CX303385

Overview
NameCX303385
Unique NameCX303385
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: CSK2A_THEPA (Casein kinase II subunit alpha OS=Theileria parva GN=TP04_0659 PE=3 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.541e-40
Identity = 69/116 (59.48%), Postives = 95/116 (81.90%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVR 351
            +D+WS+GCM AG+IF+KEPFFYGHDN DQLVKIAKVLGT++L+ Y EKY L+  P  + ++G HS+KPW++F++ +NQHLVSPE +D LD++L YDH  R+T  EAM HP+F +++
Sbjct:  229 LDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAKVLGTEDLHRYFEKYGLKFAPAYQEILGNHSKKPWTKFVHHENQHLVSPEVMDLLDRMLVYDHTKRITPLEAMEHPFFNEIK 344          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: CSK2A_THEAN (Casein kinase II subunit alpha OS=Theileria annulata GN=TA10630 PE=3 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.541e-40
Identity = 69/116 (59.48%), Postives = 95/116 (81.90%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVR 351
            +D+WS+GCM AG+IF+KEPFFYGHDN DQLVKIAKVLGT++L+ Y EKY L+  P  + ++G HS+KPW++F++ +NQHLVSPE +D LD++L YDH  R+T  EAM HP+F +++
Sbjct:  229 LDIWSIGCMLAGIIFKKEPFFYGHDNYDQLVKIAKVLGTEDLHRYFEKYGLKFAPAYQEILGNHSKKPWTKFVHHENQHLVSPEVMDLLDRMLVYDHTKRITPLEAMEHPFFNEIK 344          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: CSK2A_SCHPO (Casein kinase II subunit alpha OS=Schizosaccharomyces pombe GN=cka1 PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.493e-35
Identity = 67/112 (59.82%), Postives = 89/112 (79.46%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 339
            +D+WS G MFA +IF+K+ FF G DN DQLVKIAKVLGTDEL AY++KY + LD Q + ++G++ ++ W  F+N DN+ L + EAID L++LLRYDHQ+RLT +EAMAHPYF
Sbjct:  217 LDIWSFGVMFAALIFKKDTFFRGRDNYDQLVKIAKVLGTDELFAYVQKYQIVLDRQYDNILGQYPKRDWYSFVNRDNRSLANDEAIDLLNRLLRYDHQERLTCQEAMAHPYF 328          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: Y6481_DICDI (Probable serine/threonine-protein kinase DDB_G0286481 OS=Dictyostelium discoideum GN=DDB_G0286481 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.001e-31
Identity = 62/112 (55.36%), Postives = 82/112 (73.21%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 339
            +DMWSLGC+FAG+I  ++PFF G +N DQL+KI KVLGTD+L  +L+K+ L L  +  +L+    +  W RFI  +N  +  P+AIDFLDKLLRYD  +RLTA+EAM HPYF
Sbjct:  486 LDMWSLGCLFAGLILDRDPFFNGDNNNDQLLKIVKVLGTDDLFNFLDKFGLSLTDEQSSLIKPRQKSNWERFIPYENDDIAQPDAIDFLDKLLRYDPTERLTAKEAMKHPYF 597          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: CSK21_YEAST (Casein kinase II subunit alpha OS=Saccharomyces cerevisiae GN=CKA1 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.889e-30
Identity = 65/117 (55.56%), Postives = 83/117 (70.94%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLV-SPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVR 351
            +D+WS G M A MIF++EPFF+G  N DQLVKI KVLGT +   YL KY + L P+    + ++ RKPW RFIN  N+HL  + E ID +D LLRYDHQ+RLTA+EAM HP+F  +R
Sbjct:  252 LDLWSFGTMLASMIFKREPFFHGTSNTDQLVKIVKVLGTSDFEKYLLKYEITL-PREFYDMDQYIRKPWHRFINDGNKHLSGNDEIIDLIDNLLRYDHQERLTAKEAMGHPWFAPIR 367          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: CSK22_YEAST (Casein kinase II subunit alpha' OS=Saccharomyces cerevisiae GN=CKA2 PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.562e-29
Identity = 60/112 (53.57%), Postives = 80/112 (71.43%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 339
            +D+WS+GCM A ++F+KEPFF G  N DQLVKIA VLGT EL  YL KY L L  + + ++   ++K W+ FI S+ + L  PE +D +D LLRYDHQ+RLTA+EAM H +F
Sbjct:  224 LDLWSVGCMLAAIVFKKEPFFKGSSNPDQLVKIATVLGTKELLGYLGKYGLHLPSEYDNIMRDFTKKSWTHFITSETK-LAVPEVVDLIDNLLRYDHQERLTAKEAMDHKFF 334          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: CSK2A_ENCCU (Probable casein kinase II subunit alpha homolog OS=Encephalitozoon cuniculi GN=CKA1 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.959e-19
Identity = 52/113 (46.02%), Postives = 69/113 (61.06%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLEKYHL-ELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 339
            +D+WS GC+ A ++F+K PFF+G  N DQLVKIA++LG   L  Y+ KY +  L+P+ E   G   R   S F       L +  AID L+K+L YDHQDR TA E + HP F
Sbjct:  208 LDIWSFGCVLAELVFKKRPFFHGESNSDQLVKIARILGYTHLKKYVRKYKMAPLNPKYE---GVGERVLLSSFTPPGKTGLYT-NAIDLLEKILIYDHQDRPTADECLRHPLF 316          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: KSG2_ARATH (Shaggy-related protein kinase beta OS=Arabidopsis thaliana GN=ASK2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.578e-13
Identity = 46/119 (38.66%), Postives = 66/119 (55.46%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGT---DELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVR 351
            +DMWS+GC+ A + F   P F G  + DQLV+I K+LGT   +E+     +Y+    PQ++A       +PW +         VSPEA+D   +LL+Y    R TA EA AHP+F  +R
Sbjct:  284 IDMWSVGCVMAEL-FLGHPLFPGETSVDQLVEIIKILGTPAREEIKNMNPRYNDFKFPQIKA-------QPWHKIFRRQ----VSPEAMDLASRLLQYSPNLRCTALEACAHPFFDDLR 390          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: CDC28_YEAST (Cell division control protein 28 OS=Saccharomyces cerevisiae GN=CDC28 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.103e-13
Identity = 46/114 (40.35%), Postives = 62/114 (54.39%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQ 345
            VD WS+GC+FA M  RK P F G    DQ+ KI +VLGT     + +  +L   P  +    +  RK  S+ + S     + P  ID LDKLL YD  +R++AR A  HPYF +
Sbjct:  193 VDTWSIGCIFAEMCNRK-PIFSGDSEIDQIFKIFRVLGTPNEAIWPDIVYL---PDFKPSFPQWRRKDLSQVVPS-----LDPRGIDLLDKLLAYDPINRISARRAAIHPYFQE 297          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: CDK12_CAEEL (Putative cell division protein kinase 12 OS=Caenorhabditis elegans GN=cdtl-7 PE=3 SV=4)

