CX043577

Overview
NameCX043577
Unique NameCX043577
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.318e-41
Identity = 66/115 (57.39%), Postives = 86/115 (74.78%), Query Frame = -2
Query:  217 AEKGLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQR 561
            A +G+G+G+EL+NNPDL+ATDP++SFK+AIWFWMT Q  KPSCH VII +W PS  D  A R+ GYG+ +NIING  ECG G N A  +RIGF+  +CG   +  G++LDC NQ+
Sbjct:  134 AGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDCNNQK 248          

HSP 2 Score: 32.7278 bits (73), Expect = 4.318e-41
Identity = 13/21 (61.90%), Postives = 16/21 (76.19%), Query Frame = -1
Query:  554 KYYGRGPIQLSWNYNYLRCGE 616
            +YYGRGPIQL+   NY R G+
Sbjct:  116 RYYGRGPIQLTHQSNYERAGQ 136          
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 4.320e-41
Identity = 70/120 (58.33%), Postives = 86/120 (71.67%), Query Frame = -2
Query:  208 YGAEKGLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRP*G 567
            YGA  G  IG  LLNNPDL+A D V+SFK+A+WFWMTAQ PKPS H+VI   W PS  D   GR+ G+G+ +NIINGG+EC  G NA + NRIGF+  +C   G+ PG++LDC NQRP G
Sbjct:  128 YGAA-GSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNLDCANQRPFG 246          

HSP 2 Score: 36.5798 bits (83), Expect = 4.320e-41
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = -1
Query:  557 KYYGRGPIQLSWNYNYLRCG 616
            KY+GRGPIQ+S+NYNY   G
Sbjct:  113 KYFGRGPIQISYNYNYGAAG 132          
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 7.308e-41
Identity = 69/128 (53.91%), Postives = 91/128 (71.09%), Query Frame = -2
Query:  184 YGAEKGLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRP*GLNLMAQSM 567
            YG + G  IG +L+NNPDL+ATD V+SFK+A WFWMT Q PKPSCH VI   W PS  D +AGRL G+G+ +NIINGG+ECG+G    V++RIGF+  +C    +  G++LDC NQRP G  L+  ++
Sbjct:  188 YG-QAGKAIGVDLVNNPDLVATDAVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDCNNQRPFGSGLLLDTI 314          

HSP 2 Score: 39.2762 bits (90), Expect = 7.308e-41
Identity = 15/21 (71.43%), Postives = 19/21 (90.48%), Query Frame = -1
Query:  554 KYYGRGPIQLSWNYNYLRCGE 616
            KYYGRGPIQ+S+NYNY + G+
Sbjct:  173 KYYGRGPIQISYNYNYGQAGK 193          
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 9.511e-41
Identity = 70/124 (56.45%), Postives = 85/124 (68.55%), Query Frame = -2
Query:  214 LGITITYGAEKGLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRP 585
            L     YG   G  IG +LL+NPDL+ATD  +SFK+A+WFWMT Q  KPS H+VI   W PS  D  AGR  GYG+ +NI+NGG+ECG G +  V NRIGF+  +CG FGI  G +LDCYNQRP
Sbjct:  206 LSFNFNYGPA-GRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRP 328          

HSP 2 Score: 36.5798 bits (83), Expect = 9.511e-41
Identity = 14/16 (87.50%), Postives = 16/16 (100.00%), Query Frame = -1
Query:  569 KYYGRGPIQLSWNYNY 616
            KYYGRGPIQLS+N+NY
Sbjct:  197 KYYGRGPIQLSFNFNY 212          
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.620e-40
Identity = 67/113 (59.29%), Postives = 84/113 (74.34%), Query Frame = -2
Query:  214 GLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRP 552
            G  IG +LL NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI  +W PS  D  AGR  G+G+ +NIINGG+ECG G ++ V +RIGF+  +C   G+  GD+LDCYNQRP
Sbjct:  152 GRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRP 264          

HSP 2 Score: 35.8094 bits (81), Expect = 1.620e-40
Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = -1
Query:  569 KYYGRGPIQLSWNYNY 616
            +YYGRGPIQLS NYNY
Sbjct:  133 RYYGRGPIQLSHNYNY 148          
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 6.089e-40
Identity = 69/112 (61.61%), Postives = 85/112 (75.89%), Query Frame = -2
Query:  217 GLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQR 552
            G  IG+EL+NNPDL+ATD  +SFK+AIWFWMT Q  KPS H+VII  W PSA D  A R+ GYG+ +NIINGGIECG G N AV +RIG++  +CG   + PG++LDCYNQR
Sbjct:  137 GTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQR 248          

HSP 2 Score: 30.0314 bits (66), Expect = 6.089e-40
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = -1
Query:  557 KYYGRGPIQLSWNYNYLRCG 616
            +YYGRGPIQL+   NY + G
Sbjct:  118 RYYGRGPIQLTNRNNYEKAG 137          
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 7.906e-40
Identity = 66/112 (58.93%), Postives = 84/112 (75.00%), Query Frame = -2
Query:  217 GLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQR 552
            G  I E+L+NNPDLL+T+P +SFK+AIWFWMT Q  KPS H+VI   W PSA D +AGR+ GYG+ +NIINGGIECG G +  V +R+GF+  +C  FG+ PG +LDC NQR
Sbjct:  206 GQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDCNNQR 317          

