CV713174

Overview
NameCV713174
Unique NameCV713174
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: P2C27_ORYSJ (Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.356e-27
Identity = 65/167 (38.92%), Postives = 97/167 (58.08%), Query Frame = -3
Query:  356 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 856
            TA  A+I  + L+VANAGD R VLSR+G A+ +SKDH+     E+ RI   GG++  G +NG L + RA+GD   +  K +      ++A P++  I L  +DEFL+I  DGIWD  S+Q  VDF R +L     L + C+++ +  +   A     DN+T ++V F
Sbjct:  157 TALTAMIFGRSLLVANAGDCRAVLSRRGTAIEMSKDHRTCCLNERKRIESLGGYVDDGYLNGQLAVTRALGDWHLEGLKEVGEPGGPLSAEPELKMITLTKEDEFLIIGSDGIWDFFSNQNAVDFTRKRLQEHNDLRLCCKQIVEEAIRRGAS----DNLTAVMVSF 319          
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: P2C27_ARATH (Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.356e-27
Identity = 68/167 (40.72%), Postives = 97/167 (58.08%), Query Frame = -3
Query:  356 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 856
            TA  A I  ++L++ANAGD R VL R+G+A+ LSKDHKP+   EK RI K GG +  G +NG L++ARAIGD   K  K        ++  P++   +L +DDEFL++ CDG+WD +SSQ  V   R +L           ++    L  +     CDN+T+I+V F
Sbjct:  185 TALTAFIFGRRLIIANAGDCRAVLGRRGRAIELSKDHKPNCTAEKVRIEKLGGVVYDGYLNGQLSVARAIGDWHMKGPKGSACP---LSPEPELQETDLSEDDEFLIMGCDGLWDVMSSQCAVTIARKELMIHNDPERCSRELVREALKRNT----CDNLTVIVVCF 344          
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: P2C22_ARATH (Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana GN=At2g25620 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.356e-27
Identity = 70/167 (41.92%), Postives = 102/167 (61.08%), Query Frame = -3
Query:  362 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGD--VEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILV 856
            TA  AI+  + LVVANAGD R VLSR+G+A+ +S+DHKP    E+ RI  +GG +  G +NG LN+ARA+GD  +E    K   ++   + A P++ T +L ++DEFL+I CDG+WD   SQ  VDF R +L  E    V+C K     +  +   +  DN+T ++V
Sbjct:  192 TALAAILFGRSLVVANAGDCRAVLSRQGKAIEMSRDHKPMSSKERRRIEASGGHVFDGYLNGQLNVARALGDFHMEGMKKKKDGSDCGPLIAEPELMTTKLTEEDEFLIIGCDGVWDVFMSQNAVDFARRRL-QEHNDPVMCSK---ELVEEALKRKSADNVTAVVV 354          
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: PPMBL_MOUSE (Probable protein phosphatase 1B-like OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.854e-27
Identity = 62/167 (37.13%), Postives = 99/167 (59.28%), Query Frame = -3
Query:  356 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 856
            TA   ++  + L +A+ GDSR +LSR G     ++DH+P    E++RI  AGG ++  RV GSL ++RA+GD  +K     P E Q+V+A P+++ +   D+DEF+++A DG+WD LS  +L   V  +L     L ++C ++ D CL   +     DNMT ++V F
Sbjct:  157 TAVALLVSPRFLYLAHCGDSRALLSRSGSVAFCTEDHRPHRPRERERIHDAGGTVRRRRVEGSLAVSRALGDFAYKQAPGRPPELQLVSAEPEVAALARQDEDEFVLLASDGVWDALSGADLAGLVTSRLRLGLDLELLCAQLLDTCLCKGS----LDNMTCMVVCF 319          
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: P2C54_ORYSJ (Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.527e-26
Identity = 65/169 (38.46%), Postives = 95/169 (56.21%), Query Frame = -3
Query:  350 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKI 856
