CX303411

Overview
NameCX303411
Unique NameCX303411
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length199
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX303411 vs. ExPASy Swiss-Prot
Match: RS29_DICDI (40S ribosomal protein S29 OS=Dictyostelium discoideum GN=rps29 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.900e-12
Identity = 27/52 (51.92%), Postives = 39/52 (75.00%), Query Frame = 2 
Query:   17 QLWNSHPKTYGKGSRQCRVCAHKAGLIRKYHLDLCRQCFKQYSGDIGFHKYR 172
            +LW +HP+ +G GSR CR C +  G+IRKY L++CR+CF+  +  IGF+KYR
Sbjct:    4 ELWLTHPRNFGPGSRTCRKCGNHHGIIRKYDLNMCRRCFRTDAEAIGFNKYR 55
The following BLAST results are available for this feature:
BLAST of CX303411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RS29_DICDI8.900e-1251.9240S ribosomal protein S29 OS=Dictyostelium discoid... [more]

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Properties
Property NameValue
Genbank descriptionC08030H11SK PhyRootSw1 Citrus sinensis cDNA clone C08030H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX303411 ID=CX303411; Name=CX303411; organism=Citrus sinensis; type=EST; length=199bp
CAACATGGGCCACGATCAGCTTTGGAACTCCCACCCCAAGACCTACGGAA
AGGGCTCCCGCCAGTGCCGTGTCTGCGCCCACAAGGCCGGTCTCATTCGC
AAGTACCACCTCGATCTTTGCAGGCAGTGCTTCAAGCAGTACTCTGGTGA
CATTGGTTTCCACAAGTACCGCTAATTGTTCCATCTACGTTTCAATTTG
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