CX303388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX303388 vs. ExPASy Swiss-Prot
Match: IF5A2_YEAST (Eukaryotic translation initiation factor 5A-2 OS=Saccharomyces cerevisiae GN=HYP2 PE=1 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 1.305e-36 Identity = 76/151 (50.33%), Postives = 100/151 (66.23%), Query Frame = 3 Query: 72 DYDFSGTDAGASHVYNEEAGQIRVGGYIVIKDHPCKVTAVSTSKTGKHGHAKCNFTAIDIFTGKKYEDIIPSTHNTHVPFVTRKELSLVDISGDDFCSLMDEDGNVREDVKLPEYPDNFGREIRTAFETGKSHSVTLVSAMGHDQIVAIKE 524 ++ F DAG+S Y + +R G++VIK PCK+ +STSKTGKHGHAK + AIDIFTGKK ED+ PSTHN VP V R E L+DI D F SLM+ DG+ ++DVK PE G ++TAF+ GK VT++SAMG + ++ KE Sbjct: 5 EHTFETADAGSSATYPMQCSALRKNGFVVIKSRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLSPSTHNMEVPVVKRNEYQLLDID-DGFLSLMNMDGDTKDDVKAPE--GELGDSLQTAFDEGKDLMVTIISAMGEEAAISFKE 152
BLAST of CX303388 vs. ExPASy Swiss-Prot
Match: IF5A_DICDI (Eukaryotic translation initiation factor 5A OS=Dictyostelium discoideum GN=eif5a PE=1 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 4.958e-36 Identity = 76/153 (49.67%), Postives = 107/153 (69.93%), Query Frame = 3 Query: 63 DINDYDFSGTDAGASHVYNEEAGQIRVGGYIVIKDHPCKVTAVSTSKTGKHGHAKCNFTAIDIFTGKKYEDIIPSTHNTHVPFVTRKELSLVDISGDDFCSLMDEDGNVREDVKLPEYPDNFGREIRTAFETGKSHSVTLVSAMGHDQIVAIK 521 D+ DY +G+ GAS + + +R G++VIK PCK+ +STSKTGKHGHAK N TAIDIFTGKKYE+I PSTHN VP V+RKE +++D+ D + SL+D G V+ED+ LPE D+ G+EI + GK V+++SA+G + +V++K Sbjct: 8 DVEDYAQAGS--GASLTFPIQCSALRKNGFVVIKGFPCKIVDMSTSKTGKHGHAKVNITAIDIFTGKKYEEICPSTHNIDVPNVSRKEYTVMDVQ-DGYLSLLDAGGEVKEDLALPE--DDIGKEITQMLKEGKEPLVSVISALGKEGVVSVK 155
BLAST of CX303388 vs. ExPASy Swiss-Prot
Match: IF5A1_YEAST (Eukaryotic translation initiation factor 5A-1 OS=Saccharomyces cerevisiae GN=HYP1 PE=1 SV=3) HSP 1 Score: 150.984 bits (380), Expect = 4.958e-36 Identity = 75/155 (48.39%), Postives = 98/155 (63.23%), Query Frame = 3 Query: 72 DYDFSGTDAGASHVYNEEAGQIRVGGYIVIKDHPCKVTAVSTSKTGKHGHAKCNFTAIDIFTGKKYEDIIPSTHNTHVPFVTRKELSLVDISGDDFCSLMDEDGNVREDVKLPEYPDNFGREIRTAFETGKSHSVTLVSAMGHDQIVAIKEEQES 536 ++ F DAGAS Y + +R G++VIK PCK+ +STSKTGKHGHAK + +DIFTGKK ED+ PSTHN VPFV R E L+DI D + SLM DG ++DVK PE G ++ AF+ GK VT++SAMG + ++ KE S Sbjct: 5 EHTFENADAGASATYPMQCSALRKNGFVVIKGRPCKIVDMSTSKTGKHGHAKVHLVTLDIFTGKKLEDLSPSTHNLEVPFVKRSEYQLLDID-DGYLSLMTMDGETKDDVKAPE--GELGDSMQAAFDEGKDLMVTIISAMGEEAAISFKEAPRS 156
BLAST of CX303388 vs. ExPASy Swiss-Prot
