CX043577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.882e-39 Identity = 68/112 (60.71%), Postives = 86/112 (76.79%), Query Frame = -2 Query: 217 GLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQR 552 G IG++L+NNPDL+ATD +SFK+AIWFWMTAQ KPSCH+VI +W PSA D +A R GYG+ +NIINGGIECG+G N V +RIGF+ +C + PGD+LDCY+QR Sbjct: 131 GQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDCYDQR 242 HSP 2 Score: 27.335 bits (59), Expect = 3.882e-39 Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = -1 Query: 554 YYGRGPIQLSWNYNYLRCGE 613 +YGRGPIQL+ NY G+ Sbjct: 113 FYGRGPIQLTGQSNYDLAGQ 132
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 5.043e-39 Identity = 63/96 (65.62%), Postives = 79/96 (82.29%), Query Frame = -2 Query: 265 GLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGGNAAVRNRIGFFTTFCG 552 G IG +LLNNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VII W+PSA D A RL G+G+ +NIINGG+ECG+G ++ V++RIGF+ +CG Sbjct: 206 GRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVIIGRWQPSAADRAANRLPGFGVITNIINGGLECGRGSDSRVQDRIGFYRRYCG 301 HSP 2 Score: 38.1206 bits (87), Expect = 5.043e-39 Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = -1 Query: 557 KYYGRGPIQLSWNYNYLRCG 616 KY+GRGPIQ+S NYNY CG Sbjct: 187 KYFGRGPIQISHNYNYGPCG 206
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.587e-39 Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = -2 Query: 217 GLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQR 552 G I ++L+NNPDL+ATD +SFK+AIWFWMT Q KPS H+VII W PSA D +A R G G+ +NIINGGIECG G NAAV +RIG++ +CG + PGD+LDCYNQR Sbjct: 137 GNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDCYNQR 248 HSP 2 Score: 30.4166 bits (67), Expect = 6.587e-39 Identity = 13/24 (54.17%), Postives = 16/24 (66.67%), Query Frame = -1 Query: 545 KYYGRGPIQLSWNYNYLRCGERPR 616 +YYGRGPIQL+ NY + G R Sbjct: 118 RYYGRGPIQLTNQNNYEKAGNAIR 141
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 7.532e-39 Identity = 74/131 (56.49%), Postives = 94/131 (71.76%), Query Frame = -2 Query: 193 LGITITYGAEKGLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRP*GLNLMA 585 L YG G IGE+LLNNP+L+A+DPV+SFK+A+WFWMT Q PKPSCH+VI +W PS+ D+ AGR+ GYG+ +NIINGG+ECG G + V NRIGF+ +C GI G +LDCY+QRP L A Sbjct: 203 LSYNYNYGPA-GEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDCYDQRPFNSGLTA 332
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 4.882e-38 Identity = 72/125 (57.60%), Postives = 88/125 (70.40%), Query Frame = -2 Query: 214 ITITYG---AEKGLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRP 579 I ITY G IG +LLNNPDL+A+D +SFK+A WFWMT Q PKPSCH VI +W PSA+D AGR+ GYG +NIINGG+ECG G + V +RIGF+ +C G+ GD+LDCYNQRP Sbjct: 192 IQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDCYNQRP 316
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 2.673e-37 Identity = 66/112 (58.93%), Postives = 83/112 (74.11%), Query Frame = -2 Query: 217 GLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQR 552 G I ++L+NNPDL+ATD +SFK+AIWFWMT Q KPSCH+VI W PSA D +A R+ GYG+ +NIINGGIECG+G NA V +RIG++ + PGD+LDCYNQR Sbjct: 138 GKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNLDCYNQR 249 HSP 2 Score: 28.4906 bits (62), Expect = 2.673e-37 Identity = 12/20 (60.00%), Postives = 14/20 (70.00%), Query Frame = -1 Query: 554 YYGRGPIQLSWNYNYLRCGE 613 YYGRGPIQL+ NY G+ Sbjct: 120 YYGRGPIQLTGQSNYDLAGK 139
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.695e-37 Identity = 66/112 (58.93%), Postives = 83/112 (74.11%), Query Frame = -2 Query: 217 GLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQR 552 G +G +L+ NPDL++TD V+SFK+AIWFWMTAQ KPSCH+VI+ W PSA D AGR+ GYG+ +NIINGGIECG G N A +RIG++ +C G G +LDCYNQR Sbjct: 146 GNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDCYNQR 257 HSP 2 Score: 29.261 bits (64), Expect = 7.695e-37 Identity = 12/19 (63.16%), Postives = 13/19 (68.42%), Query Frame = -1 Query: 557 YYGRGPIQLSWNYNYLRCG 613 YYGRGPIQL+ NY G Sbjct: 128 YYGRGPIQLTGQSNYQAAG 146
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 2.216e-36 Identity = 59/116 (50.86%), Postives = 88/116 (75.86%), Query Frame = -2 Query: 208 GLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQG-GNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRP*G 552 G +G +L+NNPDL+++DPV++F++AIWFWMTAQ PKPSCH+VI +W PS +D ++GRL GYG+ +NIINGG ECG+G ++R+G++ +C F + GD++ C +Q+P G Sbjct: 139 GDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIACRDQKPYG 254 HSP 2 Score: 33.113 bits (74), Expect = 2.216e-36 Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = -1 Query: 554 YYGRGPIQLSWNYNYLRCGE 613 YYGRGPIQL+ YNY G+ Sbjct: 121 YYGRGPIQLTHKYNYQLAGD 140
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 2.679e-36 Identity = 69/113 (61.06%), Postives = 82/113 (72.57%), Query Frame = -2 Query: 196 LLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGG-NAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRP*GLNLM 531 LL P+L+ TDP ++FK+A+WFWMT Q PKPSCH VI E W PSA D AGR+ GYG+ +NIINGGIECGQGG N A NRIGF+ T+C G G +LDCY QRP G L+ Sbjct: 185 LLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNLDCYQQRPFGYGLL 297
BLAST of CX043577 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.150e-33 Identity = 60/118 (50.85%), Postives = 80/118 (67.80%), Query Frame = -2 Query: 214 YGAEKGLGIGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIEEWKPSANDVNAGRLKGYGLTSNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRP 567 YGA G IG +LL NPDL+ +D + FK+A+WFWMT Q PKPS H+VI W PS+ D AGR+ GYG+ +NII+GG+ECG+G + V +RIG++ D+LDCYNQ+P Sbjct: 93 YGAA-GKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYK-----------DNLDCYNQKP 198 HSP 2 Score: 35.039 bits (79), Expect = 2.150e-33 Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = -1 Query: 554 YYGRGPIQLSWNYNYLRCGE 613 Y+GRGPIQ+S+NYNY G+ Sbjct: 79 YFGRGPIQISYNYNYGAAGK 98 The following BLAST results are available for this feature:
BLAST of CX043577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043577 ID=CX043577; Name=CX043577; organism=Citrus sinensis; type=EST; length=619bpback to top |