29 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.047e-16 Identity = 35/54 (64.81%), Postives = 46/54 (85.19%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHK 166 MGH QL+ SHP+ +G+GSR CRVC+++ GLIRKY L++CRQCF+QY+ DIGF K Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_PONAB (40S ribosomal protein S29 OS=Pongo abelii GN=RPS29 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.047e-16 Identity = 35/54 (64.81%), Postives = 46/54 (85.19%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHK 166 MGH QL+ SHP+ +G+GSR CRVC+++ GLIRKY L++CRQCF+QY+ DIGF K Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_MOUSE (40S ribosomal protein S29 OS=Mus musculus GN=Rps29 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.047e-16 Identity = 35/54 (64.81%), Postives = 46/54 (85.19%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHK 166 MGH QL+ SHP+ +G+GSR CRVC+++ GLIRKY L++CRQCF+QY+ DIGF K Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_ICTPU (40S ribosomal protein S29 OS=Ictalurus punctatus GN=rps29 PE=3 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 2.047e-16 Identity = 35/54 (64.81%), Postives = 46/54 (85.19%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHK 166 MGH QL+ SHP+ +G+GSR CRVC+++ GLIRKY L++CRQCF+QY+ DIGF K Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 54
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_HUMAN (40S ribosomal protein S29 OS=Homo sapiens GN=RPS29 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.047e-16 Identity = 35/54 (64.81%), Postives = 46/54 (85.19%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHK 166 MGH QL+ SHP+ +G+GSR CRVC+++ GLIRKY L++CRQCF+QY+ DIGF K Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54 The following BLAST results are available for this feature:
BLAST of CX303411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX303411 ID=CX303411; Name=CX303411; organism=Citrus sinensis; type=EST; length=199bpback to top |