CX303385

Overview
NameCX303385
Unique NameCX303385
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: GSK3_DICDI (Glycogen synthase kinase-3 OS=Dictyostelium discoideum GN=gskA PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 8.813e-12
Identity = 43/119 (36.13%), Postives = 66/119 (55.46%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGT---DELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVR 351
            +D+WSLGC+ A ++   +P F G +  DQLV+I KVLGT   ++++A    Y     P+++A        PW R   + +   V  E+ID + K+L YD   RL   E  AHP+F ++R
Sbjct:  236 IDVWSLGCVLAELLLG-QPLFPGENGIDQLVEIIKVLGTPTKEQIHAMNPYYTSFKFPEIKA-------NPWPRVFKAKD---VPAESIDLISKILLYDPSSRLKPVEICAHPFFDELR 343          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: MK12_MOUSE (Mitogen-activated protein kinase 12 OS=Mus musculus GN=Mapk12 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.503e-11
Identity = 44/126 (34.92%), Postives = 72/126 (57.14%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGT------DELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVRAAEN 363
            VD+WS+GC+ A MI  K   F G+D+ DQL +I K+ GT       +L +   K ++E  P+LE       +K ++  + +      SP+A++ L+++L  D + R+TA EA+ HPYF  +R  E+
Sbjct:  207 VDIWSVGCIMAEMITGKI-LFKGNDHLDQLKEIMKITGTPPPEFVQKLQSAEAKNYMEGLPELE-------KKDFASVLTN-----ASPQAVNLLERMLVLDAEQRVTAAEALTHPYFESLRDTED 319          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: KSG8_ARATH (Shaggy-related protein kinase theta OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.503e-11
Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGT---DELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVR 351
            +DMWS GC+ A ++   +P F G    DQLV+I K+LGT   +E+      Y     PQ++A        PW +  +      + PEA+D + +LL+Y    R TA EA AHP+F  +R
Sbjct:  320 IDMWSGGCVMAELLLG-QPLFPGESGIDQLVEIIKILGTPTREEIRCMNPNYTEFKFPQIKA-------HPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTALEACAHPFFDDLR 426          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: KSG5_ARATH (Shaggy-related protein kinase epsilon OS=Arabidopsis thaliana GN=ASK5 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.503e-11
Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGT---DELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVR 351
            +D+WS GC+ A ++   +P F G    DQLV+I KVLGT   +E+      Y     PQ++A        PW +  +        PEA+D + +LL+Y    R TA EA+ HP+F ++R
Sbjct:  256 IDIWSAGCVLAELLLG-QPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKA-------HPWHKIFHKRTP----PEAVDLVSRLLQYSPNLRSTAMEAIVHPFFDELR 362          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: CDC28_CANAL (Cell division control protein 28 OS=Candida albicans GN=CDC28 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.503e-11
Identity = 40/112 (35.71%), Postives = 62/112 (55.36%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 339
            VDMWS+GC+FA M  RK P F G    D++ +I ++LGT     + +  +L   P  ++   +  +KP S  + S     +    ID LD++L YD   R++A+ A+ HPYF
Sbjct:  190 VDMWSVGCIFAEMCNRK-PLFPGDSEIDEIFRIFRILGTPNEEIWPDVNYL---PDFKSSFPQWKKKPLSEAVPS-----LDANGIDLLDQMLVYDPSRRISAKRALIHPYF 292          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: GSK3_SCHPO (Protein kinase gsk3 OS=Schizosaccharomyces pombe GN=gsk3 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 2.564e-11
Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGT---DELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVR 351
            +D+WS GC+ A ++    P F G    DQLV+I K+LGT   +++      Y     PQ+         +P SR  +      V  +A+D L K+L+Y   DRLTA EAM HP+F ++R
Sbjct:  214 IDIWSTGCVMAELMLG-HPLFPGESGIDQLVEIIKILGTPSREQIKTMNPNYMEHRFPQIRP-------QPLSRVFSRS----VPLDALDLLSKMLQYTPTDRLTAAEAMCHPFFDELR 320          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: MSK3_MEDSA (Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa GN=MSK-3 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.349e-11
Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGT---DELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVR 351
            +D+WS GC+  G +   +P F G    DQLV+I KVLGT   +E+      Y     PQ++A        PW +  +      + PEA+D + +LL+Y    R TA EA+ HP++  VR
