CX303396

Overview
NameCX303396
Unique NameCX303396
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC_CANFA (Uricase OS=Canis familiaris GN=UOX PE=2 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 7.329e-18
Identity = 46/139 (33.09%), Postives = 77/139 (55.40%), Query Frame = 3
Query:    3 KDRYTSLPESTDRLLGTSADAEWVYNSDLVNRGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPFIFYPIDEPHGMIKATVTRTIRSRL 419
            KD++T+LPE  DR   T    +W Y+        +D+ A+++   + +LE F+GP DKG YS SVQ+TLY +   ++  V  ++++ + +PNIH    ++   G  NK+      +  P+D P+G I  T  R + S+L
Sbjct:  175 KDQFTTLPEVKDRCFATKVYCKWRYHQGR----DVDFEATWDTVRDIVLEKFAGPYDKGEYSPSVQKTLYDIQVHSLSRVPEMEDMEISLPNIHYFNIDMSKMGLINKEE-----VLLPLDNPYGRITGTAKRKLASKL 304          
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC_MOUSE (Uricase OS=Mus musculus GN=Uox PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 9.572e-18
Identity = 48/139 (34.53%), Postives = 77/139 (55.40%), Query Frame = 3
Query:    3 KDRYTSLPESTDRLLGTSADAEWVYNSDLVNRGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPFIFYPIDEPHGMIKATVTRTIRSRL 419
            KD++T+LPE  DR   T    +W Y      R  +D+ A +    + +L+ F+GP DKG YS SVQ+TLY +   ++ ++  I+++ + +PNIH    ++   G  NK+      +  P+D P+G I  TV R + SRL
Sbjct:  175 KDQFTTLPEVKDRCFATQVYCKWRYQ-----RRDVDFEAIWGAVRDIVLQKFAGPYDKGEYSPSVQKTLYDIQVLSLSQLPEIEDMEISLPNIHYFNIDMSKMGLINKEE-----VLLPLDNPYGKITGTVKRKLPSRL 303          
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC_RAT (Uricase OS=Rattus norvegicus GN=Uox PE=1 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 3.637e-17
Identity = 48/139 (34.53%), Postives = 78/139 (56.12%), Query Frame = 3
Query:    3 KDRYTSLPESTDRLLGTSADAEWVYNSDLVNRGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPFIFYPIDEPHGMIKATVTRTIRSRL 419
            KD++T+LPE  DR   T    +W Y     NR  +D+ A++    + +L+ F+GP D+G YS SVQ+TLY +    + ++  I+++ + +PNIH    ++   G  NK+      +  P+D P+G I  TV R + SRL
Sbjct:  175 KDQFTTLPEVKDRCFATQVYCKWRYQ----NRD-VDFEATWGAVRDIVLKKFAGPYDRGEYSPSVQKTLYDIQVLTLSQLPEIEDMEISLPNIHYFNIDMSKMGLINKEE-----VLLPLDNPYGKITGTVRRKLPSRL 303          
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC2_CANLI (Uricase-2 isozyme 2 OS=Canavalia lineata PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.204e-17
Identity = 51/139 (36.69%), Postives = 78/139 (56.12%), Query Frame = 3
Query:    3 KDRYTSLPESTDRLLGTSADAEWVYNSDL---VNRGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPF---IFYPIDEPHGMIKATVTR 401
            +D+YT+LPE+ +R+L T   A W Y+ +    + +  + +   + +    L +TF GP + G+YS SVQ TLYLMA        +   + L MPNIH LP N+      NKD     F   +++P DEPHG I+A+++R
Sbjct:  170 RDKYTALPETHERMLATEVTALWRYSYESLYSIPQKPLYFTDKYLEVKKVLADTFFGPPNVGVYSPSVQNTLYLMA-------KAHSSIQLKMPNIHFLPVNIS-----NKDGPIVKFDDDVYFPTDEPHGSIQASLSR 296          
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC_PHAVU (Uricase-2 OS=Phaseolus vulgaris GN=URIII PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 8.103e-17
