CV713041

Overview
NameCV713041
Unique NameCV713041
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV713041 vs. ExPASy Swiss-Prot
Match: KPYK_BORBU (Pyruvate kinase OS=Borrelia burgdorferi GN=pyk PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13
Identity = 41/123 (33.33%), Postives = 70/123 (56.91%), Query Frame = -1
Query:  487 SMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEK-----VFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPV 840
            +M +N RPTRAE +D+ANA+L+G+DAI+L  ET  G YP+E + ++  I  + EK     ++  +L++ K++            I   A+ A   +    II  +  G+ AR++A YR ++P+
Sbjct:  277 TMIENPRPTRAEVSDIANAILNGTDAIMLSGETAYGKYPIEAVKMMTSIAKKVEKHRKMTLYKDELFYDKSIT--------RNYIIKCAIDATKLMDIKAIIVDSLKGKTARIMATYRASVPL 391          
BLAST of CV713041 vs. ExPASy Swiss-Prot
Match: KPYK_METJA (Pyruvate kinase OS=Methanocaldococcus jannaschii GN=MJ0108 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.533e-13
Identity = 51/141 (36.17%), Postives = 77/141 (54.61%), Query Frame = -1
Query:  442 VDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAI----KVKASVIICFTSSGRAARLIAKYRPTMPVLSVV--IPRLKTNQLKW 846
            +DSM +N  PTRAE TD+ANA+ DG+D ++L  ET  G YP+E I ++ K+   A++ + +   F   V C+      +ESI    V A      K+   ++I  T SGR A+LI+K R    +++    I  LK  +L W
Sbjct:  262 LDSMINNPFPTRAEVTDIANAIYDGTDCLMLSNETTIGKYPIEAIKVLNKVAKVADEHYEE---FGDRV-CL-----EVESIDEGLVYAVYELYKKLNTKLVITPTYSGRTAKLISKLRINSKIIAPTPNIRTLKRLRLVW 393          
BLAST of CV713041 vs. ExPASy Swiss-Prot
Match: KPYK_MYCIT (Pyruvate kinase OS=Mycobacterium intracellulare GN=pyk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.227e-13
Identity = 44/127 (34.65%), Postives = 67/127 (52.76%), Query Frame = -1
Query:  481 VDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHL----ESIASSAVR-AAIKVKASVIICFTSSGRAARLIAKYRPTMPVLS 846
            +DSM +N RPTRAEA+DVANAVLDG+DA++L  ET  G YP+  +  + +I    E                  P+TH+      + S A R    ++ A  ++ FT SG   + +A+    +P+L+
Sbjct:  279 LDSMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKYPMAAVRTMSRIICAVE-----------DNSTAAPPLTHVPRTKRGVISYAARDIGERLDAKALVAFTQSGDTVKRLARLHTPLPLLA 394          
BLAST of CV713041 vs. ExPASy Swiss-Prot
Match: KPYK_CORGL (Pyruvate kinase OS=Corynebacterium glutamicum GN=pyk PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 45/121 (37.19%), Postives = 66/121 (54.55%), Query Frame = -1
Query:  484 VDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVL 846
            +DSM +N RPTRAEA+DVANAVLDG+DA++L  ET  G  P   +  + +I   AE          +       P T    I+ SA   A ++ A  ++ FT+SG  A+ +A+    +P+L
Sbjct:  279 LDSMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKDPHNVVRTMSRIVRFAET-------DGRVPDLTHIPRTKRGVISYSARDIAERLNARALVAFTTSGDTAKRVARLHSHLPLL 392          
BLAST of CV713041 vs. ExPASy Swiss-Prot
Match: KPYK_COREF (Pyruvate kinase OS=Corynebacterium efficiens GN=pyk PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12
Identity = 45/121 (37.19%), Postives = 66/121 (54.55%), Query Frame = -1
Query:  484 VDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVL 846
            +DSM +N RPTRAEA+DVANAVLDG+DA++L  ET  G  P   +  + +I   AE          +       P T    I+ SA   A ++ A  ++ FT+SG  A+ +A+    +P+L
Sbjct:  279 LDSMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKDPHNVVRTMSRIVRFAET-------DGRVPDLTHIPRTKRGVISYSARDIAERLNARALVAFTTSGDTAKRLARLHSHLPLL 392          
