CV713022

Overview
NameCV713022
Unique NameCV713022
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV713022 vs. ExPASy Swiss-Prot
Match: ZN529_HUMAN (Zinc finger protein 529 OS=Homo sapiens GN=ZNF529 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.341e-14
Identity = 50/138 (36.23%), Postives = 71/138 (51.45%), Query Frame = -3
Query:  209 KRATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKR---NRCPHE--GCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 607
            K   K  RN  S+       ++I  G        C  +F    EL+ H+R    + P+E   CGK F      I HQR+H  E+P +C  K C  +F+ + A TEH R+HTGE+PY+CK   CG +FR  S  ++H+R
Sbjct:  364 KACGKVFRNSSSLTR----HQRIHTGEKPYKCKECEKAFGVGSELTRHERIHSGQKPYECKECGKFFRLTSALIQHQRIHSGEKPYEC--KVCGKAFRHSSALTEHQRIHTGEKPYECK--ACGKAFRHSSSFTKHQR 493          

HSP 2 Score: 70.8626 bits (172), Expect = 1.062e-11
Identity = 39/112 (34.82%), Postives = 55/112 (49.11%), Query Frame = -3
Query:  209 HHRCDLDGCRMSFETKRELSLHKRNRCPHEG-----CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 529
            H  C    C  SF    +L+ H++     +      CGK F  H     HQR+H  E+P KC    C   F+ +    EH R+HTGE+PY CK   CG +F    +++RH+R
Sbjct:  248 HFECSF--CGKSFRVHAQLTRHQKIHTDEKTYKCMECGKDFRFHSQLTEHQRIHTGEKPYKC--MHCEKVFRISSQLIEHQRIHTGEKPYACK--ECGKAFGVCRELARHQR 353          
BLAST of CV713022 vs. ExPASy Swiss-Prot
Match: MTF1_MOUSE (Metal regulatory transcription factor 1 OS=Mus musculus GN=Mtf1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.341e-14
Identity = 39/129 (30.23%), Postives = 65/129 (50.39%), Query Frame = -3
Query:  209 SVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKRNR-------CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 574
            ++ + C + K+     ++C  +GC  ++ T   L  H++         C  EGCGK F +     IH RVH  E+P +C  +GC  +F   +    H R+HTG + + C+ +GC   F  +SD+ +H R
Sbjct:  123 TLQSECPETKRKEVKRYQCTFEGCPRTYSTAGNLRTHQKTHRGEYTFVCNQEGCGKAFLTSYSLRIHVRVHTKEKPFECDVQGCEKAFNTLYRLKAHQRLHTG-KTFNCESQGCSKYFTTLSDLRKHIR 250          

HSP 2 Score: 75.485 bits (184), Expect = 4.313e-13
Identity = 38/114 (33.33%), Postives = 53/114 (46.49%), Query Frame = -3
Query:  197 CDLDGCRMSFETKRELSLHKRNR------CPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRKTGH 520
            CD+ GC  +F T   L  H+R        C  +GC K F++      H R H  E+P +C   GC  +F  +     H+R HTGERP+ C   GC  +F     +  H +  GH
Sbjct:  201 CDVQGCEKAFNTLYRLKAHQRLHTGKTFNCESQGCSKYFTTLSDLRKHIRTHTGEKPFRCDHDGCGKAFAASHHLKTHVRTHTGERPFFCPSNGCEKTFSTQYSLKSHMK--GH 312          
BLAST of CV713022 vs. ExPASy Swiss-Prot
Match: ZN699_HUMAN (Zinc finger protein 699 OS=Homo sapiens GN=ZNF699 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.751e-14
Identity = 48/121 (39.67%), Postives = 63/121 (52.07%), Query Frame = -3
Query:  206 DKKKILKGHHRCDLDGCRMSFETKRELSLHKRNRC---PHE--GCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRK 553
            + K+I  G    +   C  +F     LS HKR      P+E   CGK FSS  + IIH R+H  E+P +C  K C  +F  +   T H R HTGE+PYKCK   CG ++   S +S H RK
Sbjct:  296 EHKRIHSGDKPYECKECGKAFSCSSSLSKHKRIHSGDKPYECKECGKAFSSSSHLIIHIRIHTGEKPYEC--KECGKAFSESSKLTVHGRTHTGEKPYKCK--ECGKAYNCPSSLSIHMRK 412          
BLAST of CV713022 vs. ExPASy Swiss-Prot
Match: ZN479_HUMAN (Zinc finger protein 479 OS=Homo sapiens GN=ZNF479 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.751e-14
Identity = 56/178 (31.46%), Postives = 80/178 (44.94%), Query Frame = -3
Query:  209 LTENKFNGSGFIRSPCEGLRPRAGKDAANTSEVDIREIAEKRATKTMRNRESVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKR---NRCPH--EGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 727
            LT +K   +G     CE       + +A T+   I         +      SV +   D K+I  G   C  + C  +F     L+ HKR      P+  E CG+ FS     + H+R+H  E+P  C  + C   F+ + A T H R+HTGERPYKC  E CG  F   S ++ H+R
Sbjct:  256 LTRHKRTHTGEKPYTCEECGQAFRRSSALTNHKRIHTGERPYKCEECGKAFSVSSTLTDHKRIHTGEKPCRCEECGKAFSWSSNLTRHKRIHTREKPYACEECGQAFSLSSNLMRHRRIHTGEKPYTC--EECGQDFRRSSALTIHKRIHTGERPYKC--EECGKVFSLSSTLTDHKR 429          