Identity = 51/139 (36.69%), Postives = 80/139 (57.55%), Query Frame = 3
Query:    3 KDRYTSLPESTDRLLGTSADAEWVYNSD-LVN--RGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPF---IFYPIDEPHGMIKATVTR 401
            +++YT+LP++ +R+L T   A W Y+ + L N  +  + +   + +    L +TF GP ++G+YS SVQ TLYLMA   +     I  V L MPN+H LP N+      +KD     F   ++ P DEPHG I+A+++R
Sbjct:  170 RNKYTALPDTRERILATEVTALWRYSYESLYNLPQKPLYFTDKYLEVKKVLADTFFGPPNRGVYSPSVQNTLYLMAKATLNRFPDIAYVHLKMPNLHFLPVNIS-----SKDGPIVKFEDDVYLPTDEPHGSIEASLSR 303          
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC1_SOYBN (Uricase-2 isozyme 1 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 8.103e-17
Identity = 47/139 (33.81%), Postives = 79/139 (56.83%), Query Frame = 3
Query:    3 KDRYTSLPESTDRLLGTSADAEWVYNSDLVN---RGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPF---IFYPIDEPHGMIKATVTR 401
            +D+YT+LP++ +R++ T   A W Y+ + +    +  + +   +++    L +TF GP   G+YS SVQ TLYLMA   +     I  V+L +PN+H +P N+      N+D     F   ++ P DEPHG I+A+++R
Sbjct:  171 RDKYTALPDTRERMVATEVTALWRYSYESLYSLPQKPLYFTEKYQEVKKVLADTFFGPPKGGVYSPSVQNTLYLMAKATLNRFPDIAYVSLKLPNLHFIPVNIS-----NQDGPIVKFEDDVYLPTDEPHGSIQASLSR 304          
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC_DICDI (Uricase OS=Dictyostelium discoideum GN=uox PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.058e-16
Identity = 50/139 (35.97%), Postives = 78/139 (56.12%), Query Frame = 3
Query:    3 KDRYTSLPESTDRLLGTSADAEWVYNSDLVNRGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPFIFYPIDEPHGMIKATVTRTIRSRL 419
            +D+YTSL E+ DR+  T   A W YN+       +DY+  FE+   ++ + F+       YS+SVQETL+L+A D I +V  +++V L +PN H   F+       N     N  +F P++EP G+I+ T+ R+  SRL
Sbjct:  165 RDKYTSLKETKDRVFATVVTANWTYNTL-----SVDYSKVFEQFKLSVFDIFAQT-----YSRSVQETLFLIAKDVISKVPQVEQVHLSLPNKHAFGFDFSRLNIEN-----NQTVFQPVEEPSGLIEGTIKRS-HSRL 287          
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC_DROME (Uricase OS=Drosophila melanogaster GN=Uro PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.207e-14
Identity = 44/132 (33.33%), Postives = 68/132 (51.52%), Query Frame = 3
Query:    6 DRYTSLPESTDRLLGTSADAEWVYNSDLVNRGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPFIFYPIDEPHGMIKATVTR 401
            D + SLP+  DR+  T  D  W Y SD  N   +D+  +++   N ++  F+G    G+ S SVQ TLYL     +  +  +  +++ MPN H   FN +T  F+      N  +F P+D+PHG I A + R
Sbjct:  220 DEFRSLPDQYDRIFSTVVDCSWEY-SDTEN---LDFLRAWQTVKNIIIRNFAGDPQVGVSSPSVQHTLYLSERQVLDVLPQVSVISMTMPNKHY--FNFDTKPFQKIAPGDNNEVFIPVDKPHGTIYAQLAR 345          
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC_DROSU (Uricase (Fragment) OS=Drosophila subobscura GN=Uro PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.882e-14
Identity = 44/133 (33.08%), Postives = 69/133 (51.88%), Query Frame = 3
Query:    6 DRYTSLPESTDRLLGTSADAEWVYN-SDLVNRGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPFIFYPIDEPHGMIKATVTR 401