            TA  A+I  + L++ANAGD R VLSR G A+ +S DH+P    EK R+   GG++  G +NG L + RA+GD   +  K        ++A P++  I L  DDEFL+I  DGIWD  S+Q +VDF R +L     +   C ++ +  +   A     DN+T +LV F +
Sbjct:  163 TALTAMIFGRTLLIANAGDCRAVLSRCGTAIEMSVDHRPCSLSEKLRVESLGGYVDDGYLNGLLGVTRALGDWHLEGMKEAGNPGGPLSAEPELKMITLTKDDEFLIIGSDGIWDVFSNQNVVDFARRRLQEHNDVKSCCREIVEEAIKRGA----TDNLTAVLVSFHL 327          
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: P2C19_ORYSJ (Probable protein phosphatase 2C 19 OS=Oryza sativa subsp. japonica GN=Os02g0599700 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.293e-25
Identity = 72/168 (42.86%), Postives = 92/168 (54.76%), Query Frame = -3
Query:  353 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 856
            TACV +IR  QL+V +AGDSRCVLSR GQA  LS DHKPD                               D   K N+ LP E Q++T NPDI T+++ DD EFLVIA +G+W  +++Q +VD   D+L    +  VICE++    L PS      DN T+ILV FK
Sbjct:  387 TACVVVIRGNQLIVGHAGDSRCVLSRNGQASALSVDHKPDR------------------------------DFACKKNERLPPEDQMLTCNPDILTMDITDDMEFLVIATEGLWCNMTNQNVVDHTHDRLLEGAEARVICEELVQFGL-PSG-----DNTTVILVLFK 518          
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: PP2C4_YEAST (Protein phosphatase 2C homolog 4 OS=Saccharomyces cerevisiae GN=PTC4 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.205e-25
Identity = 76/188 (40.43%), Postives = 102/188 (54.26%), Query Frame = -3
Query:  362 TACVA-IIRDKQLVVANAGDSRCVLSRKGQALN-LSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFK------------------LNKSLPAEKQIVTANPDISTIEL-CDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAP--SAGGEGCDNMTMILV 856
            TA VA II ++ L VAN GDSRC+LS K   +  +S DHKP    E  RI   GG + +GRV G L L+RA  D +FK                  L    P ++  VT  PD+   ++    DEFLV+ACDGIWD  ++++L+ F++  L + TKL  I  K+ D  +A   S  G G DNMT I+V
Sbjct:  179 TAVVACIINEESLYVANCGDSRCILSSKSNGIKTMSFDHKPQHIGELIRINDNGGTVSLGRVGGVLALSRAFSDFQFKRGVTYPHRRTKLTNITQNLTYGTPPQEAQVTVEPDVLMHKIDYSKDEFLVLACDGIWDIYNNKQLIHFIKYHLVSGTKLDTIITKLLDHGIAQANSNTGVGFDNMTAIIV 366          
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: P2C13_ARATH (Probable protein phosphatase 2C 13 OS=Arabidopsis thaliana GN=At1g48040 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.205e-25
Identity = 73/181 (40.33%), Postives = 106/181 (58.56%), Query Frame = -3
Query:  314 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKILSNNGPSAAEQP 856
            TA  A+I  + L+VANAGD R VL R+G A+++S DH+   E E+ RI   GG+ + G +NG L + RAIGD E K N    +   ++ ++P+I  I L +DDEFL++ACDGIWD LSSQ  V  VR  L           ++       +A  +  DNMT+I++ F    ++ PS+ +QP
Sbjct:  189 TALTALIIGRHLLVANAGDCRAVLCRRGVAVDMSFDHRSTYEPERRRIEDLGGYFEDGYLNGVLAVTRAIGDWELK-NPFTDSSSPLI-SDPEIGQIILTEDDEFLILACDGIWDVLSSQNAVSNVRQGLRRHGDPRQCAMELGKE----AARLQSSDNMTVIVICF----SSVPSSPKQP 359          
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: PPMBL_HUMAN (Probable protein phosphatase 1B-like OS=Homo sapiens PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.880e-25
Identity = 64/167 (38.32%), Postives = 97/167 (58.08%), Query Frame = -3
Query:  356 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 856
