CV713073

Overview
NameCV713073
Unique NameCV713073
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: DHB4_HUMAN (Peroxisomal multifunctional enzyme type 2 OS=Homo sapiens GN=HSD17B4 PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 1.074e-15
Identity = 49/138 (35.51%), Postives = 78/138 (56.52%), Query Frame = 2
Query:  365 VAVVTGASRGIGRAVATSLGKAGCKVLVN--------YARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKGK 754
            V +VTGA  G+GRA A +  + G  V+VN          + S  A++V +EI   GG+A+     V +    E ++KTA+DA+G +D+++NNAGI RD    R+    W  +  ++L G F  T+AA + M K++ G+
Sbjct:   11 VVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGKAVANYDSVEEG---EKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSFQVTRAAWEHMKKQKYGR 145          
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: NODG_RHIS3 (Nodulation protein G OS=Rhizobium sp. (strain N33) GN=nodG PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.128e-15
Identity = 48/129 (37.21%), Postives = 73/129 (56.59%), Query Frame = 2
Query:  368 AVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKGK 754
            A+VTGAS GIG A+A  L   G  V ++  R  K  E +  E+   G +   F  ++S   +V+++ + A      VDIL+NNAGIT+D L +RM  + W  V+++NLT VF  T+     MM++  G+
Sbjct:    9 ALVTGASGGIGEAIARVLHAQGAIVGLHGTRVEK-LETLAAEL---GDRVKLFPANLSNRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDADWDTVLEVNLTAVFRLTRELTHPMMRRRHGR 133          

HSP 2 Score: 25.409 bits (54), Expect = 1.128e-15
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  750 GRIINIASVVGLVG 791
            GRIINI SVVG+ G
Sbjct:  132 GRIINITSVVGVTG 145          
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: PHAB_ACISR (Acetoacetyl-CoA reductase OS=Acinetobacter sp. (strain RA3849) GN=phaB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.466e-15
Identity = 46/134 (34.33%), Postives = 69/134 (51.49%), Query Frame = 2
Query:  356 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFG-GDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKGK 754
            E  VA+VTGA  GIG  +   L  AG K++       ++ E+   + E      + F   D++      + I+ A+ A G VD+L+NNAGITRD    +M   QW  VID NL  +F  TQ     M++++ G+
Sbjct:    3 EQKVALVTGALGGIGSEICRQLVTAGYKIIATVVPREEDREKQWLQSEGFQDSDVRFVLTDLNNHEAATAAIQEAIAAEGRVDVLVNNAGITRDATFKKMSYEQWSQVIDTNLKTLFTVTQPVFNKMLEQKSGR 136          

HSP 2 Score: 23.0978 bits (48), Expect = 1.466e-15
Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  750 GRIINIASVVGLVG 791
            GRI+NI+SV GL G
Sbjct:  135 GRIVNISSVNGLKG 148          
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: Y1385_MYCBO (Uncharacterized oxidoreductase Mb1385 OS=Mycobacterium bovis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.392e-15
Identity = 47/136 (34.56%), Postives = 80/136 (58.82%), Query Frame = 2
Query:  344 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKG 751
            A  + A  AV+TG ++G+G A+       G +V++     + EA EV  +       AL    DV++  DV+ +I+TAV+ +G +D+++NNAGITRD  +  M + Q+  VI ++L G +  T+ AA IM ++++G
Sbjct:    2 ASLLNARTAVITGGAQGLGLAIGQRFVAEGARVVLGDV--NLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRG 135          
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: Y1350_MYCTU (Uncharacterized oxidoreductase Rv1350/MT1393 OS=Mycobacterium tuberculosis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.392e-15
