CV713099
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV713099 vs. ExPASy Swiss-Prot
Match: RK16_FAGEA (50S ribosomal protein L16, chloroplastic OS=Fagopyrum esculentum subsp. ancestrale GN=rpl16 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.797e-59 Identity = 110/132 (83.33%), Postives = 115/132 (87.12%), Query Frame = 2 Query: 53 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXXMPIRTQFIIS 448 +PKRTRFRKQHRGRMKGISYRGN ICFGRYALQALEPAWITSRQIEAGRRAMTRN RRGGK+WVRIFPDKPVT+RP ETRMGSGKGSPEYWVAVVKPGRILYE+SGV E MPIRTQF+IS Sbjct: 3 SPKRTRFRKQHRGRMKGISYRGNRICFGRYALQALEPAWITSRQIEAGRRAMTRNARRGGKLWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEISGVPEKIARKAISIAASKMPIRTQFLIS 134
BLAST of CV713099 vs. ExPASy Swiss-Prot
Match: RK16_COFAR (50S ribosomal protein L16, chloroplastic OS=Coffea arabica GN=rpl16 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.797e-59 Identity = 110/132 (83.33%), Postives = 115/132 (87.12%), Query Frame = 2 Query: 53 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXXMPIRTQFIIS 448 +PKRTRFRKQHRGRMKGISYRGN ICFG++ALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKP+T RP ETRMGSGKGSPEYWVAVVKPGRILYEM GV E+ MPIRTQFIIS Sbjct: 3 SPKRTRFRKQHRGRMKGISYRGNRICFGKFALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPITARPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTEHIARRAISIAASKMPIRTQFIIS 134
BLAST of CV713099 vs. ExPASy Swiss-Prot
Match: RK16_CUSEX (50S ribosomal protein L16, plastid OS=Cuscuta exaltata GN=rpl16 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 5.228e-59 Identity = 108/132 (81.82%), Postives = 114/132 (86.36%), Query Frame = 2 Query: 53 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXXMPIRTQFIIS 448 +PKRTRFRKQHRG++KGISYRGNHICFGRYALQALEPAW+TSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVT+RP ETRMGSGKG PEYWVAVVKPGRILYEM GV + MPIRTQFIIS Sbjct: 3 SPKRTRFRKQHRGKLKGISYRGNHICFGRYALQALEPAWLTSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTVRPAETRMGSGKGCPEYWVAVVKPGRILYEMGGVTKKIARRAFSIAASKMPIRTQFIIS 134
BLAST of CV713099 vs. ExPASy Swiss-Prot
Match: RK16_ACOCL (50S ribosomal protein L16, chloroplastic OS=Acorus calamus GN=rpl16 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 5.228e-59 Identity = 108/133 (81.20%), Postives = 116/133 (87.22%), Query Frame = 2 Query: 53 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXXMPIRTQFIISG 451 +PKRTRFRKQHRGRMKG+SYRG+HICFGRYALQALEP+WITSRQIEAGRRAMTR RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSPEYWV+VVKPGRILYEM GV+E MPIRTQFII+G Sbjct: 3 SPKRTRFRKQHRGRMKGMSYRGSHICFGRYALQALEPSWITSRQIEAGRRAMTRYARRGGKIWVRIFPDKPVTIRPAETRMGSGKGSPEYWVSVVKPGRILYEMGGVSETVARAAIEIAASKMPIRTQFIIAG 135
BLAST of CV713099 vs. ExPASy Swiss-Prot
Match: RK16_ACOAM (50S ribosomal protein L16, chloroplastic OS=Acorus americanus GN=rpl16 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 5.228e-59 Identity = 108/133 (81.20%), Postives = 116/133 (87.22%), Query Frame = 2 Query: 53 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXXMPIRTQFIISG 451 +PKRTRFRKQHRGRMKG+SYRG+HICFGRYALQALEP+WITSRQIEAGRRAMTR RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSPEYWV+VVKPGRILYEM GV+E MPIRTQFII+G Sbjct: 3 SPKRTRFRKQHRGRMKGMSYRGSHICFGRYALQALEPSWITSRQIEAGRRAMTRYARRGGKIWVRIFPDKPVTIRPAETRMGSGKGSPEYWVSVVKPGRILYEMGGVSETVARAAIEIAASKMPIRTQFIIAG 135
