CV713068

Overview
NameCV713068
Unique NameCV713068
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV713068 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.042e-44
Identity = 95/226 (42.04%), Postives = 138/226 (61.06%), Query Frame = 2
Query:    5 IGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGNLENFI---QQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKE 673
            IG GGFG+ YK E+S G L+A+K+L+    QG ++F  EI  +  L+HPNLV L G      ++ L+Y YL    L   +    + S   +DW    KI L IA+ L +LH++   +++HRD+K SN+LLD D NA +SDFGLA+L     TH +T +AGT GY+APEYAM   +++KADVYS+GVV LE++S K   + +F    +   ++ W  +L  +G   E
Sbjct:  684 IGEGGFGSVYKGELSEGKLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKS--NTNFRPTEDFVYLLDWAYVLQERGSLLE 907          
BLAST of CV713068 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.042e-44
Identity = 93/216 (43.06%), Postives = 134/216 (62.04%), Query Frame = 2
Query:    5 IGNGGFGATYKAEISPGVLVAIKRLAVGRF--QGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGNLENFIQQRSTRAVD---WRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAW 637
            +G+GGFG  YK E+  G  +A+KR+  G    +G  +F +EI  L ++RH +LVTL+GY     E  L+Y Y+P G L   + + S   +    W+    +ALD+AR + YLH       +HRD+KPSNILL DD  A ++DFGL RL    +    T +AGTFGY+APEYA+T RV+ K DVYS+GV+L+EL++ +K+LD S        ++V+W
Sbjct:  594 LGSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLDESQPE--ESIHLVSW 807          
BLAST of CV713068 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.666e-44
Identity = 91/225 (40.44%), Postives = 135/225 (60.00%), Query Frame = 2
Query:    5 IGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGNLENFIQQR--STRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKE 673
            +G GGFG  YK  +  G +VA+KRL    + G  QF  E++ +G   H NL+ L G+  +  E  L+Y Y+P G++ + ++       ++DW     IAL  AR L YLH+QC P+++HRDVK +NILLD+ F A + DFGLA+LL   ++H TT V GT G++APEY  T + S+K DV+ +GV++LEL++  K +D        G  I++W   L  + R  E
Sbjct:  306 LGQGGFGMVYKGYLPNGTVVAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGM-ILSWVRTLKAEKRFAE 529          
BLAST of CV713068 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 5.940e-44
Identity = 91/196 (46.43%), Postives = 123/196 (62.76%), Query Frame = 2
Query:    5 IGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALD 592
            +G GGFG  YK  ++ G +VA+K L+VG  QG  QF AEI  +  + H NLV L G         L+Y YLP G+L+  +    T  +DW   ++I L +AR L YLH++   R++HRDVK SNILLD      +SDFGLA+L    +TH +T VAGT GY+APEYAM   +++K DVY++GVV LEL+S +   D
Sbjct:  700 LGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSD 895          
BLAST of CV713068 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.758e-44
Identity = 92/223 (41.26%), Postives = 142/223 (63.68%), Query Frame = 2
Query:    5 IGNGGFGATYKAEISPGVLVAIKRL---------AVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGNLENFIQ---QRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAW 637
            +G G  G  YKAE+  G ++A+K+L            R  GV    AE+  LG +RH N+V L+G   +     L+Y Y+P G+L++ +    +  T A +W  L++IA+ +A+ + YLH  C P ++HRD+KPSNILLD DF A ++DFG+A+L+   E+ +   VAG++GY+APEYA T +V  K+D+YSYGV+LLE+++ K++++P F   G G +IV W
Sbjct:  725 LGMGSTGTVYKAEMPNGEIIAVKKLWGKNKENGKIRRRKSGVL---AEVDVLGNVRHRNIVRLLGCCTNRDCTMLLYEYMPNGSLDDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDESMSV--VAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVEPEF---GEGNSIVDW 939          
BLAST of CV713068 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.758e-44
Identity = 98/232 (42.24%), Postives = 143/232 (61.64%), Query Frame = 2
Query:    5 IGNGGFGATYKAEIS----------PGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPS--ETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGR 664
            +G GGFG  +K  I            G++VA+K+L    +QG +++  E+  LG+L HPNLV L+GY        L+Y ++P G+LEN + +R  + + W +  K+A+  A+ L +LHD    +V++RD K +NILLD +FN+ LSDFGLA+  GP+  +TH +T V GT GY APEY  T R++ K+DVYS+GVVLLELLS ++A+D   S  G   ++V W    L   R
Sbjct:   89 LGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAIGAAKGLTFLHD-AKSQVIYRDFKAANILLDAEFNSKLSDFGLAK-AGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDK--SKVGMEQSLVDWATPYLGDKR 316          
BLAST of CV713068 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.013e-43
Identity = 88/230 (38.26%), Postives = 143/230 (62.17%), Query Frame = 2