Identity = 47/136 (34.56%), Postives = 80/136 (58.82%), Query Frame = 2
Query:  344 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKG 751
            A  + A  AV+TG ++G+G A+       G +V++     + EA EV  +       AL    DV++  DV+ +I+TAV+ +G +D+++NNAGITRD  +  M + Q+  VI ++L G +  T+ AA IM ++++G
Sbjct:    2 ASLLNARTAVITGGAQGLGLAIGQRFVAEGARVVLGDV--NLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRG 135          
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: ACT3_STRCO (Putative ketoacyl reductase OS=Streptomyces coelicolor GN=actIII PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.392e-15
Identity = 49/144 (34.03%), Postives = 75/144 (52.08%), Query Frame = 2
Query:  356 EAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKGKNNQYSISCWSG 787
            ++ VA+VTGA+ GIG  +A  LGK G +V V  AR  +      KE+  +G +A     DV    ++E+++   V+ +G VD+L+NNAG         +    W DV++ NLTGVF  T+   K     E+G     +I+   G
Sbjct:    5 DSEVALVTGATSGIGLEIARRLGKEGLRVFV-CARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGG 147          
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: YGCW_ECOLI (Uncharacterized oxidoreductase ygcW OS=Escherichia coli (strain K12) GN=ygcW PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.124e-15
Identity = 44/136 (32.35%), Postives = 79/136 (58.09%), Query Frame = 2
Query:  350 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLV-NYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKGK 754
            +++   A+VTG + G+G+A A +L KAG  + + ++ + + E +E+   IE  G +       ++ E   + +I    + +GTVDIL+NNAGI +   ++   ++ W  +ID+NLT  F  +  AAKIM+ ++ GK
Sbjct:   15 SLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEM---IEKQGVEVDFMQVGITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGK 147          
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: FOX2_YEAST (Peroxisomal hydratase-dehydrogenase-epimerase OS=Saccharomyces cerevisiae GN=FOX2 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.124e-15
Identity = 49/138 (35.51%), Postives = 79/138 (57.25%), Query Frame = 2
Query:  365 VAVVTGASRGIGRAVATSLGKAGCKVLVN--------YARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKGK 754
            V V+TGA  G+G+  A +    G KV+VN           +SK A+ V  EI+ +GG A+     V++    E +I+TA+  +G VD+LINNAGI RD    +M + ++  V+D++LTG +  ++AA   M  ++ G+
Sbjct:   11 VVVITGAGGGLGKVYALAYASRGAKVVVNDLGGTLGGSGHNSKAADLVVDEIKKAGGIAVANYDSVNENG--EKIIETAIKEFGRVDVLINNAGILRDVSFAKMTEREFASVVDVHLTGGYKLSRAAWPYMRSQKFGR 146          

HSP 2 Score: 72.7886 bits (177), Expect = 2.475e-12
Identity = 48/131 (36.64%), Postives = 73/131 (55.73%), Query Frame = 2
Query:  365 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQ--ALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKG 751
            V VVTGA  G+G++ A    + G KV+VN     K+   V +EI    G+  A+    DV  EA +  +I+TA+  +  VDIL+NNAGI RD   ++MK  +W  V+ ++L   F  ++A   I  K++ G
Sbjct:  324 VVVVTGAGGGLGKSHAIWFARYGAKVVVN---DIKDPFSVVEEINKLYGEGTAIPDSHDVVTEAPL--IIQTAISKFQRVDILVNNAGILRDKSFLKMKDEEWFAVLKVHLFSTFSLSKAVWPIFTKQKSG 449          
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: FABG_CHLPN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia pneumoniae GN=fabG PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.124e-15
