CV713169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV713169 vs. ExPASy Swiss-Prot
Match: RL18_DROPS (60S ribosomal protein L18 OS=Drosophila pseudoobscura pseudoobscura GN=RpL18 PE=3 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.835e-36 Identity = 74/111 (66.67%), Postives = 89/111 (80.18%), Query Frame = -3 Query: 387 DKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRFKGRKFERARGKRNSRGFR 719 + VVVGTVTDD R+ VP L + AL T+TAR RI KAGGE LTFDQLAL++P G+NT+LL+G + AR A KHFG APGVPHSHT+PYVR KGRKFERARG+R+S G++ Sbjct: 78 ESTVVVVGTVTDDARLLVVPKLTLCALHVTQTARERILKAGGEVLTFDQLALKSPTGKNTLLLQGKRTARTACKHFGKAPGVPHSHTRPYVRSKGRKFERARGRRSSCGYK 188
BLAST of CV713169 vs. ExPASy Swiss-Prot
Match: RL18A_XENLA (60S ribosomal protein L18-A OS=Xenopus laevis GN=rpl18-A PE=2 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.835e-36 Identity = 72/113 (63.72%), Postives = 89/113 (78.76%), Query Frame = -3 Query: 387 KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRFKGRKFERARGKRNSRGFR 725 +E+K AVVVG +T D+R++++P L V AL+ T AR+RI KAGG+ +TFDQLAL AP GQNTVLL GP+ ARE +HFG AP PHS TKPYV KGRKFERARG+R SRG++ Sbjct: 75 RENKTAVVVGCITADVRIHDIPKLTVCALKLTSGARSRILKAGGQIMTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAPSTPHSRTKPYVLSKGRKFERARGRRASRGYK 187
BLAST of CV713169 vs. ExPASy Swiss-Prot
Match: RL18_ANOGA (60S ribosomal protein L18 OS=Anopheles gambiae GN=RpL18 PE=3 SV=3) HSP 1 Score: 149.058 bits (375), Expect = 2.400e-35 Identity = 71/117 (60.68%), Postives = 96/117 (82.05%), Query Frame = -3 Query: 387 MKGKEDK-IAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRFKGRKFERARGKRNSRGFR 734 ++GK++K +AVV+GTVT+D+R+ +VP L V ALR T+ AR RI K GG+ TFDQLAL +P G+NTVL++G + ARE KHFG APGVPHS+T+PYV+ KGRKFE+ARG+R+S G++ Sbjct: 72 LRGKDEKSVAVVIGTVTNDVRMMDVPKLNVCALRVTDKARQRILKNGGKIYTFDQLALLSPTGRNTVLMQGKRTAREVFKHFGRAPGVPHSNTRPYVQSKGRKFEKARGRRSSCGYK 188
BLAST of CV713169 vs. ExPASy Swiss-Prot
Match: RL18B_SCHPO (60S ribosomal protein L18-B OS=Schizosaccharomyces pombe GN=rpl18b PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.982e-35 Identity = 77/113 (68.14%), Postives = 86/113 (76.11%), Query Frame = -3 Query: 384 EDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRFKGRKFERARGKRNSRGFRV 722 E K V+VGTVTDD R+ VP L V ALRFT++ARARI KAGGE LT DQLALRAP G NTVLLRG K+AREA +HFG PH H PYVR +GRKFERARG+R SR F+V Sbjct: 78 EGKTTVIVGTVTDDERLLTVPKLSVAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLLRGKKHAREAYRHFGFG---PHKHKAPYVRSEGRKFERARGRRKSRAFKV 187
BLAST of CV713169 vs. ExPASy Swiss-Prot
Match: RL18_SPOFR (60S ribosomal protein L18 OS=Spodoptera frugiperda GN=RpL18 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.118e-35 Identity = 75/109 (68.81%), Postives = 86/109 (78.90%), Query Frame = -3 Query: 399 KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRFKGRKFERARGKRNS 725 +E IAVVVGT+T+D+R+Y+VP + V AL TE ARARI AGGE LTFDQLALRAP G TVLL+G +NAREAV+HFGPAPG P SHTKPYVR KG ERAR +R S Sbjct: 75 REGMIAVVVGTITNDVRLYKVPKMSVAALHVTEKARARILAAGGEILTFDQLALRAPTGAKTVLLQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--ERARPRRRS 181