HSP 2 Score: 36.5798 bits (83), Expect = 7.906e-40
Identity = 15/21 (71.43%), Postives = 17/21 (80.95%), Query Frame = -1
Query:  554 KYYGRGPIQLSWNYNYLRCGE 616
            KYYGRGPIQL+ NYNY   G+
Sbjct:  187 KYYGRGPIQLTHNYNYGLAGQ 207          
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4)

HSP 1 Score: 149.443 bits (376), Expect = 1.030e-39
Identity = 65/113 (57.52%), Postives = 85/113 (75.22%), Query Frame = -2
Query:  214 GLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRP 552
            G  IG +LL NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI  +W PS  D  AGR+ G+G+ +NI+NGGIECG G ++ V +RIGF+  +C   G+  G++LDCY+QRP
Sbjct:  204 GRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRP 316          

HSP 2 Score: 35.039 bits (79), Expect = 1.030e-39
Identity = 14/15 (93.33%), Postives = 14/15 (93.33%), Query Frame = -1
Query:  569 YYGRGPIQLSWNYNY 613
            YYGRGPIQLS NYNY
Sbjct:  186 YYGRGPIQLSHNYNY 200          
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.753e-39
Identity = 66/113 (58.41%), Postives = 84/113 (74.34%), Query Frame = -2
Query:  214 GLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRP 552
            G  IG +LL NPDL+ATD  + FK+AIWFWMTAQPPKPS H VI  +W PS  D  AGR+ G+G+ +NIINGGIECG G ++ V +RIGF+  +C   G+  G++LDCY+QRP
Sbjct:  152 GRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRP 264          

HSP 2 Score: 35.8094 bits (81), Expect = 1.753e-39
Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = -1
Query:  569 KYYGRGPIQLSWNYNY 616
            +YYGRGPIQLS NYNY
Sbjct:  133 RYYGRGPIQLSHNYNY 148          
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.278e-39
Identity = 65/113 (57.52%), Postives = 84/113 (74.34%), Query Frame = -2
Query:  214 GLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRP 552
            G  IG +LL NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI  +W PS  D  AGR+ G+G+ +NI+NGGIECG G ++ V +RIGF+  +C    +  G++LDCYNQRP
Sbjct:  207 GRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILRVGYGNNLDCYNQRP 319          

HSP 2 Score: 35.039 bits (79), Expect = 2.278e-39
Identity = 14/15 (93.33%), Postives = 14/15 (93.33%), Query Frame = -1
Query:  569 YYGRGPIQLSWNYNY 613
            YYGRGPIQLS NYNY
Sbjct:  189 YYGRGPIQLSHNYNY 203          
The following BLAST results are available for this feature:
BLAST of CX043577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHIA_SOLLC4.318e-4157.39Acidic 26 kDa endochitinase OS=Solanum lycopersicu... [more]
CHID_SOLLC4.320e-4158.33Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHIB_VITVI7.308e-4153.91Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE... [more]
CHI2_ORYSJ9.511e-4156.45Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIC_SECCE1.620e-4059.29Basic endochitinase C OS=Secale cereale GN=rscc PE... [more]
CHIQ_TOBAC6.089e-4061.61Acidic endochitinase Q OS=Nicotiana tabacum PE=1 S... [more]
CHIX_PEA7.906e-4058.93Endochitinase OS=Pisum sativum PE=2 SV=1[more]
CHI1_HORVU1.030e-3957.5226 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=... [more]
CHI2_HORVU1.753e-3958.4126 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=... [more]
CHIA_SECCE2.278e-3957.52Basic endochitinase A OS=Secale cereale GN=rsca PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12A09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12A09-A18-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043577 ID=CX043577; Name=CX043577; organism=Citrus sinensis; type=EST; length=619bp
CCCCCCCTTTTTTTGATGGTGAAGACTCATCGATCCATGTTGGATCAGTC
TTATTTAATTTACTTACAATAAGAGCGTAACAAACTAACAATTTAGTTGA
CCACCTACAAGTGTGACATCTAAAGTTTTTATTAAGTAGCTTTTATTAAG
CTTATTTTACTAAAACGTTGATCATGATGATCACATAGATTGTGCCATCA
GATTAAGGCCTTAAGGTCGTTGGTTGTAGCAATCAAGACTGTCACCAGGC
TGAATCCCAAACTTGCCACAGAAAGTGGTAAAGAACCCAATACGGTTACG
TACAGCGGCATTCCCACCTTGGCCACATTCAATTCCACCGTTGATTATAT
TTGAGGTTAGACCGTATCCTTTAAGCCGGCCGGCGTTTACGTCATTTGCT
GATGGTTTCCATTCTTCGATAATGACTTCGTGGCACGATGGCTTTGGTGG
CTGTGCAGTCATCCAGAACCAGATTGCTGACTTGAATGATAGTACTGGAT
CAGTAGCAAGAAGGTCTGGATTGTTCAACAACTCCTCTCCTATCCCTAGG
CCTTTCTCCGCACCGTAAGTAATTGTAATTCCAAGAGAGTTGAATTGGAC
CTCGGCCATAGTACTTCCC
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