Match: IF5A_DROME (Eukaryotic translation initiation factor 5A OS=Drosophila melanogaster GN=eIF-5A PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 6.475e-36 Identity = 73/155 (47.10%), Postives = 104/155 (67.10%), Query Frame = 3 Query: 57 MGDINDYDFSGTDAGASHVYNEEAGQIRVGGYIVIKDHPCKVTAVSTSKTGKHGHAKCNFTAIDIFTGKKYEDIIPSTHNTHVPFVTRKELSLVDISGDDFCSLMDEDGNVREDVKLPEYPDNFGREIRTAFETGKSHSVTLVSAMGHDQIVAIK 521 M +++D F TD+GAS Y + +R G++++K PCK+ +STSKTGKHGHAK + IDIF+ KKYEDI PSTHN VP V R++L L+ IS D F +LM E G++RED+K+PE G ++R F++GK T++ A G + ++AIK Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPE--GELGEQLRLDFDSGKDLLCTVLKACGEECVIAIK 152
BLAST of CX303388 vs. ExPASy Swiss-Prot
Match: IF5A_SPOFR (Eukaryotic translation initiation factor 5A OS=Spodoptera frugiperda GN=eIF-5A PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.105e-35 Identity = 69/155 (44.52%), Postives = 104/155 (67.10%), Query Frame = 3 Query: 57 MGDINDYDFSGTDAGASHVYNEEAGQIRVGGYIVIKDHPCKVTAVSTSKTGKHGHAKCNFTAIDIFTGKKYEDIIPSTHNTHVPFVTRKELSLVDISGDDFCSLMDEDGNVREDVKLPEYPDNFGREIRTAFETGKSHSVTLVSAMGHDQIVAIK 521 M DI D F D+GAS + + +R G++++K PCK+ +STSKTGKHGHAK + IDIF GKKYEDI PSTHN VP V R++ L DIS D + +LM ++G++RED+K+P+ + G ++R+ F++GK T++ + G + ++A+K Sbjct: 1 MADIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPD--GDLGTQLRSDFDSGKELLCTVLKSCGEECVIAVK 153
BLAST of CX303388 vs. ExPASy Swiss-Prot
Match: IF5A_SPOEX (Eukaryotic translation initiation factor 5A OS=Spodoptera exigua GN=eIF-5A PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.105e-35 Identity = 69/155 (44.52%), Postives = 104/155 (67.10%), Query Frame = 3 Query: 57 MGDINDYDFSGTDAGASHVYNEEAGQIRVGGYIVIKDHPCKVTAVSTSKTGKHGHAKCNFTAIDIFTGKKYEDIIPSTHNTHVPFVTRKELSLVDISGDDFCSLMDEDGNVREDVKLPEYPDNFGREIRTAFETGKSHSVTLVSAMGHDQIVAIK 521 M DI D F D+GAS + + +R G++++K PCK+ +STSKTGKHGHAK + IDIF GKKYEDI PSTHN VP V R++ L DIS D + +LM ++G++RED+K+P+ + G ++R+ F++GK T++ + G + ++A+K Sbjct: 1 MADIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPD--GDLGTQLRSDFDSGKELLCTVLKSCGEECVIAVK 153
BLAST of CX303388 vs. ExPASy Swiss-Prot
Match: IF5A1_RABIT (Eukaryotic translation initiation factor 5A-1 OS=Oryctolagus cuniculus GN=EIF5A PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 9.351e-35 Identity = 72/151 (47.68%), Postives = 100/151 (66.23%), Query Frame = 3 Query: 69 NDYDFSGTDAGASHVYNEEAGQIRVGGYIVIKDHPCKVTAVSTSKTGKHGHAKCNFTAIDIFTGKKYEDIIPSTHNTHVPFVTRKELSLVDISGDDFCSLMDEDGNVREDVKLPEYPDNFGREIRTAFETGKSHSVTLVSAMGHDQIVAIK 521 +D DF DAGAS + + +R G++V+K PCK+ +STSKTGKHGHAK + IDIFTGKKYEDI PSTHN VP + R + L+ I D + SL+ + G VRED++LPE + G+EI +++G+ +T++SAM + VAIK Sbjct: 3 DDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQ-DGYLSLLQDSGEVREDLRLPE--GDLGKEIEQKYDSGEEILITVLSAMTEEAAVAIK 150