Identity = 44/127 (34.65%), Postives = 67/127 (52.76%), Query Frame = 2
Query:  371 VVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKG 751
            +VTG SRGIG  +     + G  V + +  + +  + V + +   GG+      DVS    V+  ++  +D    +DIL+NNAGITRD LLMRM +  WQ VI  NLT ++    +  + M+K   G
Sbjct:   11 IVTGGSRGIGLGIVKLFLENGADVEI-WGLNEERGQAVIESLTGLGGEVSFARVDVSHNGGVKDCVQKFLDKHNKIDILVNNAGITRDNLLMRMSEDDWQSVISTNLTSLYYTCSSVIRHMIKARSG 136          
BLAST of CV713073 vs. ExPASy Swiss-Prot
Match: DHBA_BACSU (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS=Bacillus subtilis GN=dhbA PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 3.124e-15
Identity = 44/137 (32.12%), Postives = 75/137 (54.74%), Query Frame = 2
Query:  344 AQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVL-VNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILINNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKEKG 751
            A+ +E  +A +TGA++GIG AVA +L   G  +  V+Y  + ++ E+V   ++A G  A  F  DV   A ++ +        G +DIL+N AG+ R  L+  +   +W+    +N TGVF  +++ +K MM +  G
Sbjct:    3 AKGIEGKIAFITGAAQGIGEAVARTLASQGAHIAAVDY--NPEKLEKVVSSLKAEGRHAEAFPADVRDSAAIDEITARIEREMGPIDILVNVAGVLRPGLIHSLSDEEWEATFSVNSTGVFNASRSVSKYMMDRRSG 137          
The following BLAST results are available for this feature:
BLAST of CV713073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
DHB4_HUMAN1.074e-1535.51Peroxisomal multifunctional enzyme type 2 OS=Homo ... [more]
NODG_RHIS31.128e-1537.21Nodulation protein G OS=Rhizobium sp. (strain N33)... [more]
PHAB_ACISR1.466e-1534.33Acetoacetyl-CoA reductase OS=Acinetobacter sp. (st... [more]
Y1385_MYCBO2.392e-1534.56Uncharacterized oxidoreductase Mb1385 OS=Mycobacte... [more]
Y1350_MYCTU2.392e-1534.56Uncharacterized oxidoreductase Rv1350/MT1393 OS=My... [more]
ACT3_STRCO2.392e-1534.03Putative ketoacyl reductase OS=Streptomyces coelic... [more]
YGCW_ECOLI3.124e-1532.35Uncharacterized oxidoreductase ygcW OS=Escherichia... [more]
FOX2_YEAST3.124e-1535.51Peroxisomal hydratase-dehydrogenase-epimerase OS=S... [more]
FABG_CHLPN3.124e-1534.653-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
DHBA_BACSU3.124e-1532.122,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002E16_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002E16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV713073 ID=CV713073; Name=CV713073; organism=Citrus sinensis; type=EST; length=793bp
TTTTGGTTGGCTTGTATAAAAAGGGAGCGAGCAAGGAAGCGTCTCTCGAA
GCCATTACCACAAAACTTCATTTCTGGCTACCCTCTTGTCTTGGATTATT
TCGTTTCGCGGAAAACCTCTCATGGCTGCCGTCGCCGGATCCAACATTGT
CGCGTTCAAATCGGCGGCTACTTCCGCGAAATTCGGTGACCGAAAAATCC
CGCAGTTTCGTCAATGGTCTCCTGTTCAGGTTAAGGCTCTGCCTCGCCCT
TCCGTTGAGCTCAAGAGTAGATGGAACAGCTCCTTCCCTTCTTCTGGAAT
CAGAGCTCAGGTTGCCACCATAGAACAAGCAACCAATGAAGCAGCACAAA
ATGTGGAAGCTCCTGTGGCTGTGGTGACTGGTGCCTCTAGGGGTATTGGC
AGAGCAGTAGCGACGTCCTTGGGAAAAGCAGGTTGCAAGGTCCTGGTAAA
TTATGCTAGGTCATCAAAGGAAGCCGAAGAAGTTTGCAAAGAGATTGAGG
CATCTGGCGGTCAGGCTCTTACTTTTGGTGGAGATGTTTCCAAAGAAGCT
GATGTGGAATCAATGATCAAAACTGCTGTCGATGCTTGGGGAACTGTTGA
TATATTGATTAACAATGCAGGAATCACTAGAGATACATTGCTCATGAGAA
TGAAGAAGTCACAATGGCAGGACGTTATCGATCTGAATCTTACAGGTGTA
TTCCTGTGTACACAGGCAGCAGCCAAAATCATGATGAAGAAAGAAAAAGG
GAAGAATAATCAATATAGCATCAGTTGTTGGTCTGGTTGGAAA
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