CX303385

Overview
NameCX303385
Unique NameCX303385
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: MK12_DANRE (Mitogen-activated protein kinase 12 OS=Danio rerio GN=mapk12 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12
Identity = 47/122 (38.52%), Postives = 67/122 (54.92%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHL---VSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVRAAE 360
            VD+WS+GC+ A M+  K P F GHD+ DQL++I KV GT            E   +L++   R+      RF   D + L   V+P+AI  LD +L  D + R+TA EA+A P+F + R  E
Sbjct:  205 VDIWSVGCIMAEMLLGK-PLFKGHDHLDQLMEIMKVTGTPSK---------EFTAKLQSEDARNYVTKLPRFRKKDLRILLPNVNPQAIKVLDGMLLLDPESRITAAEALAFPFFSEFREPE 316          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: MK12_RAT (Mitogen-activated protein kinase 12 OS=Rattus norvegicus GN=Mapk12 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.776e-12
Identity = 47/126 (37.30%), Postives = 73/126 (57.94%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGT------DELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVRAAEN 363
            VD+WS+GC+ A MI  K   F G+D+ DQL +I KV GT       +L +   K ++E  P+LE       +K ++  + +      SP+A++ L+K+L  D + R+TA EA+AHPYF  +R  E+
Sbjct:  207 VDIWSVGCIMAEMITGKI-LFKGNDHLDQLKEIMKVTGTPPPEFVQKLQSAEAKNYMEGLPELE-------KKDFASVLTN-----ASPQAVNLLEKMLVLDAEQRVTAAEALAHPYFESLRDTED 319          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: CDC2H_PLABA (Cell division control protein 2 homolog OS=Plasmodium berghei (strain Anka) GN=CRK2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.319e-12
Identity = 39/112 (34.82%), Postives = 61/112 (54.46%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 339
            +D+WS+GC+FA M+    P F G    DQL++I K+LGT     + + + L   P+ +     ++  PW  FI       +    ID L K+L+ D   R+TA++A+ HPYF
Sbjct:  182 IDIWSVGCIFAEMV-NGRPLFPGASETDQLMRIFKILGTPNSQNWPDVFKL---PKYDPNFPVYNPLPWETFIKG-----LDDTGIDLLSKMLKLDPNQRITAKQAIEHPYF 284          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: CKB21_ORYSJ (Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica GN=CDKB2-1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.029e-12
Identity = 40/115 (34.78%), Postives = 61/115 (53.04%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQV 348
            VD+WS+GC+FA +    +P F G     QL+ I K+LGT     +         P +  L   H    W+    SD  H +  +A+D L+K+L+Y+   R++A++AM HPYF  V
Sbjct:  217 VDIWSVGCIFAELA-TNQPLFAGDSEVQQLLHIFKLLGTPNEQVW---------PGVSKLPNWHEYPQWNPSKVSDLVHGLDADALDLLEKMLQYEPSKRISAKKAMEHPYFNDV 321          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: CDC2H_PLACH (Cell division control protein 2 homolog OS=Plasmodium chabaudi GN=CRK2 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.029e-12
Identity = 39/112 (34.82%), Postives = 61/112 (54.46%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 339
            +D+WS+GC+FA M+    P F G  + DQL++I K+LGT     + + + L   P+ +     +   PW  FI       +    ID L K+L+ D   R+TA++A+ HPYF
Sbjct:  182 IDIWSVGCIFAEMV-NGRPLFPGVSDTDQLMRIFKILGTPNSQNWPDVFKL---PKYDPNFPVYEPLPWETFIKG-----LDDTGIDLLSKMLKLDPNQRITAKQAIEHPYF 284          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: KSG7_ARATH (Shaggy-related protein kinase eta OS=Arabidopsis thaliana GN=ASK7 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.956e-12
Identity = 45/119 (37.82%), Postives = 65/119 (54.62%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGT---DELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVR 351
            +D+WS GC+ A ++   +P F G +  DQLV+I KVLGT   +E+      Y     PQ++A        PW +  +      + PEAIDF  +LL+Y    R TA EA AHP+F ++R
Sbjct:  222 IDIWSAGCVLAELLLG-QPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPHYTDFRFPQIKA-------HPWHKIFHKR----MPPEAIDFASRLLQYSPSLRCTALEACAHPFFDELR 328          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAYO (Cell division control protein 2 homolog OS=Plasmodium yoelii yoelii GN=CRK2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.956e-12
Identity = 39/112 (34.82%), Postives = 60/112 (53.57%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 339
