CV713088
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS14_PROCL (40S ribosomal protein S14 OS=Procambarus clarkii GN=RPS14 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 5.023e-48 Identity = 99/140 (70.71%), Postives = 112/140 (80.00%), Query Frame = -2 Query: 240 MSRRKTREPKEE-NVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 656 M+ RK + KEE V LGP V DGE VF V HI+AS+NDTF+HVTDLSGRET+VRITGG KVKADRDESSPYAAMLAAQDV+++CK LGI LHIK+RA G QSALRALAR+GMKIGRIEDVTP+P+DST Sbjct: 1 MAPRKGKVQKEEVQVQLGPQVLDGEKVFAVCHIYASYNDTFVHVTDLSGRETIVRITGGQKVKADRDESSPYAAMLAAQDVAEKCKSLGINCLHIKIRATGGNKTKTPGPGGQSALRALARAGMKIGRIEDVTPVPSDST 140
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS14_SCHPO (40S ribosomal protein S14 OS=Schizosaccharomyces pombe GN=rps14a PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.493e-47 Identity = 92/124 (74.19%), Postives = 107/124 (86.29%), Query Frame = -2 Query: 240 LGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 611 +GP +R GE VFGVAHIFASFNDTF+H+TDL+G+ET+VR+TGGMKVK DRDESSPYAAMLAAQD + +CKE+GITALHIK+RA GAQ+ALRALAR+GM+IGRIEDVTPIPTDST Sbjct: 5 VGPQIRSGELVFGVAHIFASFNDTFVHITDLTGKETIVRVTGGMKVKTDRDESSPYAAMLAAQDAAAKCKEVGITALHIKIRATGGTATKTPGPGAQAALRALARAGMRIGRIEDVTPIPTDST 128
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS14_DICDI (40S ribosomal protein S14 OS=Dictyostelium discoideum GN=rps14 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.047e-45 Identity = 96/135 (71.11%), Postives = 106/135 (78.52%), Query Frame = -2 Query: 240 KTREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 644 K E + GP+ E VFGVAHIFASFNDTF+HVTDLS +ET+VR+TGGMKVK DRDESSPYAA +AAQDV+ RCKELG+TALHIKLRA GAQSALRALARSGM+IGRIEDVTPIPTDST Sbjct: 11 KVVEALSAKIPCGPS----ELVFGVAHIFASFNDTFVHVTDLSSKETIVRVTGGMKVKTDRDESSPYAATMAAQDVALRCKELGVTALHIKLRATGGNGSKTPGPGAQSALRALARSGMRIGRIEDVTPIPTDST 141
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS14_KLULA (40S ribosomal protein S14 OS=Kluyveromyces lactis GN=RPS14 PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.506e-44 Identity = 87/119 (73.11%), Postives = 101/119 (84.87%), Query Frame = -2 Query: 240 RDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 596 +D VFGVA IFASFNDTF+HVTDLSGRET+ R+TGGMKVKADRDESSPYAAMLAAQDV+ +CKE+GITA+HIK+RA G Q+ALRALARSG++IGRIEDVTP+P+DST Sbjct: 8 KDNSQVFGVARIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCKEVGITAVHIKIRATGGTRSKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDST 126
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS14B_YEAST (40S ribosomal protein S14-B OS=Saccharomyces cerevisiae GN=RPS14B PE=1 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 2.184e-43 Identity = 85/119 (71.43%), Postives = 101/119 (84.87%), Query Frame = -2 Query: 240 RDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 596 RD VFGVA I+ASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDESSPYAAMLAAQDV+ +CKE+GITA+H+K+RA G Q+ALRALARSG++IGRIEDVTP+P+DST Sbjct: 9 RDNSQVFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCKEVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDST 127
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS14A_YEAST (40S ribosomal protein S14-A OS=Saccharomyces cerevisiae GN=RPS14A PE=1 SV=5) HSP 1 Score: 175.637 bits (444), Expect = 2.184e-43 Identity = 85/119 (71.43%), Postives = 101/119 (84.87%), Query Frame = -2 Query: 240 RDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 596 RD VFGVA I+ASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDESSPYAAMLAAQDV+ +CKE+GITA+H+K+RA G Q+ALRALARSG++IGRIEDVTP+P+DST Sbjct: 8 RDNSQVFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCKEVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDST 126
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS14_CANAL (40S ribosomal protein S14 OS=Candida albicans GN=RPS14 PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.725e-43 Identity = 87/114 (76.32%), Postives = 99/114 (86.84%), Query Frame = -2 Query: 240 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 581 VFGVA IFASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDESSPYAAMLAAQDV+ +CKE+GITA+HIKLRA G QSALRALARSG++IGRIEDVTP+P+DST Sbjct: 10 VFGVARIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCKEVGITAVHIKLRATGGTKTKTPGPGGQSALRALARSGLRIGRIEDVTPVPSDST 123
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS14_TRYBB (40S ribosomal protein S14 OS=Trypanosoma brucei brucei GN=RPS14 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.299e-43 Identity = 87/130 (66.92%), Postives = 102/130 (78.46%), Query Frame = -2 Query: 240 KEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 629 K+E G + + V+GV HI+ASFNDTF+HVTD+SGRET ++TGGMKVKADRDESSPYAAM+AAQDV RCKE GI ALH+K+RA GAQ+ALRALAR+GMKIGRIEDVTP+PTDST Sbjct: 4 KQEVKYYGSSAGKDQLVYGVVHIYASFNDTFVHVTDMSGRETFCKVTGGMKVKADRDESSPYAAMMAAQDVVARCKECGINALHVKMRATGGVGTKSPGPGAQAALRALARAGMKIGRIEDVTPVPTDST 133
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS14_TORRU (40S ribosomal protein S14 OS=Tortula ruralis GN=RPS14 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.084e-42 Identity = 91/114 (79.82%), Postives = 99/114 (86.84%), Query Frame = -2 Query: 240 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 581 VFGVAHIFASFNDTF+HVTDLSG+ET + +TGGMKVKADRDE+SPYAAMLAAQDV+QRCKELGITALHI +RA GAQS LRALARSGM+IGRIEDVTPIPTDST Sbjct: 11 VFGVAHIFASFNDTFVHVTDLSGKETSLVLTGGMKVKADRDEASPYAAMLAAQDVAQRCKELGITALHINVRATGGNKTKTPGPGAQS-LRALARSGMRIGRIEDVTPIPTDST 123
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS11_AERPE (30S ribosomal protein S11P OS=Aeropyrum pernix GN=rps11p PE=3 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 1.918e-31 Identity = 67/113 (59.29%), Postives = 87/113 (76.99%), Query Frame = -2 Query: 240 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 578 +GVAHI++SFN+T +H+TDL+G ET+ R+TGGM VKADR++ SPYAAM+AA +Q+ E GI A+HIK+RA GAQ+A+RALAR+G IGRIEDVTPIP D+T Sbjct: 10 WGVAHIYSSFNNTHVHITDLTGAETVARVTGGMVVKADREKPSPYAAMIAASRAAQKAMERGIAAIHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPIPHDTT 122 The following BLAST results are available for this feature:
BLAST of CV713088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >CV713088 ID=CV713088; Name=CV713088; organism=Citrus sinensis; type=EST; length=699bpback to top |