CV713042

Overview
NameCV713042
Unique NameCV713042
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV713042 vs. ExPASy Swiss-Prot
Match: KPYK1_SYNY3 (Pyruvate kinase 1 OS=Synechocystis sp. (strain PCC 6803) GN=pyk1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.509e-11
Identity = 54/198 (27.27%), Postives = 97/198 (48.99%), Query Frame = 3
Query:  159 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLS 752
            TKIV T+GP S SV+VI   + AGM+VAR +FS G+ E H   +  L++  +       ++ D  GP++++         L+    V L P    +     + I++  LA   K G+ I +   L          ++V  ++  +V C +  T  +  S   ++   + + LP+++ KDK+ +  +G+   ID++SLS
Sbjct:   18 TKIVATIGPASSSVEVIRQMVDAGMNVARLNFSHGSYEDHATMVRLLRSVEQEMDTPITLLQDLQGPKIRIGQLPGGEKQLREGEKVSLVPVEIGDRHPGAVGIDYPHLATEAKVGERILLDDGLLE--------MKVVSIQDPEVICEVV-TGGILKSRKGVNLPGLVLTLPSMTTKDKQDL-EFGLSQGIDWVSLS 205          
BLAST of CV713042 vs. ExPASy Swiss-Prot
Match: KPYK_MYCTU (Pyruvate kinase OS=Mycobacterium tuberculosis GN=pyk PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11
Identity = 50/197 (25.38%), Postives = 95/197 (48.22%), Query Frame = 3
Query:  162 KIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLS 752
            KIV TLGP ++  D++   ++AGM VAR +FS G+ + H+   E ++ A   T +   V+ D  GP+++ + +     +  A+G  V       E +   +   +  LA+    GD + +        +   V L V  V+G+DV C +     ++ +   +    + +  P LS+KD E + ++ +   +D ++LS
Sbjct:    6 KIVCTLGPATQRDDLVRALVEAGMDVARMNFSHGDYDDHKVAYERVRVASDATGRAVGVLADLQGPKIR-LGRFASGATHWAEGETVRITVGACEGSHDRVSTTYKRLAQDAVAGDRVLV--------DDGKVALVVDAVEGDDVVCTVVEGGPVSDNK-GISLPGMNVTAPALSEKDIEDL-TFALNLGVDMVALS 191          
BLAST of CV713042 vs. ExPASy Swiss-Prot
Match: KPYK1_CANGA (Pyruvate kinase 1 OS=Candida glabrata GN=PYK1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11
Identity = 48/202 (23.76%), Postives = 99/202 (49.01%), Query Frame = 3
Query:  159 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT-TKKLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPD--CGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLS 752
            T I+GT+GPK+ + + +    KAG+++ R +FS G+ EYH+  ++N + + +    +  A+ LDT GPE++     +E    +  +  ++ T D    +    +++ +++  + K +  G  I++   + +         EV +V  +    V    A    S   ++     ++LP LS+KDK  +  +GV+N +  +  S
Sbjct:   22 TSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPLAIALDTKGPEIRTGTTTNEVDYPIPPNHEMIFTTDDKYAKACDDKIMYLDYKNITKVISAGRIIYVDDGVLS--------FEVLQVVDDKTLKVKSLNAGKICSHKGVNLPGTDVDLPALSEKDKADL-RFGVENGVHMIFAS 214          
BLAST of CV713042 vs. ExPASy Swiss-Prot
Match: KPYK_KLULA (Pyruvate kinase OS=Kluyveromyces lactis GN=PYK1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 49/202 (24.26%), Postives = 100/202 (49.50%), Query Frame = 3
Query:  159 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTK-KLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPD--CGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLS 752
            T I+ T+GPK+ + + +    KAGM++ R +FS G+ EYHQ  ++N + + +  + +  A+ LDT GPE++     ++    +  +  ++ T D    +    + + +++  + K ++ G  I++   + +         EV EV  ++   V    A    S   ++     ++LP LS+KDK  +  +GV+N +  +  S
Sbjct:   22 TSIICTIGPKTNNPETLVELRKAGMNIVRMNFSHGSYEYHQSVIDNARKSEELYQGRPLAIALDTKGPEIRTGTTTNDVDYPIPPNHEMIFTTDDKYAKACDDKTMYVDYKNITKVIEAGRIIYVDDGVLS--------FEVLEVIDDNTLKVKSLNAGKICSHKGVNLPGTDVDLPALSEKDKSDL-KFGVKNGVHMVFAS 214          
The following BLAST results are available for this feature:
BLAST of CV713042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
KPYK1_SYNY32.509e-1127.27Pyruvate kinase 1 OS=Synechocystis sp. (strain PCC... [more]
KPYK_MYCTU4.279e-1125.38Pyruvate kinase OS=Mycobacterium tuberculosis GN=p... [more]
KPYK1_CANGA4.279e-1123.76Pyruvate kinase 1 OS=Candida glabrata GN=PYK1 PE=3... [more]
KPYK_KLULA7.299e-1124.26Pyruvate kinase OS=Kluyveromyces lactis GN=PYK1 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002D21_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002D21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV713042 ID=CV713042; Name=CV713042; organism=Citrus sinensis; type=EST; length=753bp
TCGGCACGGGCTGCCTCTTTCATCTCTCGTACTCTCTCTGTATCTCTCTG
TATCTCTCTGTTCAGTGAAAGATGCATTCAAGTCACTTGCTTCTCGAGGA
GCCAATCAGGATGGCTTCAATCCTGGAGCCATCCAAAGCCAGTTTCTTCC
CGGCAATGACCAAAATTGTCGGAACGCTTGGTCCTAAATCTCGATCTGTT
GATGTTATATCCGGTTGCCTCAAAGCTGGAATGTCTGTGGCTAGATTCGA
TTTCTCGTGGGGTAATACTGAATACCACCAAGAGACCTTGGAGAATCTCA
AGGCGGCAGTTAAGACTACTAAGAAGCTTTGTGCTGTTATGTTGGACACA
GTGGGTCCCGAATTGCAGGTTGTTAATAAGAGTGAGAAGGCAATTTCACT
TAAGGCAGATGGTTCTGTTGTTCTCACACCTGACTGTGGACAAGAAGCCA
CTTCTCAAGTTTTGCCCATCAATTTCGATGGACTTGCTAAGTCAGTGAAG
AAAGGAGACACCATTTTTATCGGTCAATACTTGTTCACTGGAAGTGAGAC
TACTTCTGTGTGGCTGGAGGTTTCTGAAGTGAAAGGAAATGATGTAACTT
GTGTGATAAAGAATACTGCAACGTTGGCTGGTTCACTTTTCACTTTACAT
GCCTCTCAAATTCGTATTGAACTGCCAACTCTTTCTGATAAAGATAAGGA
GGTCATTAGTTCTTGGGGAGTTCAAAACAAAATTGACTTCCTCTCATTGT
CCT
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