CV713098
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV713098 vs. ExPASy Swiss-Prot
Match: RR8_RHDSA (30S ribosomal protein S8, chloroplastic OS=Rhodomonas salina GN=rps8 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.339e-31 Identity = 65/136 (47.79%), Postives = 99/136 (72.79%), Query Frame = -1 Query: 60 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 467 M DTIAD++T +RNA++ R V++ ST +T+N+ +LL EGFI+N ++ + NK+ L+L+L+++ + P I LKRISRPGLR+Y N + +PR+L G+GI ++STSRG++TD AR + +GGE+LCYIW Sbjct: 1 MVNDTIADMLTRVRNANLARHQIVQVPSTKMTKNIADVLLEEGFIQNFEEVGDGINKQ--LLLSLKYKGKEREPV--ITALKRISRPGLRVYANRKELPRVLGGLGIAVISTSRGVLTDNKARHQGLGGEVLCYIW 132
BLAST of CV713098 vs. ExPASy Swiss-Prot
Match: RR8_WELMI (30S ribosomal protein S8, chloroplastic OS=Welwitschia mirabilis GN=rps8 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.696e-31 Identity = 68/133 (51.13%), Postives = 98/133 (73.68%), Query Frame = -1 Query: 60 DTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 458 DTIA++ITSIRNA + K VR+ +T EN+ +ILL+EGFI++ R+ +K FL+ TL++R+ ++ + LKRIS+PG +IY ++ +P++L GMGI I+STSRGIMTDR AR ++IGGEILCY+W Sbjct: 2 DTIANLITSIRNAYIVDKKIVRVTATRTNENIGRILLQEGFIKSIRE--HKDGQKSFLIFTLKYRKKKEKR----ITLKRISKPGRKIYSDFPNMPKVLGGMGIAIVSTSRGIMTDREARQKKIGGEILCYVW 128
BLAST of CV713098 vs. ExPASy Swiss-Prot
Match: RK14_CITSI (50S ribosomal protein L14, chloroplastic OS=Citrus sinensis GN=rpl14 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.269e-30 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = -3 Query: 625 EVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 825 EVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL Sbjct: 56 EVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 122
BLAST of CV713098 vs. ExPASy Swiss-Prot
Match: RR8_SPIMX (30S ribosomal protein S8, chloroplastic OS=Spirogyra maxima GN=rps8 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.822e-30 Identity = 68/135 (50.37%), Postives = 98/135 (72.59%), Query Frame = -1 Query: 63 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYI 467 M D I+++ITSIRNA +++ TV I +T T ++ KILL+EGFI+ R+ EN + L+LTL + R K + +L+RIS+PGLR+Y N++ IP++L G+GIVILSTS+GIM DR AR ++IGGEI+CY+ Sbjct: 1 MSNDIISNMITSIRNAILSKTKTVDILATTTTRSIAKILLQEGFIDGLRERQENGRR--LLLLTLHYERKNKS--KITTSLRRISKPGLRVYSNHQEIPKVLGGIGIVILSTSKGIMVDREARHKKIGGEIICYV 131
BLAST of CV713098 vs. ExPASy Swiss-Prot
Match: RR8_MESVI (30S ribosomal protein S8, chloroplastic OS=Mesostigma viride GN=rps8 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.074e-29 Identity = 64/136 (47.06%), Postives = 99/136 (72.79%), Query Frame = -1 Query: 60 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 467 M DTIAD+IT IRNA++ + V + ++N + + + LL+EGFIE+ + N E L+L+L+++ ++ PY I L+R+S+ GLR+Y +Y+ IP++L G+GI ILSTS+GI+TD+ AR+++IGGEILCYIW Sbjct: 1 MVNDTIADMITRIRNANLITQKQVAVIASNTNKGIAQCLLKEGFIESIEYNTNSSNNPE-LILSLKYQGKKRKPY--ITALQRVSKSGLRVYTSYKDIPKVLGGIGIAILSTSQGILTDKQARMQKIGGEILCYIW 133
BLAST of CV713098 vs. ExPASy Swiss-Prot
Match: RK14_LIRTU (50S ribosomal protein L14, chloroplastic OS=Liriodendron tulipifera GN=rpl14 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.074e-29 Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = -3 Query: 625 EVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 825 EVIRAVIVRTCKELRRDNGMIIRYDDNAAVVID EGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL Sbjct: 56 EVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 122
BLAST of CV713098 vs. ExPASy Swiss-Prot
Match: RS8_CYAP8 (30S ribosomal protein S8 OS=Cyanothece sp. (strain PCC 8801) GN=rpsH PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.832e-29 Identity = 66/134 (49.25%), Postives = 96/134 (71.64%), Query Frame = -1 Query: 60 DTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILN-LKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 458 DTI+D++T IRNA R T ++ +T +T ++ ++L EGFIE + E K +LVLTL+++ + +PI+N LKR+S+PGLR+Y N + +PR+L G+GI I+STS+GIMTDR AR + +GGEILCYIW Sbjct: 5 DTISDMLTRIRNACAVRHPTTQVPTTKMTRSIAQVLKEEGFIEGFEETGEGVQK--YLVLTLKYKDKNR---QPIINMLKRVSKPGLRVYSNCKDLPRVLGGIGIAIVSTSKGIMTDREARRQNVGGEILCYIW 133
BLAST of CV713098 vs. ExPASy Swiss-Prot
Match: RK14_PIPCE (50S ribosomal protein L14, chloroplastic OS=Piper cenocladum GN=rpl14 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.393e-29 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = -3 Query: 625 EVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 825 EVIRAVIVRTCKEL+RDNGMIIRYDDNAAVVID EGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL Sbjct: 56 EVIRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 122
BLAST of CV713098 vs. ExPASy Swiss-Prot
Match: RK14_ILLOL (50S ribosomal protein L14, chloroplastic OS=Illicium oligandrum GN=rpl14 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.393e-29 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = -3 Query: 625 EVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 825 EVIRAVIVRTCKEL+RDNGMIIRYDDNAAVVID EGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL Sbjct: 56 EVIRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 122
BLAST of CV713098 vs. ExPASy Swiss-Prot
Match: RK14_EUCGG (50S ribosomal protein L14, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rpl14 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.393e-29 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = -3 Query: 625 EVIRAVIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 825 EVIRAVIVRTCKEL+RDNGMIIRYDDNAAVVID EGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL Sbjct: 56 EVIRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 122 The following BLAST results are available for this feature:
BLAST of CV713098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV713098 ID=CV713098; Name=CV713098; organism=Citrus sinensis; type=EST; length=827bpback to top |