HSP 1 Score: 73.559 bits (179), Expect = 1.041e-12
Identity = 41/127 (32.28%), Postives = 77/127 (60.63%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLEKYHLELDPQLEALVGRHS---RKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVRAAENSRVR 375
            +D+WS GCM  G +F ++P F G++   QL  I+KV G+  ++ +         P+L  LVG ++   ++ + R I  + +H++  EA+D LDK+L  + + R++A+EA+ HP+   +R+ E++ V+
Sbjct:  501 IDVWSTGCML-GELFTRKPLFNGNNEFGQLELISKVCGSPNVDNW---------PELTELVGWNTFRMKRTYQRRIREEFEHIMPREAVDLLDKMLTLNPEKRISAKEALNHPW---IRSLEHTTVQ 614          
The following BLAST results are available for this feature:
BLAST of CX303385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CSK2A_THEPA1.541e-4059.48Casein kinase II subunit alpha OS=Theileria parva ... [more]
CSK2A_THEAN1.541e-4059.48Casein kinase II subunit alpha OS=Theileria annula... [more]
CSK2A_SCHPO1.493e-3559.82Casein kinase II subunit alpha OS=Schizosaccharomy... [more]
Y6481_DICDI1.001e-3155.36Probable serine/threonine-protein kinase DDB_G0286... [more]
CSK21_YEAST1.889e-3055.56Casein kinase II subunit alpha OS=Saccharomyces ce... [more]
CSK22_YEAST3.562e-2953.57Casein kinase II subunit alpha' OS=Saccharomyces c... [more]
CSK2A_ENCCU1.959e-1946.02Probable casein kinase II subunit alpha homolog OS... [more]
KSG2_ARATH3.578e-1338.66Shaggy-related protein kinase beta OS=Arabidopsis ... [more]
CDC28_YEAST6.103e-1340.35Cell division control protein 28 OS=Saccharomyces ... [more]
CDK12_CAEEL1.041e-1232.28Putative cell division protein kinase 12 OS=Caenor... [more]

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Properties
Property NameValue
Genbank descriptionC08030F09SK PhyRootSw1 Citrus sinensis cDNA clone C08030F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX303385 ID=CX303385; Name=CX303385; organism=Citrus sinensis; type=EST; length=659bp
GAGGTGGACATGTGGAGCCTCGGCTGTATGTTTGCAGGAATGATTTTTCG
CAAGGAACCATTCTTTTATGGTCATGACAATCAAGACCAGCTTGTCAAAA
TTGCAAAGGTTCTGGGAACCGATGAGTTAAATGCATACTTGGAAAAATAT
CATTTAGAGCTTGATCCGCAGCTTGAAGCTCTAGTTGGAAGGCATAGCAG
GAAGCCATGGTCCAGATTCATTAATTCAGATAATCAGCATCTAGTTTCCC
CAGAGGCCATTGATTTTCTTGATAAGCTTCTTCGCTATGATCACCAGGAC
AGGCTTACAGCCAGAGAGGCAATGGCTCATCCTTATTTCTATCAAGTGAG
GGCTGCAGAAAATAGCAGAGTCCGCGCGCATTAGCTCCATGCTTAGTCCC
TTCCTGAGTATACTTGTATTTCATTTGGGCCCATTCTTATGGATGGAGTA
TATTTCTGGTCTATTGATAAGTCGTTGTACCAGTAGTCTATAGGTCGCAT
CCATATTTTCAGATGGTCTATCGACAAGTCGTTGGTAGTATACTTGTATT
TCATTTGAGCTTTAATGTTGCTCGTGTGGACTGTACAGCTTGTTCCGTTG
TGTTTGCCTTATACATGTCAATTATTTGTACAAAATTACAGATAATAACT
CTTCTTTTG
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