CX303406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX303406 vs. ExPASy Swiss-Prot
Match: RL24_BRUMB (50S ribosomal protein L24 OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=rplX PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.932e-12 Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 54 IVKGDFVEVTQGPQKGQRGKVLAIIRKNSRAIIEGVNMRPRTVINRISGVPGKTIIRPCSIHYSNMMLIDPSDSKPTKIARRWTADGTKVRVSKRTGHII 353 I KGD V V G KG++G+VL ++ K+ +A++ G+N+ R + G I + IH SN+ + DP D KPT++ R DG KVRV+KR+G +I Sbjct: 4 IRKGDSVVVLSGKDKGRKGEVLKVMPKDEQALVSGINIVKRHQRQTQTQEAG-IISKEAPIHLSNLAIADPKDGKPTRVGFR-VEDGKKVRVAKRSGALI 101
BLAST of CX303406 vs. ExPASy Swiss-Prot
Match: RL24_BRUC2 (50S ribosomal protein L24 OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=rplX PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.932e-12 Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 54 IVKGDFVEVTQGPQKGQRGKVLAIIRKNSRAIIEGVNMRPRTVINRISGVPGKTIIRPCSIHYSNMMLIDPSDSKPTKIARRWTADGTKVRVSKRTGHII 353 I KGD V V G KG++G+VL ++ K+ +A++ G+N+ R + G I + IH SN+ + DP D KPT++ R DG KVRV+KR+G +I Sbjct: 4 IRKGDSVVVLSGKDKGRKGEVLKVMPKDEQALVSGINIVKRHQRQTQTQEAG-IISKEAPIHLSNLAIADPKDGKPTRVGFR-VEDGKKVRVAKRSGALI 101
BLAST of CX303406 vs. ExPASy Swiss-Prot
Match: RL24_BRUAB (50S ribosomal protein L24 OS=Brucella abortus GN=rplX PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.932e-12 Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 54 IVKGDFVEVTQGPQKGQRGKVLAIIRKNSRAIIEGVNMRPRTVINRISGVPGKTIIRPCSIHYSNMMLIDPSDSKPTKIARRWTADGTKVRVSKRTGHII 353 I KGD V V G KG++G+VL ++ K+ +A++ G+N+ R + G I + IH SN+ + DP D KPT++ R DG KVRV+KR+G +I Sbjct: 4 IRKGDSVVVLSGKDKGRKGEVLKVMPKDEQALVSGINIVKRHQRQTQTQEAG-IISKEAPIHLSNLAIADPKDGKPTRVGFR-VEDGKKVRVAKRSGALI 101
BLAST of CX303406 vs. ExPASy Swiss-Prot
Match: RL24_BRUA2 (50S ribosomal protein L24 OS=Brucella abortus (strain 2308) GN=rplX PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.932e-12 Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 54 IVKGDFVEVTQGPQKGQRGKVLAIIRKNSRAIIEGVNMRPRTVINRISGVPGKTIIRPCSIHYSNMMLIDPSDSKPTKIARRWTADGTKVRVSKRTGHII 353 I KGD V V G KG++G+VL ++ K+ +A++ G+N+ R + G I + IH SN+ + DP D KPT++ R DG KVRV+KR+G +I Sbjct: 4 IRKGDSVVVLSGKDKGRKGEVLKVMPKDEQALVSGINIVKRHQRQTQTQEAG-IISKEAPIHLSNLAIADPKDGKPTRVGFR-VEDGKKVRVAKRSGALI 101
BLAST of CX303406 vs. ExPASy Swiss-Prot
Match: RL24_BRUA1 (50S ribosomal protein L24 OS=Brucella abortus (strain S19) GN=rplX PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.932e-12 Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 54 IVKGDFVEVTQGPQKGQRGKVLAIIRKNSRAIIEGVNMRPRTVINRISGVPGKTIIRPCSIHYSNMMLIDPSDSKPTKIARRWTADGTKVRVSKRTGHII 353 I KGD V V G KG++G+VL ++ K+ +A++ G+N+ R + G I + IH SN+ + DP D KPT++ R DG KVRV+KR+G +I Sbjct: 4 IRKGDSVVVLSGKDKGRKGEVLKVMPKDEQALVSGINIVKRHQRQTQTQEAG-IISKEAPIHLSNLAIADPKDGKPTRVGFR-VEDGKKVRVAKRSGALI 101
BLAST of CX303406 vs. ExPASy Swiss-Prot