Sbjct:  256 IDIWSAGCVL-GELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKA-------HPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRSTALEALVHPFYDDVR 362          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: CDKA1_ORYSJ (Cyclin-dependent kinase A-1 OS=Oryza sativa subsp. japonica GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.349e-11
Identity = 42/113 (37.17%), Postives = 60/113 (53.10%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGTDELNAYLEKYHLELDPQLEALVGRHSRKP-WSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYF 339
            VDMWS+GC+FA M+ +K P F G    D+L KI +VLGT    ++         P + +L    S  P W     +     + P  +D L K+LRY+   R+TAR+A+ H YF
Sbjct:  185 VDMWSVGCIFAEMVNQK-PLFPGDSEIDELFKIFRVLGTPNEQSW---------PGVSSLPDYKSAFPKWQAQDLATIVPTLDPAGLDLLSKMLRYEPNKRITARQALEHEYF 287          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: MSK2_MEDSA (Glycogen synthase kinase-3 homolog MsK-2 OS=Medicago sativa GN=MSK-2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.374e-11
Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGT---DELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVR 351
            +D+WS GC+  G +   +P F G    DQLV+I KVLGT   +E+      Y     PQ++A        PW +         + PEA+D + +LL+Y    R TA EA+ HP+F ++R
Sbjct:  256 IDIWSAGCVL-GELLLGQPLFPGASGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKA-------HPWHKIFRKR----MPPEAVDLVSRLLQYSPNLRSTALEALVHPFFDELR 362          
BLAST of CX303385 vs. ExPASy Swiss-Prot
Match: MSK1_TOBAC (Shaggy-related protein kinase NtK-1 OS=Nicotiana tabacum GN=NTK-1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.374e-11
Identity = 41/119 (34.45%), Postives = 64/119 (53.78%), Query Frame = 1
Query:    4 VDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGT---DELNAYLEKYHLELDPQLEALVGRHSRKPWSRFINSDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFYQVR 351
            +D+WS GC+ A ++   +P F G    DQLV+I KVLGT   +E+      Y+    PQ++A        PW +  +      + PEA+D + +LL+Y    R TA EA+ H +F ++R
Sbjct:  255 IDIWSAGCVLAELLLG-QPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYNEFKFPQIKA-------HPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTALEAVTHAFFDELR 361          
The following BLAST results are available for this feature:
BLAST of CX303385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
GSK3_DICDI8.813e-1236.13Glycogen synthase kinase-3 OS=Dictyostelium discoi... [more]
MK12_MOUSE1.503e-1134.92Mitogen-activated protein kinase 12 OS=Mus musculu... [more]
KSG8_ARATH1.503e-1136.13Shaggy-related protein kinase theta OS=Arabidopsis... [more]
KSG5_ARATH1.503e-1135.29Shaggy-related protein kinase epsilon OS=Arabidops... [more]
CDC28_CANAL1.503e-1135.71Cell division control protein 28 OS=Candida albica... [more]
GSK3_SCHPO2.564e-1136.13Protein kinase gsk3 OS=Schizosaccharomyces pombe G... [more]
MSK3_MEDSA3.349e-1135.29Glycogen synthase kinase-3 homolog MsK-3 OS=Medica... [more]
CDKA1_ORYSJ3.349e-1137.17Cyclin-dependent kinase A-1 OS=Oryza sativa subsp.... [more]
MSK2_MEDSA4.374e-1135.29Glycogen synthase kinase-3 homolog MsK-2 OS=Medica... [more]
MSK1_TOBAC4.374e-1134.45Shaggy-related protein kinase NtK-1 OS=Nicotiana t... [more]

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Properties
Property NameValue
Genbank descriptionC08030F09SK PhyRootSw1 Citrus sinensis cDNA clone C08030F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX303385 ID=CX303385; Name=CX303385; organism=Citrus sinensis; type=EST; length=659bp
GAGGTGGACATGTGGAGCCTCGGCTGTATGTTTGCAGGAATGATTTTTCG
CAAGGAACCATTCTTTTATGGTCATGACAATCAAGACCAGCTTGTCAAAA
TTGCAAAGGTTCTGGGAACCGATGAGTTAAATGCATACTTGGAAAAATAT
CATTTAGAGCTTGATCCGCAGCTTGAAGCTCTAGTTGGAAGGCATAGCAG
GAAGCCATGGTCCAGATTCATTAATTCAGATAATCAGCATCTAGTTTCCC
CAGAGGCCATTGATTTTCTTGATAAGCTTCTTCGCTATGATCACCAGGAC
AGGCTTACAGCCAGAGAGGCAATGGCTCATCCTTATTTCTATCAAGTGAG
GGCTGCAGAAAATAGCAGAGTCCGCGCGCATTAGCTCCATGCTTAGTCCC
TTCCTGAGTATACTTGTATTTCATTTGGGCCCATTCTTATGGATGGAGTA
TATTTCTGGTCTATTGATAAGTCGTTGTACCAGTAGTCTATAGGTCGCAT
CCATATTTTCAGATGGTCTATCGACAAGTCGTTGGTAGTATACTTGTATT
TCATTTGAGCTTTAATGTTGCTCGTGTGGACTGTACAGCTTGTTCCGTTG
TGTTTGCCTTATACATGTCAATTATTTGTACAAAATTACAGATAATAACT
CTTCTTTTG
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