CV713070
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV713070 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.952e-25 Identity = 75/233 (32.19%), Postives = 115/233 (49.36%), Query Frame = 2 Query: 11 TEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKLLERFSYINSVVYPWTSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGASSHFFALFQGLLKVLAGVSTNFTVT--SKGADDGEFSE------LYLFKWTSLLIPPTTLFIIN 685 T WG+EVGW+YGS+TED+LTG ++H GWRS + F G AP L Q+ RWA G +EI +SR+ PI L+ + +Y++S V+P + + Y L +CLL+ + +P+ S + + LFI+ +E G W N + I AS+ A +LK L T F VT K DG+ + + F +++ IP T L +++ Sbjct: 443 TCWGQEVGWVYGSLTEDVLTGQRIHAAGWRSTLMEIEPPAFMGCAPNGGPACLTQLKRWASGFLEILISRNNPILTTTFKSLQFRQCLAYLHSYVWPVRAPFELCYALLGPYCLLSNQSFLPKTSEDGFYIALALFIAYNTYMFMEFIECGQSARACWNNHRMQRITSASAWLLAFLTVILKTLGFSETVFEVTRKDKSTSDGDSNTDEPEPGRFTFDESTVFIPVTALAMLS 675
BLAST of CV713070 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.689e-25 Identity = 61/203 (30.05%), Postives = 99/203 (48.77%), Query Frame = 2 Query: 2 EDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKLLERFSYINSVVYPWTSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWG----GVGIDDWWRNEQFWVIGGASSHFFALFQGLLKVLAGVSTNFTVTSK 598 E +T WGK +GW+Y S ED T +H GW S Y PK F G+ P + + Q RWA G +E+ ++ P+ + ++ + +Y+ + SIP ++YC LPA+CLL + P+ V++G+ +++ L W G + W+ ++ FW I S F++ +LK+L T F VT K Sbjct: 442 EYQTSWGKTIGWLYESTAEDANTSIGIHSRGWTSSYISPKPPAFLGAMPPGGPEAMLQQRRWATGLLEVLFNKQSPLIGMFCRKIRFRQSLAYLYIFTWGLRSIPELIYCLLPAYCLLHNAALFPK------GVYLGIVVTLVGMHCLYSLWEFMSLGFSVQSWFASQSFWRIKTTCSWLFSIPDIILKLLGISKTVFIVTKK 638
BLAST of CV713070 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.071e-23 Identity = 63/203 (31.03%), Postives = 96/203 (47.29%), Query Frame = 2 Query: 2 EDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKLLERFSYINSVVYPWTSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWG----GVGIDDWWRNEQFWVIGGASSHFFALFQGLLKVLAGVSTNFTVTSK 598 E +T WGK +GW+Y S TED+ T +H GW S Y P F G P + + Q RWA G +EI ++ P+ + ++ + +Y+ + SIP + YC LPA+CLL + P+ V++G+ I++ L W G I W+ + F I S F++ +LK+L T F VT K Sbjct: 442 EYQTSWGKNIGWLYDSTTEDVNTSIGIHSRGWTSSYIFPDPPAFLGCMPQGGPEVMVQQRRWATGLLEILFNKQSPLIGMFCRKIRFRQSLAYLYVFSWGLRSIPELFYCLLPAYCLLHNSALFPK------GVYLGIIITLVGIHCLYTLWEFMNLGFSIQSWYVTQSFGRIKTTCSWLFSVLDVILKLLGISKTVFIVTKK 638
BLAST of CV713070 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 9.069e-23 Identity = 75/251 (29.88%), Postives = 115/251 (45.82%), Query Frame = 2 Query: 2 EDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKLLERFSYINSVVYPWTSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWG----GVGIDDWWRNEQFWVIGGASSHFFALFQGLLKVLAGVSTNFTVT-----------------SKGADDGEFSELYLFKWTSL--LIPPTTLFIIN 685 E +T WG +GW+Y SV ED T +H GW S + P F GS P + + Q RWA GS+E+ ++ P+ G+ +K +R +Y V+ SIP +VYC LPA+CLL + P+ +G+ +++ L W G + W+ ++ W I SS F++ +LK+L F V S+G DDG EL F++ S IP T + ++N Sbjct: 442 EYQTSWGN-LGWLYDSVAEDTNTSIGIHLRGWTSSFISPDPPAFLGSTPSVGPEAIVQHRRWATGSIEVLFNKQSPL-IGFRRKIKFRQRLAYF-WVLMCIRSIPELVYCLLPAYCLLNNSALFPKGP------CLGIIVTLVGMHCLYTLWQFMILGFSVKSWYVSQSLWRIIATSSWLFSIQDIILKLLGISKIGFIVAKKNMPETRSGYESKSKPSQGEDDGLKLELGKFEFDSSCHFIPGTFIMLVN 683
BLAST of CV713070 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 7.677e-22 Identity = 70/246 (28.46%), Postives = 115/246 (46.75%), Query Frame = 2 Query: 2 EDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKLLERFSYINSVVYPWTSIPLIVYCTLPAFCLLTGKFIVPEISNYASLV-FIGLFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGASSHFFALFQGLLKVLAGVSTNFTVT---------------SKGADDGEFSELYLFKWTS--LLIPPTTLFIIN 685 E +T WG +GW+Y SV EDI T +H GW S + P F GS P + + Q RWA G++E+ ++ P + G +K +R +Y +++ SIP ++YC LPA+CLL + P+ ++V +G+ + + + G + W+ + W I SS F++ +LK+L F + S+G DD L F++ S L IP T + ++N Sbjct: 442 EYQTSWGN-LGWMYDSVAEDINTSVGIHLRGWTSSFISPDPPAFIGSTPTLGLEAIVQQRRWATGAIEVLFNKQSPFMGMFHGKIKFRQRLAYFWALMC-LRSIPELIYCLLPAYCLLHDSALFPKGPCLCTIVTLVGMHCLYSLWQFMSL---GFSVQSWYVVQSLWRIIATSSWLFSIQDIILKLLGISQIGFVIAKKTIPETKSVYESKPSQGEDDVPKLNLGKFEFDSSGLFIPGTFIMLVN 682 The following BLAST results are available for this feature:
BLAST of CV713070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CV713070 ID=CV713070; Name=CV713070; organism=Citrus sinensis; type=EST; length=794bpback to top |