BLAST of CV713169 vs. ExPASy Swiss-Prot
Match: RL18A_SCHPO (60S ribosomal protein L18-A OS=Schizosaccharomyces pombe GN=rpl18a PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.031e-34 Identity = 75/113 (66.37%), Postives = 87/113 (76.99%), Query Frame = -3 Query: 384 EDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRFKGRKFERARGKRNSRGFRV 722 ++K VVVGTVTDD R+ VP L + ALRFT++ARARI KAGGE LT DQLALRAP G NTVL+RG K+AREA +HFG PH H PYVR +GRKFERARG+R SR F+V Sbjct: 78 QNKTTVVVGTVTDDERMLTVPKLSIAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLVRGKKHAREAYRHFGFG---PHKHKAPYVRSEGRKFERARGRRKSRAFKV 187
BLAST of CV713169 vs. ExPASy Swiss-Prot
Match: RL18_YEAST (60S ribosomal protein L18 OS=Saccharomyces cerevisiae GN=RPL18A PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.719e-34 Identity = 71/116 (61.21%), Postives = 87/116 (75.00%), Query Frame = -3 Query: 384 KGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRFKGRKFERARGKRNSRGFRV 731 +G +K VVVGTVTDD R++E P V ALRFT ARA+I KAGGEC+T DQLA+RAP GQNT++LRGP+N+REAV+HFG PH P + GRKFERARG+R S+GF+V Sbjct: 74 EGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMG---PHKGKAPRILSTGRKFERARGRRRSKGFKV 186
BLAST of CV713169 vs. ExPASy Swiss-Prot
Match: RL18_BOMMO (60S ribosomal protein L18 OS=Bombyx mori GN=RpL18 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.317e-33 Identity = 72/109 (66.06%), Postives = 86/109 (78.90%), Query Frame = -3 Query: 399 KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRFKGRKFERARGKRNS 725 +E IAVVVGTVT+D+R+Y++P + V AL TE ARARI AGGE LTFDQLALRAP G+ TVL++G +NAREAV+HFGPAPG P SHTKPYVR KG E+AR R + Sbjct: 75 REGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EKARPSRRA 181
BLAST of CV713169 vs. ExPASy Swiss-Prot
Match: RL18_PLUXY (60S ribosomal protein L18 OS=Plutella xylostella GN=RpL18 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.831e-33 Identity = 72/109 (66.06%), Postives = 85/109 (77.98%), Query Frame = -3 Query: 399 KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRFKGRKFERARGKRNS 725 +E IAVVVGT+T+D R+Y+VP + V AL TE ARARI AGGE LTFDQLALRAP G+ TVL++G +NAREAV+HFGPAPG P SHTKPYVR KG E+A+ R S Sbjct: 75 REGLIAVVVGTITNDTRLYKVPKMTVAALHVTEKARARILDAGGEILTFDQLALRAPTGRKTVLIQGQRNAREAVRHFGPAPGAPRSHTKPYVRSKGH--EQAKPSRRS 181
BLAST of CV713169 vs. ExPASy Swiss-Prot
Match: RL18_AEDAE (60S ribosomal protein L18 OS=Aedes aegypti GN=RpL18 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.003e-33 Identity = 73/117 (62.39%), Postives = 91/117 (77.78%), Query Frame = -3 Query: 387 MKGK-EDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRFKGRKFERARGKRNSRGFR 734 ++GK E+ IAVVVGTVT+D R P + V ALR TE AR RI K GG+ TFDQLAL AP G+NTVL++G + AREA HFG APGVPHS+T+PYV+ KGRK+E+ARG+R+S GF+ Sbjct: 72 LRGKDENTIAVVVGTVTNDDRKLYCPKMNVCALRVTEKARERILKWGGKIYTFDQLALVAPTGKNTVLMQGERTAREAFTHFGRAPGVPHSNTRPYVQSKGRKYEKARGRRSSCGFK 188 The following BLAST results are available for this feature:
BLAST of CV713169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CV713169 ID=CV713169; Name=CV713169; organism=Citrus sinensis; type=EST; length=739bpback to top |