Query:    5 IGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQ---------FHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGNLENFIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSET-HATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGR 664
            IG G  G  Y+A++  G ++A+K+L      G            F AE+KTLG +RH N+V  +G   +     L+Y+Y+P G+L + + +R   ++DW + ++I L  A+ LAYLH  C+P ++HRD+K +NIL+  DF  Y++DFGLA+L+   +    +  VAG++GY+APEY  + ++++K+DVYSYGVV+LE+L+ K+ +DP+      G ++V W    +RQ R
Sbjct:  792 IGKGCSGVVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSSLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVP---EGIHLVDW----VRQNR 1014          
BLAST of CV713068 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.728e-43
Identity = 93/225 (41.33%), Postives = 137/225 (60.89%), Query Frame = 2
Query:    5 IGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGNLEN--FIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKE 673
            IG GGFG  YK  ++ G+ +A+K+L+    QG ++F  EI  +  L+HPNLV L G      E+ L+Y YL   +L    F  ++    +DW   +KI + IA+ LAYLH++   +++HRD+K +N+LLD   NA +SDFGLA+L     TH +T +AGT GY+APEYAM   ++DKADVYS+GVV LE++S K   + ++        ++ W  +L  QG   E
Sbjct:  675 IGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKS--NTNYRPKEEFVYLLDWAYVLQEQGSLLE 897          
BLAST of CV713068 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 92/225 (40.89%), Postives = 137/225 (60.89%), Query Frame = 2
Query:    5 IGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGNLEN--FIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLRQGRAKE 673
            IG GGFG  YK  ++ G+ +A+K+L+    QG ++F  EI  +  L+HPNLV L G      E+ L+Y YL   +L    F  ++    +DW   +K+ + IA+ LAYLH++   +++HRD+K +N+LLD   NA +SDFGLA+L     TH +T +AGT GY+APEYAM   ++DKADVYS+GVV LE++S K   + ++        ++ W  +L  QG   E
Sbjct:  673 IGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKS--NTNYRPKEEFIYLLDWAYVLQEQGSLLE 895          
BLAST of CV713068 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 88/213 (41.31%), Postives = 131/213 (61.50%), Query Frame = 2
Query:    5 IGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGNLEN--FIQQRSTRAVDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGPSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAW 637
            IG GGFG  YK ++  G ++A+K+L+ G  QG ++F  EI  +  L HPNLV L G      ++ L+Y ++   +L    F  Q +   +DW    KI + +AR LAYLH++   +++HRD+K +N+LLD   N  +SDFGLA+L     TH +T +AGTFGY+APEYAM   ++DKADVYS+G+V LE++  +   +    S  N F ++ W
Sbjct:  630 IGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRS--NKIERSKNNTFYLIDW 840          
The following BLAST results are available for this feature:
BLAST of CV713068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1765_ARATH2.042e-4442.04Probable LRR receptor-like serine/threonine-protei... [more]
TMK1_ARATH2.042e-4443.06Probable receptor protein kinase TMK1 OS=Arabidops... [more]
Y5457_ARATH2.666e-4440.44Probable LRR receptor-like serine/threonine-protei... [more]
Y1561_ARATH5.940e-4446.43Probable LRR receptor-like serine/threonine-protei... [more]
Y5148_ARATH7.758e-4441.26Probable leucine-rich repeat receptor-like protein... [more]
APK2B_ARATH7.758e-4442.24Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
RCH2_ARATH1.013e-4338.26Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
Y5343_ARATH1.728e-4341.33Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH2.948e-4340.89Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH2.948e-4341.31Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002E12_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV713068 ID=CV713068; Name=CV713068; organism=Citrus sinensis; type=EST; length=709bp
CTGCATTGGAAATGGAGGGTTTGGGGCCACTTACAAGGCAGAGATATCGC
CTGGAGTCTTGGTGGCAATAAAACGGCTTGCTGTTGGACGGTTTCAAGGG
GTCCAACAATTTCATGCTGAGATCAAAACTCTTGGAAGGCTCCGCCATCC
AAATCTGGTAACTCTAATTGGTTATCATGCCAGTGAAACAGAGATGTTCC
TTATATACAATTACTTGCCTGGGGGTAATTTGGAGAACTTCATCCAGCAA
AGATCCACAAGGGCTGTGGATTGGAGGGTACTCCACAAGATTGCTCTGGA
TATAGCTCGTGCCCTTGCTTACCTCCATGATCAGTGTGTACCACGCGTTC
TCCATCGTGATGTGAAGCCTAGCAATATCCTGTTGGATGATGATTTCAAT
GCATATCTATCTGACTTTGGCTTGGCCCGGCTTCTGGGTCCTTCAGAAAC
CCATGCCACTACGGGAGTGGCTGGGACATTTGGTTATGTTGCTCCAGAAT
ATGCAATGACTTGCCGCGTTTCTGACAAAGCAGATGTCTACAGTTATGGG
GTCGTGCTTCTTGAGCTACTTTCAGATAAGAAAGCTCTGGATCCCTCATT
TTCTTCATATGGGAATGGATTCAACATTGTTGCATGGGGATGTATGCTCC
TTCGTCAAGGTCGGGCCAAGGAATTCTTCACGGCAGGGTTGTGGGATGCA
GGCCCTCAT
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