Match: RL24_BACWK (50S ribosomal protein L24 OS=Bacillus weihenstephanensis (strain KBAB4) GN=rplX PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.932e-12 Identity = 36/103 (34.95%), Postives = 60/103 (58.25%), Query Frame = 3 Query: 51 NIVKGDFVEVTQGPQKGQRGKVLAIIRKNSRAIIEGVNMRPRTVINRISGVPGKTIIRPCSIHYSNMMLIDPSDSKPTKIARRWTADGTKVRVSKRTGHIIPK 359 ++ KGD V+V G KG++G +L K +R I+EGVN+ + G I + IH SN+M++DP +PT++ + DG KVR++K++G ++ K Sbjct: 2 HVKKGDKVQVITGKDKGKQGVILVAFPKQNRVIVEGVNIVKKHSKPSQLNPQGGIITKEAPIHVSNVMVLDPKTGEPTRVGFK-VEDGKKVRIAKKSGELLDK 103
BLAST of CX303406 vs. ExPASy Swiss-Prot
Match: RL24_PARD8 (50S ribosomal protein L24 OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=rplX PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12 Identity = 37/101 (36.63%), Postives = 56/101 (55.45%), Query Frame = 3 Query: 51 NIVKGDFVEVTQGPQKGQRGKVLAIIRKNSRAIIEGVNMRPRTVINRISGVPGKTIIRPCSIHYSNMMLIDPSDSKPTKIARRWTADGTKVRVSKRTGHII 353 +I KGD V V G KG+ G+VL ++ K++RAI+EG+N+ + G + IH SN+ ++DP K T+I R+ G VR SK++G I Sbjct: 5 HIKKGDIVFVNAGEDKGKTGRVLQVLVKDNRAIVEGINVVSKHTKPNAKNPQGGIEKKEAPIHLSNLNVVDPKSGKATRIGRKLNEKGALVRYSKKSGEEI 105
BLAST of CX303406 vs. ExPASy Swiss-Prot
Match: RL24_CORU7 (50S ribosomal protein L24 OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=rplX PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12 Identity = 43/100 (43.00%), Postives = 56/100 (56.00%), Query Frame = 3 Query: 54 IVKGDFVEVTQGPQKGQRGKVLAIIRKNSRAIIEGVNMRPRTVINRI---SGVPGKTIIRPCSIHYSNMMLIDPSDSKPTKIARRWTADGTKVRVSKRTG 344 I KGD V V GP KG +GKV+ K + ++EGVN + V N G + + IH SN+M+ID SD PT+I R+ DG K+RVSKR G Sbjct: 3 IRKGDTVIVISGPDKGAKGKVIEAYPKRDKVLVEGVNRIKKHVANSAPERGAESGGIVTQEAPIHVSNVMVID-SDGNPTRIGYRF-EDGKKIRVSKRNG 100
BLAST of CX303406 vs. ExPASy Swiss-Prot
Match: RL24_BARQU (50S ribosomal protein L24 OS=Bartonella quintana GN=rplX PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12 Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 3 Query: 54 IVKGDFVEVTQGPQKGQRGKVLAIIRKNSRAIIEGVNM---RPRTVINRISGVPGKTIIRPCSIHYSNMMLIDPSDSKPTKIARRWTADGTKVRVSKRTGHII 353 I KGD V V G KG G+V+ + K ++A + GVNM R + +G+ K IH SN+ + DP D KPT++ R DG KVR +KR+G +I Sbjct: 4 IRKGDKVVVLSGKDKGCSGEVIKVNPKENKAFVRGVNMVKRHQRQTQKQEAGIVSKE----APIHLSNLAIADPKDGKPTRVGFRMNVDGNKVRFAKRSGELI 102
BLAST of CX303406 vs. ExPASy Swiss-Prot
Match: RL24_RICBR (50S ribosomal protein L24 OS=Rickettsia bellii (strain RML369-C) GN=rplX PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.707e-12 Identity = 36/103 (34.95%), Postives = 62/103 (60.19%), Query Frame = 3 Query: 54 IVKGDFVEVTQGPQKGQRGKVLAIIRKNSRAIIEGVNM-RPRTVINRISGVPGKTIIRPCSIHYSNMMLIDPSDSKPTKIARRWTADGTKVRVSKRTGHIIPK 359 + KGD V V G KG++GK+L + + ++ ++ G+N+ + T ++S G I + I SN+ +DP PTK+A ++ DG+KVR++K++G II K Sbjct: 6 VKKGDEVIVITGKYKGKKGKILKVFPEQNKIVVSGINLVKKHTKPTKVS--EGGIITKELPIDISNVAHVDPKTGNPTKVAFKFLEDGSKVRIAKKSGEIIGK 106 The following BLAST results are available for this feature:
BLAST of CX303406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
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Sequences
The
following sequences are available for this feature:
EST sequence >CX303406 ID=CX303406; Name=CX303406; organism=Citrus sinensis; type=EST; length=577bpback to top |