CX303411
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_HIPCM (40S ribosomal protein S29 OS=Hippocampus comes GN=rps29 PE=3 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 2.047e-16 Identity = 35/54 (64.81%), Postives = 46/54 (85.19%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHK 166 MGH QL+ SHP+ +G+GSR CRVC+++ GLIRKY L++CRQCF+QY+ DIGF K Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 54
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_BOVIN (40S ribosomal protein S29 OS=Bos taurus GN=RPS29 PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.047e-16 Identity = 35/54 (64.81%), Postives = 46/54 (85.19%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHK 166 MGH QL+ SHP+ +G+GSR CRVC+++ GLIRKY L++CRQCF+QY+ DIGF K Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_LYSTE (40S ribosomal protein S29 OS=Lysiphlebus testaceipes GN=RpS29 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.673e-16 Identity = 33/54 (61.11%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHK 166 MG + +W SHP+ YG+GSR CR CA+K G+IRKY L++CRQCF++Y+ DIGF K Sbjct: 1 MGFENIWFSHPRKYGQGSRSCRSCANKHGIIRKYGLNICRQCFREYASDIGFKK 54
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_BOMMO (40S ribosomal protein S29 OS=Bombyx mori GN=RpS29 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.673e-16 Identity = 33/54 (61.11%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHK 166 MGH +W SHP+ YG+GSR CR C+++ GLIRKY L++CRQCF++Y+ DIGF K Sbjct: 1 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_LONON (40S ribosomal protein S29 OS=Lonomia obliqua GN=RpS29 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.733e-15 Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHK 166 MGH +W SHP+ Y +GSR CR C+++ GLIRKY L++CRQCF++Y+ DIGF K Sbjct: 1 MGHANIWYSHPRRYCQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_DROME (40S ribosomal protein S29 OS=Drosophila melanogaster GN=RpS29 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.733e-15 Identity = 33/54 (61.11%), Postives = 43/54 (79.63%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHK 166 MG LW SHP+ YG+GSR CR C+++ GLIRKY L++CRQCF++Y+ DIGF K Sbjct: 1 MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_CULQU (40S ribosomal protein S29 OS=Culex quinquefasciatus GN=RpS29 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.042e-15 Identity = 32/54 (59.26%), Postives = 42/54 (77.78%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHK 166 MG LW SHP+ YG+GSR CR C++ G+IRKY L++CRQCF++Y+ DIGF K Sbjct: 1 MGFADLWYSHPRKYGQGSRFCRACSNNHGMIRKYGLNICRQCFREYAKDIGFRK 54
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_PIG (40S ribosomal protein S29 OS=Sus scrofa GN=RPS29 PE=3 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 5.575e-14 Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHK 166 MG + SHP+ +G+GSR CRVC+++ GLIRKY L++CRQCF+QY+ DIGF K Sbjct: 1 MGPQGFYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_KLULA (40S ribosomal protein S29 OS=Kluyveromyces lactis GN=RPS29 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.575e-14 Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHKYR 172 M H+ +W SHP+ +GKGSRQCR+ +GLIRKY L++ RQ F++ + DIGF+KYR Sbjct: 1 MAHENVWYSHPRKFGKGSRQCRISGSHSGLIRKYGLNIDRQSFREKANDIGFYKYR 56
BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_SCHPO (40S ribosomal protein S29 OS=Schizosaccharomyces pombe GN=rps29 PE=2 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 7.281e-14 Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 2 Query: 5 MGHDQLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHKYR 172 M H+ +W SHP+ YGKGSRQC + GLIRKY L++ RQ F++Y+ DIGF KYR Sbjct: 1 MAHENVWFSHPRKYGKGSRQCAHTGRRLGLIRKYGLNISRQSFREYANDIGFVKYR 56 The following BLAST results are available for this feature:
BLAST of CX303411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX303411 ID=CX303411; Name=CX303411; organism=Citrus sinensis; type=EST; length=199bpback to top |