            D   SLP+  DR+  T  D  W Y+ +D VN     ++ ++++  N +L  F+G    G+ S SVQ TLYL     +  +  +  +++ MPN H   FN +T  F+      N  +F P+D+PHG I A + R
Sbjct:  207 DEXRSLPDQYDRIFSTVVDCSWEYSDTDTVN-----FSRAWQQVKNIILRNFAGDPQVGVSSPSVQHTLYLSEKQVLDVIPQVSVISMTMPNKHY--FNFDTKPFQQIVPGDNNEVFIPVDKPHGTIYAQLAR 332          
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC_DROPS (Uricase OS=Drosophila pseudoobscura pseudoobscura GN=Uro PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 2.882e-14
Identity = 41/132 (31.06%), Postives = 68/132 (51.52%), Query Frame = 3
Query:    6 DRYTSLPESTDRLLGTSADAEWVYNSDLVNRGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPFIFYPIDEPHGMIKATVTR 401
            D + SLP+  DR+  T  D  W Y+    +   ++++ +++   N +L  F+G    G+ S SVQ TLYL     +  +  +  +++ MPN H   FN +T  F+      N  +F P+D+PHG I A + R
Sbjct:  214 DEFRSLPDQYDRIFSTVVDCSWEYS----DTETVNFSRAWQTVKNIILRNFAGDPQVGVSSPSVQHTLYLSEKQVLDVIPQVSVISMTMPNKHY--FNFDTKPFQKIVPGDNNEVFIPVDKPHGTIYAQLAR 339          
The following BLAST results are available for this feature:
BLAST of CX303396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
URIC_CANFA7.329e-1833.09Uricase OS=Canis familiaris GN=UOX PE=2 SV=3[more]
URIC_MOUSE9.572e-1834.53Uricase OS=Mus musculus GN=Uox PE=1 SV=2[more]
URIC_RAT3.637e-1734.53Uricase OS=Rattus norvegicus GN=Uox PE=1 SV=3[more]
URIC2_CANLI6.204e-1736.69Uricase-2 isozyme 2 OS=Canavalia lineata PE=2 SV=1[more]
URIC_PHAVU8.103e-1736.69Uricase-2 OS=Phaseolus vulgaris GN=URIII PE=1 SV=2[more]
URIC1_SOYBN8.103e-1733.81Uricase-2 isozyme 1 OS=Glycine max PE=1 SV=2[more]
URIC_DICDI1.058e-1635.97Uricase OS=Dictyostelium discoideum GN=uox PE=3 SV... [more]
URIC_DROME2.207e-1433.33Uricase OS=Drosophila melanogaster GN=Uro PE=1 SV=... [more]
URIC_DROSU2.882e-1433.08Uricase (Fragment) OS=Drosophila subobscura GN=Uro... [more]
URIC_DROPS2.882e-1431.06Uricase OS=Drosophila pseudoobscura pseudoobscura ... [more]

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Properties
Property NameValue
Genbank descriptionC08030G08SK PhyRootSw1 Citrus sinensis cDNA clone C08030G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX303396 ID=CX303396; Name=CX303396; organism=Citrus sinensis; type=EST; length=622bp
CAAAAGATCGCTACACCTCTTTACCGGAGTCTACTGACCGTCTCTTGGGC
ACGTCAGCCGATGCTGAGTGGGTCTATAACTCTGACTTAGTCAACAGAGG
TAAAATCGACTACAATGCGAGCTTTGAGAAGGCTGTAAATGCATTATTAG
AGACCTTTAGTGGTCCTGCTGATAAAGGTATTTACAGTAAATCAGTGCAA
GAGACTCTCTATTTAATGGCATGTGATGCGATTAAGGAAGTTAACAGTAT
TGATGAAGTCACTTTAATGATGCCTAACATTCATAACCTTCCTTTTAACC
TTGAAACTTATGGTTTCCGTAATAAAGATCATACTGGAAATCCTTTTATC
TTTTATCCAATTGATGAACCACATGGAATGATCAAGGCAACTGTGACAAG
AACTATTAGATCAAGATTGTAAACACCTTTATTTCTGTCTTTCGATCTTT
GGAAAGTGACGAATACTATCACTCACTAGAATCACATTACAAAACTGCGT
CATATCGTAAAAATAAACAGAAACATTGTTAGATTATATGTGTAGAATAG
GATGGGGGAGATACTCTCTTCATTTGAACGATTTAAAATAAAGCAATCAA
AGTCAAAAAAAAAAAAAAAAAA
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