BLAST of CV713099 vs. ExPASy Swiss-Prot
Match: RK16_PHAVU (50S ribosomal protein L16, chloroplastic OS=Phaseolus vulgaris GN=rpl16 PE=3 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 6.827e-59 Identity = 110/133 (82.71%), Postives = 116/133 (87.22%), Query Frame = 2 Query: 53 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXXMPIRTQFIISG 451 +P+RTRFRKQHRGRMKGIS RGN ICFGRYALQALEPAWITSRQIEAGRRAM+RNVRRGG+IWVRIFPDKPVT+RPTETRMGSGKG PEYWVAVVKPG+ILYEM GV EN MPIRTQFIISG Sbjct: 3 SPQRTRFRKQHRGRMKGISSRGNRICFGRYALQALEPAWITSRQIEAGRRAMSRNVRRGGQIWVRIFPDKPVTVRPTETRMGSGKGFPEYWVAVVKPGKILYEMGGVPENIARKAISIASSKMPIRTQFIISG 135
BLAST of CV713099 vs. ExPASy Swiss-Prot
Match: RK16_NANDO (50S ribosomal protein L16, chloroplastic OS=Nandina domestica GN=rpl16 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.827e-59 Identity = 107/133 (80.45%), Postives = 116/133 (87.22%), Query Frame = 2 Query: 53 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXXMPIRTQFIISG 451 +PKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGR++M R RRGGKIW+RIFPDKPVT+RPTETRMGSGKGSPEYWV+VVKPGRILYEM GV+E MPIRTQF+I+G Sbjct: 3 SPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRKSMARYARRGGKIWIRIFPDKPVTVRPTETRMGSGKGSPEYWVSVVKPGRILYEMGGVSEIAAREAISIAASKMPIRTQFVIAG 135
BLAST of CV713099 vs. ExPASy Swiss-Prot
Match: RK16_SOLTU (50S ribosomal protein L16, chloroplastic OS=Solanum tuberosum GN=rpl16 PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.165e-58 Identity = 111/132 (84.09%), Postives = 113/132 (85.61%), Query Frame = 2 Query: 53 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXXMPIRTQFIIS 448 +PKRTRFRKQHRGRMKGIS RGNHI FG+YALQALEPAWITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVTLRP ETRMGSGKGSPEYWVAVVKPGRILYEM GV EN MP RTQFIIS Sbjct: 3 SPKRTRFRKQHRGRMKGISSRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISLAASKMPKRTQFIIS 134
BLAST of CV713099 vs. ExPASy Swiss-Prot
Match: RK16_SOLBU (50S ribosomal protein L16, chloroplastic OS=Solanum bulbocastanum GN=rpl16 PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.521e-58 Identity = 111/132 (84.09%), Postives = 113/132 (85.61%), Query Frame = 2 Query: 53 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXXMPIRTQFIIS 448 +PKRTRFRKQHRGRMKGIS RGN I FG+YALQALEPAWITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVTLRP ETRMGSGKGSPEYWVAVVKPGRILYEM GV EN MPIRTQFIIS Sbjct: 3 SPKRTRFRKQHRGRMKGISSRGNRISFGKYALQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISLAASKMPIRTQFIIS 134
BLAST of CV713099 vs. ExPASy Swiss-Prot
Match: RK16_OLIPU (50S ribosomal protein L16, chloroplastic OS=Olimarabidopsis pumila GN=rpl16 PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.521e-58 Identity = 109/132 (82.58%), Postives = 114/132 (86.36%), Query Frame = 2 Query: 53 NPKRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEMSGVAENXXXXXXXXXXXXMPIRTQFIIS 448 +PKRTRFRKQHRGR+KGIS RGN ICFGRYALQ LEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVT+RP ETRMGSGKGSPEYWVAVVKPG+ILYEM GV EN MPI+TQFIIS Sbjct: 3 SPKRTRFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIIS 134 The following BLAST results are available for this feature:
BLAST of CV713099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV713099 ID=CV713099; Name=CV713099; organism=Citrus sinensis; type=EST; length=732bpback to top |