CV713169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV713169 vs. ExPASy Swiss-Prot
Match: RL18_TAEAS (60S ribosomal protein L18 OS=Taenia asiatica GN=RPL18 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.532e-32 Identity = 69/100 (69.00%), Postives = 81/100 (81.00%), Query Frame = -3 Query: 429 GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRFKGRK 728 G+E KIAVV+GTVT+DIR+ EVP L V ALR T AR RI KAGG+ +T DQLAL+APLG+ TVLL+GP+ AREA +HFGPAPGVP SHTKPYV K R+ Sbjct: 74 GREGKIAVVIGTVTNDIRMREVPKLTVCALRVTAGARTRILKAGGKVMTVDQLALKAPLGKGTVLLQGPRKAREACRHFGPAPGVPGSHTKPYVISKSRE 173
BLAST of CV713169 vs. ExPASy Swiss-Prot
Match: RL18_TRYBB (60S ribosomal protein L18 OS=Trypanosoma brucei brucei GN=RPL18-A PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.780e-30 Identity = 67/115 (58.26%), Postives = 86/115 (74.78%), Query Frame = -3 Query: 387 KGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRFKGRKFERARGKRNSRGFR 731 KGK+ IAV+VG V DD+R+ +PAL++ ALRF+++AR RI AGGECLTFDQLA+ AP G+NT+LLRG K+ RE+VKHFG A GVP SH KP+V +G+ ER R + FR Sbjct: 80 KGKKSPIAVIVGDVLDDVRMTRIPALRICALRFSKSARERITGAGGECLTFDQLAMMAPTGKNTMLLRGRKSGRESVKHFG-AAGVPGSHAKPHVSSRGK--ERQRSSKRRHAFR 191
BLAST of CV713169 vs. ExPASy Swiss-Prot
Match: RL18_TRYCR (60S ribosomal protein L18 OS=Trypanosoma cruzi GN=RPL18 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.153e-29 Identity = 68/115 (59.13%), Postives = 84/115 (73.04%), Query Frame = -3 Query: 387 KGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRFKGRKFERARGKRNSRGFR 731 KGK+ IAV+VG V DD+R+ +PAL+V ALRF+++AR RI AGGECLTFDQLA+ AP G+NT LLRG K+ RE+VKHFG A GVP SH KP+ +G+ ER R R FR Sbjct: 80 KGKKAPIAVIVGDVLDDVRMARIPALRVCALRFSKSARERITGAGGECLTFDQLAMVAPTGKNTFLLRGRKSGRESVKHFG-AAGVPGSHAKPFTSNRGK--ERQRSSARRRAFR 191
BLAST of CV713169 vs. ExPASy Swiss-Prot
Match: RL18_LEIMA (60S ribosomal protein L18 OS=Leishmania major GN=RPL18-A PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.666e-28 Identity = 65/115 (56.52%), Postives = 84/115 (73.04%), Query Frame = -3 Query: 387 KGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRFKGRKFERARGKRNSRGFR 731 K K IAVVVG V DD+R+ +PA++V ALRF+++AR I AGGECLTFDQLA+ AP G+NT LLRG K+ RE+V+HFG A GVP SH+KPY +G+ E RG+R R ++ Sbjct: 80 KSKAAPIAVVVGDVLDDVRMARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRKSGRESVRHFG-ASGVPGSHSKPYATNRGK--ETKRGRRTGRSYK 191
BLAST of CV713169 vs. ExPASy Swiss-Prot
Match: RL18_DICDI (60S ribosomal protein L18 OS=Dictyostelium discoideum GN=rpl18 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.666e-28 Identity = 63/104 (60.58%), Postives = 76/104 (73.08%), Query Frame = -3 Query: 414 KEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRFKGRKFERAR 725 K KIAV VGTV DD R+ + P L V ALRFTETAR+RI KAGG+ L+FDQ AL P G NT L++G ARE KHFG APG+P SH +PYVR +G KF+R++ Sbjct: 74 KSGKIAVCVGTVVDDERLLDCPKLTVCALRFTETARSRIVKAGGKALSFDQFALVRPRGNNTFLIKGVTKAREVYKHFGRAPGLPGSHARPYVRSEGIKFQRSK 177
BLAST of CV713169 vs. ExPASy Swiss-Prot
Match: RL18_THEPA (60S ribosomal protein L18 OS=Theileria parva GN=RPL18 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.841e-28 Identity = 71/118 (60.17%), Postives = 81/118 (68.64%), Query Frame = -3 Query: 384 MKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHF-GPAPGVPHSHTKPYVRFKGRKFERARGKRNSRGFRV 734 M+ + D AVVVGTVT+D R+ VP L V ALR TETAR RI +GGE LTFDQL R+P G LLRG AREAVKHF G P KPYVR KGRKFE+ARG+R+SR F+V Sbjct: 71 MEKRPDNTAVVVGTVTNDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGATKAREAVKHFRNEVKGNP----KPYVRSKGRKFEKARGRRHSRAFKV 184
BLAST of CV713169 vs. ExPASy Swiss-Prot
Match: RL18_THEAN (60S ribosomal protein L18 OS=Theileria annulata GN=RPL18 PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.405e-27 Identity = 68/117 (58.12%), Postives = 80/117 (68.38%), Query Frame = -3 Query: 387 MKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHF-GPAPGVPHSHTKPYVRFKGRKFERARGKRNSRGFR 734 M+ + + AVV+GTVT D R+ VP L V ALR TETAR RI +GGE LTFDQL R+P+G LLRG AREAVKHF G P KPYVR KGRKFE+ARG+R+SR F+ Sbjct: 71 MESRPNNTAVVIGTVTSDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKAREAVKHFRNEVKGNP----KPYVRSKGRKFEKARGRRHSRAFK 183
BLAST of CV713169 vs. ExPASy Swiss-Prot
Match: RL18_SALSA (60S ribosomal protein L18 OS=Salmo salar GN=rpl18 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.371e-19 Identity = 50/96 (52.08%), Postives = 67/96 (69.79%), Query Frame = -3 Query: 447 MKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYV 734 + G+E++ AVVVGTVTDD+R++E+P LKV+AL+ T R RI K + + F LAL AP Q +VLL P+NAR+ +HF AP +P HTKPYV Sbjct: 71 LPGRENRTAVVVGTVTDDVRIHEIPNLKVSALKITRRNRTRILKF-VQIMRFVGLALAAPNRQKSVLLSAPRNARDVSRHFANAPSIP--HTKPYV 163 The following BLAST results are available for this feature:
BLAST of CV713169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV713169 ID=CV713169; Name=CV713169; organism=Citrus sinensis; type=EST; length=739bpback to top |