CV713074

Overview
NameCV713074
Unique NameCV713074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length750
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV713074 vs. ExPASy Swiss-Prot
Match: YWFH_BACSU (Bacilysin biosynthesis oxidoreductase ywfH OS=Bacillus subtilis GN=ywfH PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11
Identity = 45/122 (36.89%), Postives = 60/122 (49.18%), Query Frame = -1
Query:  283 GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKK-----------ILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 615
            GRIINI   +           S   A +I  +K ++ + A  NI VN + PGFIA+D   +  E++ KK           I   IP+ R G  EE A L  FLA +  A YITGQ ++ DGG
Sbjct:  134 GRIINIVGNLWKEPGANMFTNSMMNAALINASKNISIQLAPHNITVNCLNPGFIATDRYHQFVENVMKKNSISKQKAEEQIASGIPMKRVGSAEETAALAAFLA-SEEASYITGQQISADGG 254          
BLAST of CV713074 vs. ExPASy Swiss-Prot
Match: YTKK_BACSU (Putative oxidoreductase ytkK OS=Bacillus subtilis GN=ytkK PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11
Identity = 45/144 (31.25%), Postives = 69/144 (47.92%), Query Frame = -1
Query:  280 QWQDVIDLNLTGVFLCTQXXXXXXXXXXKGRIINIA--SVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDLEKKI-LEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGGM 702
            +W  +++ NL+ VF   +           GRII           G + ++ + AAK G+  LTKT+A E A   I  N + PG I  DM     E+   +I  EK P+GR G  E++A ++ FL     +  +TG V+   GG+
Sbjct:  104 EWYGMLEGNLSAVFHLFKAVIPIMRKQQFGRIITYGFQGAAHAPGWLHRSAFGAAKVGLASLTKTIAIEEAEFGITANMVCPGDIVGDMKEASIEEARMRIGKEKTPIGRSGTGEDIARIIAFLC-EENSDLVTGTVIEATGGL 246          
BLAST of CV713074 vs. ExPASy Swiss-Prot
Match: MOAE_KLEAE (Protein moaE OS=Klebsiella aerogenes GN=moaE PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11
Identity = 42/149 (28.19%), Postives = 69/149 (46.31%), Query Frame = -1
Query:  283 QDVIDLNLTGVFLCTQXXXXXXXXXXKGRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAKLGEDL-----------EKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 696
            ++ +D NLT  F   +           G ++ +AS+  L        Y  AK  +IGL ++VA++Y  + +  NAI PG++ + M  +    L            +++   +PL R   PEE+A   +FL  +P A  I+G  L  DGG
Sbjct:   99 REALDGNLTSAFASVRACLPSLIARR-GNVLFVASIASLAAGPQACGYVTAKHALIGLMRSVARDYGPQGVRANAICPGWVTTPMADEEMHPLMQAEGLSLTEAYQRVCRDVPLRRPASPEEIAQACQFLC-SPQAAIISGATLVADGG 245          
BLAST of CV713074 vs. ExPASy Swiss-Prot
Match: DCXR_CAEEL (Probable L-xylulose reductase OS=Caenorhabditis elegans GN=dhs-21 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11
Identity = 47/159 (29.56%), Postives = 78/159 (49.06%), Query Frame = -1
Query:  283 NAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQXXXXXXXXXXK-GRIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAKEYASRNINVNAIAPGFIASDMTAK--LGEDLEKKILEKIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTIDGG 750
            NAGI  +  + ++ +        +N+ G  L  Q            G I+NI+S   +        Y A+KA +  +T+ +A E  S+NI VN++ P  + +DM        D +KK+L+++P+ R+ + +EV   V FL L+  A   TG  L +DGG
Sbjct:   90 NAGIATNHAIGQITQQSIDRTFAVNVRGPILIAQLVARNFVDRQIKGSIVNISSQAAIRPLDNHTVYCASKAALDMVTRCLANELGSQNIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRMPIKRFAEVDEVVNAVLFL-LSDNASMTTGSTLPVDGG 247          
The following BLAST results are available for this feature:
BLAST of CV713074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
YWFH_BACSU9.533e-1136.89Bacilysin biosynthesis oxidoreductase ywfH OS=Baci... [more]
YTKK_BACSU9.533e-1131.25Putative oxidoreductase ytkK OS=Bacillus subtilis ... [more]
MOAE_KLEAE9.533e-1128.19Protein moaE OS=Klebsiella aerogenes GN=moaE PE=3 ... [more]
DCXR_CAEEL9.533e-1129.56Probable L-xylulose reductase OS=Caenorhabditis el... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002E16_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002E16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV713074 ID=CV713074; Name=CV713074; organism=Citrus sinensis; type=EST; length=750bp
TTTTTTTTTTTTTTTTTATGTATCACCCAAAAACTACATTCCATAATGCC
AATTTGAAGTACAACAAATGTTACGCGCCTCATGTTTGGTTTTTGCAACA
TGCTTAGCTTAAATTCTACCAAAACTTACCTGAATTTTTATTTCATAACA
ACACTTTGGCAACATTTCCTCATAGGATCATAAAGCAGACAAAGTTTCAA
CCCAGTCGATCTTACATATGAGAGCTACAGGTCAGAACTGAAACTAAACC
AGGCAGAATGGGTCACTGACCTACATAACCATTCCTCCGTCAATAGTAAG
CACCTGTCCAGTAATGTAACCGGCAGCGGGATTGAGGGCCAAGAATTCCA
CCAGTCCAGCAACTTCTTCAGGTTGGCCATACCTTCCTAAGGGGATTTTC
TCCAAGATCTTCTTTTCTAGGTCTTCGCCAAGCTTGGCGGTCATATCAGA
CGCGATGAATCCTGGTGCAATAGCATTGACATTAATGTTTCTGCTTGCAT
ATTCCTTTGCAACAGTTTTTGTCAGGCCAATAACACCTGCTTTTGCAGCA
CTGTAATTGGCTTGGCCAATATTTCCAACCAGACCAACAACTGATGCTAT
ATTGATTATTCTTCCCTTTTTCTTCTTCATCATGATTTTGGCTGCTGCCT
GTGTACACAGGAATACACCTGTAAGATTCAGATCGATAACGTCCTGCCAT
TGTGACTTCTTCATTCTCATGAGCAATGTATCTCTAGTGATTCCTGCATT
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