            TA V ++  + L +A+ GDSR VLSR G     ++DH+P    E++RI  AGG I+  RV GSL ++RA+GD  +K     P E Q+V+A P+++ +    +DEF+++A DG+WD +S   L   V  +L       ++C ++ D CL   +     DNMT ILV F
Sbjct:  164 TAVVLLVSPRFLYLAHCGDSRAVLSRAGAVAFSTEDHRPLRPRERERIHAAGGTIRRRRVEGSLAVSRALGDFTYKEAPGRPPELQLVSAEPEVAALARQAEDEFMLLASDGVWDTVSGAALAGLVASRLRLGLAPELLCAQLLDTCLCKGS----LDNMTCILVCF 326          
BLAST of CV713174 vs. ExPASy Swiss-Prot
Match: P2C49_ARATH (Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.880e-25
Identity = 70/168 (41.67%), Postives = 99/168 (58.93%), Query Frame = -3
Query:  356 TACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI-QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 856
            TA  A+I  + L+VANAGD R VL RKG+A+++S+DHKP   +E+ R+ ++GGFI   G +N  L + RA+GD + KL       +  + + P+I  I L +DDEFLVI CDGIWD L+SQE V  VR  L      +    ++    L    G    DN+T ++V F
Sbjct:  189 TALTALICGRLLMVANAGDCRAVLCRKGRAIDMSEDHKPINLLERRRVEESGGFITNDGYLNEVLAVTRALGDWDLKLPH---GSQSPLISEPEIKQITLTEDDEFLVIGCDGIWDVLTSQEAVSIVRRGLNRHNDPTRCARELVMEAL----GRNSFDNLTAVVVCF 349          
The following BLAST results are available for this feature:
BLAST of CV713174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
P2C27_ORYSJ2.356e-2738.92Probable protein phosphatase 2C 27 OS=Oryza sativa... [more]
P2C27_ARATH2.356e-2740.72Probable protein phosphatase 2C 27 OS=Arabidopsis ... [more]
P2C22_ARATH2.356e-2741.92Probable protein phosphatase 2C 22 OS=Arabidopsis ... [more]
PPMBL_MOUSE6.854e-2737.13Probable protein phosphatase 1B-like OS=Mus muscul... [more]
P2C54_ORYSJ1.527e-2638.46Probable protein phosphatase 2C 54 OS=Oryza sativa... [more]
P2C19_ORYSJ1.293e-2542.86Probable protein phosphatase 2C 19 OS=Oryza sativa... [more]
PP2C4_YEAST2.205e-2540.43Protein phosphatase 2C homolog 4 OS=Saccharomyces ... [more]
P2C13_ARATH2.205e-2540.33Probable protein phosphatase 2C 13 OS=Arabidopsis ... [more]
PPMBL_HUMAN2.880e-2538.32Probable protein phosphatase 1B-like OS=Homo sapie... [more]
P2C49_ARATH2.880e-2541.67Probable protein phosphatase 2C 49 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002G23_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV713174 ID=CV713174; Name=CV713174; organism=Citrus sinensis; type=EST; length=858bp
GCTCACATTGTGGAATTGAAAGACACTATTCTCAGTAGTGATTTCAATTT
TGAAAACAAACCAGAGTAAAAGTACACACATGTACAGAGATCTTTAAGGA
TTATCTATCCCATTAAAATGAAAAAGCTTAAATATTTACAACCAAATCAT
GAGAATCGTTTTCCGAATGTAAAATCAGGGACCATGGTTCTGAGCTCAGC
AGTGTTTCAGACAGTAGAAAATGAGTACCATTTAGTCAGTGCAAAGAGTG
CTACAGCTAATTCGATTCAGTCCCTGCTGAACTGCTGGCTAACTTGGATT
GTTGGTCAGATGGTGGCTGCTCAGCCGCAGAAGGACCATTATTAGAAAGA
ATTTTAAACTGAACCAAGATCATGGTCATGTTGTCGCATCCTTCACCACC
AGCTGATGGAGCCAAGCACCGATCGAATACTTTCTCGCAAATGACTGATA
GTTTTGTTTCGTTGGTTAATTGATCCCTGACAAAATCGACAAGTTCTTGA
CTTGAAAGGCAATCCCAAATCCCATCACAAGCTATGACAAGAAACTCATC
GTCATCACAAAGTTCAATAGTACTTATATCAGGATTGGCAGTCACAATCT
GTTTTTCAGCAGGCAAACTTTTGTTTAGCTTGAACTCCACATCTCCAATA
GCTCTCGCCAAATTTAAACTTCCATTAACACGTCCAACTTGTATAAAACC
ACCAGCTTTGAGAATTCTATCTTTCTCAACCTCAAGATCAGGCTTATGGT
CTTTAGATAGATTAAGTGCCTGGCCCTTCCTCGATAACACACAACGAGAA
TCACCAGCATTTGCAACCACGAGTTGCTTGTCTCTAATGATTGCTACGCA
AGCTGTAC
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