BLAST of CV713041 vs. ExPASy Swiss-Prot
Match: KPYK_THEAC (Pyruvate kinase OS=Thermoplasma acidophilum GN=Ta0896 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.834e-11
Identity = 40/139 (28.78%), Postives = 70/139 (50.36%), Query Frame = -1
Query:  436 VDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKIC--AEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSF 846
            ++SM +N  PTRAE +D+ NA++D +DA++L  E+  G YPV+ +  + ++    E +  F+   YFK          T   S+A +A   +  +K+  I+  T +G   R+I+  RP   V +  +      +L   F
Sbjct:  263 LESMVNNSSPTRAEISDITNAIIDNADALMLSEESAIGKYPVQAVRTLKEVSDYVEDKVSFDSSYYFKGN--------TIAYSVARAAKILSDDIKSDGIVALTHTGSTVRMISSLRPKAMVYAATVSESLARKLNIYF 393          
BLAST of CV713041 vs. ExPASy Swiss-Prot
Match: KPYK_METEA (Pyruvate kinase OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=pyk PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.834e-11
Identity = 45/134 (33.58%), Postives = 74/134 (55.22%), Query Frame = -1
Query:  448 VDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEP-MTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQL 846
            ++SM  +  PTRAE +DVA AV +G+DA++L AE+  G +PVE I  + +I   AE+V    LY+   +    EP  T  ++IA++A +    +    I+ +T SG     +A+ RP   V+++   R    +L
Sbjct:  278 LESMITSPVPTRAEVSDVATAVYEGADAVMLSAESAAGDFPVEAIGTMNRI---AEQVERDALYWSILMAQRSEPEPTASDAIAAAAHQIVEALSLRSIMAWTHSGSTVLRLARARPNASVIALTPKRETARRL 408          
The following BLAST results are available for this feature:
BLAST of CV713041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
KPYK_BORBU2.484e-1333.33Pyruvate kinase OS=Borrelia burgdorferi GN=pyk PE=... [more]
KPYK_METJA5.533e-1336.17Pyruvate kinase OS=Methanocaldococcus jannaschii G... [more]
KPYK_MYCIT7.227e-1334.65Pyruvate kinase OS=Mycobacterium intracellulare GN... [more]
KPYK_CORGL3.587e-1237.19Pyruvate kinase OS=Corynebacterium glutamicum GN=p... [more]
KPYK_COREF4.684e-1237.19Pyruvate kinase OS=Corynebacterium efficiens GN=py... [more]
KPYK_THEAC8.834e-1128.78Pyruvate kinase OS=Thermoplasma acidophilum GN=Ta0... [more]
KPYK_METEA8.834e-1133.58Pyruvate kinase OS=Methylobacterium extorquens (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002D21_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002D21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV713041 ID=CV713041; Name=CV713041; organism=Citrus sinensis; type=EST; length=846bp
CGTGTGAATTTCATACTCAAAAAAAACTAAAATATCTTTCCCCGACTTCC
AGTCTGGGAAGTTTCATAATTACTAGTGCGCTTTAAATACAATTTGGCCA
TAATAAAAACCTGGAGATATACCTCACAGGTGCCAGCAACATGGTCCACC
ACCGTTTTCAAAAAATTAGGACAAAATAATGCCACAAAACATGGGCAGTA
CAAGCATTTTAGTCTTCGAGCTCAATAATCTTAACCACAGATGCATCGCC
GACTTTCTGGCAAACAACAACTCGATCATGCGACTTTATAACTCCTGAAG
CCTTCCCGTGATCAAGAGCAACCTTTAGAACCGACTCATTCGTGGCATTT
GTAGACTCCGCAGGATGTCGAGGATCAGCAAGCATAGGGAAGAGACCTCT
CACAATGAGTGATTGCCTTGCTCAAAGGCTCCACTAAAGCTCCATTTTAG
TTGATTTGTCTTAAGGCGTGGGATCACAACTGATAGAACCGGCATTGTTG
GCCTGTACTTGGCAATCAATCTTGCAGCTCTTCCTGATGAAGTGAAGCAT
ATAATAACAGATGCCTTCACTTTAATGGCTGCCCTTACCGCTGAAGATGC
AATAGACTCTAAGTGGGTCATTGGCTCTCCAACGCATTTGACGGTCTTCT
TGAAATAAAGGTCCTGGTTGAAAACCTTCTCTGCCTCAGCACAAATTTTA
CCAACAATAGAAATAGTTTCTACGGGGTACAATCCACGCAGAGTCTCAGC
ACCAAGAAGAATCGCATCACTTCCATCTAACACAGCATTTGCAACATCAG
TTGCTTCAGCACGAGTTGGTCTCAGGTTGTCAGTCATACTGTCCAC
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