BLAST of CX303388 vs. ExPASy Swiss-Prot
Match: IF5A_CANAL (Eukaryotic translation initiation factor 5A OS=Candida albicans GN=ANB1 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.595e-34 Identity = 72/148 (48.65%), Postives = 101/148 (68.24%), Query Frame = 3 Query: 81 FSGTDAGASHVYNEEAGQIRVGGYIVIKDHPCKVTAVSTSKTGKHGHAKCNFTAIDIFTGKKYEDIIPSTHNTHVPFVTRKELSLVDISGDDFCSLMDEDGNVREDVKLPEYPDNFGREIRTAFETGKSHSVTLVSAMGHDQIVAIKE 524 F DAGA+ + + +R G++VIK+ PCK+ +STSKTGKHGHAK + AIDIFTGKK ED+ PSTHN VP V+R+E L+DI D + SLM DG+ ++DVK+PE G ++++ F+ GK VT++SAMG + ++ KE Sbjct: 7 FETADAGAALTFPMQCSALRKNGHVVIKNRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLSPSTHNMEVPNVSRQEFQLLDID-DGYLSLMTADGDTKDDVKVPE--GELGDKLQSEFDEGKDLIVTIISAMGEEAAISYKE 151
BLAST of CX303388 vs. ExPASy Swiss-Prot
Match: IF5A1_RAT (Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus GN=Eif5a PE=1 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 1.595e-34 Identity = 72/151 (47.68%), Postives = 99/151 (65.56%), Query Frame = 3 Query: 69 NDYDFSGTDAGASHVYNEEAGQIRVGGYIVIKDHPCKVTAVSTSKTGKHGHAKCNFTAIDIFTGKKYEDIIPSTHNTHVPFVTRKELSLVDISGDDFCSLMDEDGNVREDVKLPEYPDNFGREIRTAFETGKSHSVTLVSAMGHDQIVAIK 521 +D DF DAGAS + + +R G++V+K PCK+ +STSKTGKHGHAK + IDIFTGKKYEDI PSTHN VP + R + L+ I D + SL+ + G VRED++LPE + G+EI ++ G+ +T++SAM + VAIK Sbjct: 3 DDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQ-DGYLSLLQDSGEVREDLRLPE--GDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CX303388 vs. ExPASy Swiss-Prot
Match: IF5A1_MOUSE (Eukaryotic translation initiation factor 5A-1 OS=Mus musculus GN=Eif5a PE=1 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.595e-34 Identity = 72/151 (47.68%), Postives = 99/151 (65.56%), Query Frame = 3 Query: 69 NDYDFSGTDAGASHVYNEEAGQIRVGGYIVIKDHPCKVTAVSTSKTGKHGHAKCNFTAIDIFTGKKYEDIIPSTHNTHVPFVTRKELSLVDISGDDFCSLMDEDGNVREDVKLPEYPDNFGREIRTAFETGKSHSVTLVSAMGHDQIVAIK 521 +D DF DAGAS + + +R G++V+K PCK+ +STSKTGKHGHAK + IDIFTGKKYEDI PSTHN VP + R + L+ I D + SL+ + G VRED++LPE + G+EI ++ G+ +T++SAM + VAIK Sbjct: 3 DDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQ-DGYLSLLQDSGEVREDLRLPE--GDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150 The following BLAST results are available for this feature:
BLAST of CX303388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX303388 ID=CX303388; Name=CX303388; organism=Citrus sinensis; type=EST; length=646bpback to top |