            +D+WS+GC+FA M+    P F G    DQL++I K+LGT     + + + L   P+ +     +   PW  FI       +    ID L K+L+ D   R+TA++A+ HPYF
Sbjct:  183 IDIWSVGCIFAEMV-NGRPLFPGVSETDQLMRIFKILGTPNSQNWPDVFKL---PKYDPNFPVYEPLPWETFIKG-----LDDTGIDLLSKMLKLDPNQRITAKQAIEHPYF 285          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: KSGT_BRANA (Shaggy-related protein kinase theta OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.167e-12
Identity = 44/120 (36.67%), Postives = 64/120 (53.33%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGT---DELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVRA 354
            +DMWS GC+ A ++   +P F G    DQLV+I K+LGT   +E+      Y     PQ++A        PW +  +      + PEA+D + +LL+Y    R TA EA AHP+F  +RA
Sbjct:  316 IDMWSGGCVMAELLLG-QPLFPGESGIDQLVEIIKILGTPTREEIRCMNPNYTEFKFPQIKA-------HPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTALEACAHPFFDDLRA 423          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: KSG9_ARATH (Shaggy-related protein kinase iota OS=Arabidopsis thaliana GN=ASK9 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.748e-12
Identity = 44/119 (36.97%), Postives = 65/119 (54.62%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGT---DELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVR 351
            +D+WS GC+ A ++   +P F G ++ DQLV+I KVLGT   +E+      Y     PQ++A        PW +  +      + PEAID   +LL+Y    R TA EA AHP+F ++R
Sbjct:  252 IDIWSAGCVLAELLLG-QPLFPGENSVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFFNELR 358          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: KSG6_ARATH (Shaggy-related protein kinase zeta OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.748e-12
Identity = 44/119 (36.97%), Postives = 65/119 (54.62%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGT---DELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVR 351
            +D+WS GC+ A ++   +P F G ++ DQLV+I KVLGT   +E+      Y     PQ++A        PW +  +      + PEAID   +LL+Y    R TA EA AHP+F ++R
Sbjct:  254 IDIWSAGCVLAELLLG-QPLFPGENSVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFFNELR 360          
The following BLAST results are available for this feature:
BLAST of CX303385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
MK12_DANRE1.360e-1238.52Mitogen-activated protein kinase 12 OS=Danio rerio... [more]
MK12_RAT1.776e-1237.30Mitogen-activated protein kinase 12 OS=Rattus norv... [more]
CDC2H_PLABA2.319e-1234.82Cell division control protein 2 homolog OS=Plasmod... [more]
CKB21_ORYSJ3.029e-1234.78Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp... [more]
CDC2H_PLACH3.029e-1234.82Cell division control protein 2 homolog OS=Plasmod... [more]
KSG7_ARATH3.956e-1237.82Shaggy-related protein kinase eta OS=Arabidopsis t... [more]
CDC2H_PLAYO3.956e-1234.82Cell division control protein 2 homolog OS=Plasmod... [more]
KSGT_BRANA5.167e-1236.67Shaggy-related protein kinase theta OS=Brassica na... [more]
KSG9_ARATH6.748e-1236.97Shaggy-related protein kinase iota OS=Arabidopsis ... [more]
KSG6_ARATH6.748e-1236.97Shaggy-related protein kinase zeta OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC08030F09SK PhyRootSw1 Citrus sinensis cDNA clone C08030F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX303385 ID=CX303385; Name=CX303385; organism=Citrus sinensis; type=EST; length=659bp
GAGGTGGACATGTGGAGCCTCGGCTGTATGTTTGCAGGAATGATTTTTCG
CAAGGAACCATTCTTTTATGGTCATGACAATCAAGACCAGCTTGTCAAAA
TTGCAAAGGTTCTGGGAACCGATGAGTTAAATGCATACTTGGAAAAATAT
CATTTAGAGCTTGATCCGCAGCTTGAAGCTCTAGTTGGAAGGCATAGCAG
GAAGCCATGGTCCAGATTCATTAATTCAGATAATCAGCATCTAGTTTCCC
CAGAGGCCATTGATTTTCTTGATAAGCTTCTTCGCTATGATCACCAGGAC
AGGCTTACAGCCAGAGAGGCAATGGCTCATCCTTATTTCTATCAAGTGAG
GGCTGCAGAAAATAGCAGAGTCCGCGCGCATTAGCTCCATGCTTAGTCCC
TTCCTGAGTATACTTGTATTTCATTTGGGCCCATTCTTATGGATGGAGTA
TATTTCTGGTCTATTGATAAGTCGTTGTACCAGTAGTCTATAGGTCGCAT
CCATATTTTCAGATGGTCTATCGACAAGTCGTTGGTAGTATACTTGTATT
TCATTTGAGCTTTAATGTTGCTCGTGTGGACTGTACAGCTTGTTCCGTTG
TGTTTGCCTTATACATGTCAATTATTTGTACAAAATTACAGATAATAACT
CTTCTTTTG
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