CV713088
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS11_THEVO (30S ribosomal protein S11P OS=Thermoplasma volcanium GN=rps11p PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.168e-26 Identity = 64/112 (57.14%), Postives = 81/112 (72.32%), Query Frame = -2 Query: 240 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 575 G+AHI+AS N+T IHVTD +G ET+ ++GGM VK DRD++SPYAAM AA VS+ KE IT L IK+RA GAQ+A+RAL+R+G+KI RIE+VTPIP D T Sbjct: 10 GIAHIYASQNNTIIHVTDPTGAETIAMVSGGMVVKNDRDQASPYAAMKAADMVSETLKEHEITDLIIKVRAPGGNKSKIPGPGAQAAIRALSRAGLKIVRIEEVTPIPHDGT 121
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS11_CENSY (30S ribosomal protein S11P OS=Cenarchaeum symbiosum GN=rps11p PE=3 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.138e-26 Identity = 60/122 (49.18%), Postives = 81/122 (66.39%), Query Frame = -2 Query: 240 PAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 605 P + G+AHI++S+N+T IH+TDL+G ET+ +GG+ V ADR ESSP+AAM AA V + + G T HI++RA GAQ+A+RALAR G +IGRI+DVTPIP D+T Sbjct: 66 PETTPADEKLGIAHIYSSYNNTIIHMTDLTGAETVSISSGGVHVNADRYESSPFAAMKAANKVIESARAKGFTGFHIRVRAVGGVGSRVPGPGAQAAIRALARGGFRIGRIDDVTPIPHDTT 187
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS11_METBU (30S ribosomal protein S11P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps11p PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.404e-26 Identity = 60/114 (52.63%), Postives = 80/114 (70.18%), Query Frame = -2 Query: 240 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 581 ++GVAHI SFN+T I VTDL+G ET+ + +GGM VKA RDESSPY AM A ++ ++ G+ +HIK+RA GAQ+A+RA AR+G++IGRIEDVTP+P D T Sbjct: 5 IWGVAHIKCSFNNTIITVTDLTGAETIAKSSGGMVVKAARDESSPYTAMQMATQLADILRDKGLEGVHIKVRAPGGNKQRSPGPGAQAAIRAFARAGVRIGRIEDVTPVPHDGT 118
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS11_NATPD (30S ribosomal protein S11P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps11p PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.218e-26 Identity = 57/113 (50.44%), Postives = 83/113 (73.45%), Query Frame = -2 Query: 240 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 578 +G+A+++ASFN+T I VTD++G ET+V+ +GG VK +RDE+SPYAAM A+ V++ K+ GI +H+++R GAQ+ +RALAR+G++IGRIEDVTPIP D T Sbjct: 7 WGIANVYASFNNTIITVTDMTGAETIVKSSGGTVVKQNRDEASPYAAMQMAEVVAEDVKDAGIDGVHVRVRGPGGNQQQNPGPGAQATIRALARAGLEIGRIEDVTPIPHDGT 119
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS11_METAC (30S ribosomal protein S11P OS=Methanosarcina acetivorans GN=rps11p PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.204e-25 Identity = 59/113 (52.21%), Postives = 80/113 (70.80%), Query Frame = -2 Query: 240 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 578 + VAHI +SFN+T I VTD++G ET+ + +GGM VKA RDESSPY AM A ++ + K+ GI +HI++RA GAQ+A+RA AR+G++IGRIEDVTP+P D T Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLKDKGINGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGT 118
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS11_CALMQ (30S ribosomal protein S11P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps11p PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.204e-25 Identity = 60/112 (53.57%), Postives = 80/112 (71.43%), Query Frame = -2 Query: 243 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDS 578 +G+A+I+AS N+T I +TDL+G ET+ R++GG VKADRD+ SPYAAM+AA +Q GI A+H+K+R GA +A+RALAR+GM IGRIEDVTPIP D+ Sbjct: 9 WGIAYIYASSNNTMIIITDLTGSETVARVSGGQVVKADRDKPSPYAAMMAAYKAAQIAMARGINAVHVKVRGPGGYGLKVPGPGAVAAIRALARAGMIIGRIEDVTPIPHDT 120
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS11_METMA (30S ribosomal protein S11P OS=Methanosarcina mazei GN=rps11p PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25 Identity = 58/113 (51.33%), Postives = 80/113 (70.80%), Query Frame = -2 Query: 240 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 578 + VAHI +SFN+T I VTD++G ET+ + +GGM VKA RDESSPY AM A ++ + ++ GI +HI++RA GAQ+A+RA AR+G++IGRIEDVTP+P D T Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLRDKGINGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGT 118
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS11_SULTO (30S ribosomal protein S11P OS=Sulfolobus tokodaii GN=rps11p PE=3 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 3.503e-25 Identity = 60/112 (53.57%), Postives = 79/112 (70.54%), Query Frame = -2 Query: 243 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDS 578 +G+A ++AS N+T I +TD++G E + R +GGM VKADR++ SPYAAMLAA + + GI+A+HIK+RA GAQ A+RALAR+G IGRIEDVTPIP DS Sbjct: 9 WGIARVYASQNNTLITITDITGAEIISRASGGMVVKADREKPSPYAAMLAANKAATEAFDKGISAIHIKVRAQGGYGSKTPGPGAQPAIRALARAGFIIGRIEDVTPIPHDS 120
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS11_METBF (30S ribosomal protein S11P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps11p PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.575e-25 Identity = 58/113 (51.33%), Postives = 80/113 (70.80%), Query Frame = -2 Query: 240 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 578 + VAHI +SFN+T I VTD++G ET+ + +GGM VKA RDESSPY AM A ++ + ++ GI +HI++RA GAQ+A+RA AR+G++IGRIEDVTP+P D T Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLRDKGIHGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGT 118
BLAST of CV713088 vs. ExPASy Swiss-Prot
Match: RS11_PICTO (30S ribosomal protein S11P OS=Picrophilus torridus GN=rps11p PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.803e-25 Identity = 63/112 (56.25%), Postives = 80/112 (71.43%), Query Frame = -2 Query: 240 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXGAQSALRALARSGMKIGRIEDVTPIPTDST 575 G+AHI+AS N+T I VTD +G ET+ + +GGM VK DRDE+SPYAAM AA VS++ +E IT L I++RA GAQSA+RAL+R+G KI RIE+VTPIP D T Sbjct: 5 GIAHIYASQNNTIILVTDPTGAETIAKSSGGMVVKNDRDEASPYAAMRAADMVSEKLREREITDLIIRVRAPGGSKSKIPGPGAQSAIRALSRAGFKILRIEEVTPIPHDGT 116 The following BLAST results are available for this feature:
BLAST of CV713088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >CV713088 ID=CV713088; Name=CV713088; organism=Citrus sinensis; type=EST; length=699bpback to top |