HSP 2 Score: 68.9366 bits (167), Expect = 4.037e-11
Identity = 37/108 (34.26%), Postives = 56/108 (51.85%), Query Frame = -3
Query:  266 SVPAPCQDKKKILKGHHRCDLDGCRMSFETKRELSLHKR---NRCPH--EGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCK 574
            S+ +   D K+I  G      + C  +F     L+ HKR      P+  E CGK F+     + H+R+H  E+P KC  + C  +FKW  +  +H  +HTGE+PYKC+
Sbjct:  419 SLSSTLTDHKRIHTGERPYKCEECGKAFSLSSTLTDHKRIHTGERPYTCEECGKAFNCSSTLMQHKRIHTGEKPYKC--EECEQAFKWHSSLAKHKIIHTGEKPYKCE 524          

HSP 3 Score: 68.1662 bits (165), Expect = 6.886e-11
Identity = 41/106 (38.68%), Postives = 53/106 (50.00%), Query Frame = -3
Query:  209 CRMSFETKRELSLHK-------RNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 505
            C  SF      + HK         RC  E CGK FS       H+R H  E+P  C  + C  +F+ + A T H R+HTGERPYKC  E CG +F   S ++ H+R
Sbjct:  218 CGKSFNCSSNHTTHKIIHTGEKPYRC--EECGKAFSWSANLTRHKRTHTGEKPYTC--EECGQAFRRSSALTNHKRIHTGERPYKC--EECGKAFSVSSTLTDHKR 317          
BLAST of CV713022 vs. ExPASy Swiss-Prot
Match: ZN461_HUMAN (Zinc finger protein 461 OS=Homo sapiens GN=ZNF461 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.751e-14
Identity = 45/117 (38.46%), Postives = 65/117 (55.56%), Query Frame = -3
Query:  209 KILKGHHRCDLDGCRMSFETKRELSLHKR---NRCPHE--GCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 544
            +I  G  R + + C  +F    EL+LH+R      P+E   CGK F        HQR+H  E+P +C  K C  +F   +  TEH+R+HTGE+PY+CK   CG +FR  S ++ H+R
Sbjct:  265 RIHNGEKRYECNECGKAFNYGSELTLHQRIHTGEKPYECKECGKAFRQRSQLTQHQRLHTGEKPYEC--KQCGKAFIRGFQLTEHLRLHTGEKPYECK--ECGKTFRHRSHLTIHQR 377          
BLAST of CV713022 vs. ExPASy Swiss-Prot
Match: Z354B_MOUSE (Zinc finger protein 354B OS=Mus musculus GN=Znf354b PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.287e-14
Identity = 43/97 (44.33%), Postives = 56/97 (57.73%), Query Frame = -3
Query:  209 LSLHKRNRCPHEG--------CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 475
            +S   R+R  H G        CGK  SSH   IIH+R+H  E+P KC  K C  +F+ + A  +H R+HTGERPYKC    CG +FR  S +S H+R
Sbjct:  411 ISRLNRHRIIHTGEKFYNCNECGKALSSHSTLIIHERIHTGEKPCKC--KVCGKAFRQSSALIQHQRMHTGERPYKC--NECGKTFRCNSSLSNHQR 503          

HSP 2 Score: 70.0922 bits (170), Expect = 1.812e-11
Identity = 42/118 (35.59%), Postives = 59/118 (50.00%), Query Frame = -3
Query:  209 KKILKGHHRCDLDGCRMSFETKRELSLHKRNRC---PHE--GCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 547
            ++I  G   C    C  +F     L  H+R      P++   CGK F  +     HQR H  E+P +C  + C MSF  + A  +H R+HTGE+P+KC    CG SFR  S +  H+R
Sbjct:  446 ERIHTGEKPCKCKVCGKAFRQSSALIQHQRMHTGERPYKCNECGKTFRCNSSLSNHQRTHTGEKPYRC--QECGMSFGQSAALIQHRRIHTGEKPFKC--NTCGKSFRQSSSLIAHQR 559          
BLAST of CV713022 vs. ExPASy Swiss-Prot
Match: Z354A_RAT (Zinc finger protein 354A OS=Rattus norvegicus GN=Znf354a PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.287e-14
Identity = 43/97 (44.33%), Postives = 56/97 (57.73%), Query Frame = -3
Query:  209 LSLHKRNRCPHEG--------CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 475
            +S   R+R  H G        CGK  SSH   IIH+R+H  E+P KC  K C  +F+ + A  +H R+HTGERPYKC    CG +FR  S +S H+R
Sbjct:  393 ISRLNRHRIIHTGEKLYNCNECGKALSSHSTLIIHERIHTGEKPCKC--KVCGKAFRQSSALIQHQRMHTGERPYKC--NECGKTFRCNSSLSNHQR 485          
BLAST of CV713022 vs. ExPASy Swiss-Prot
Match: Z354A_MOUSE (Zinc finger protein 354A OS=Mus musculus GN=Znf354a PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.287e-14
Identity = 43/97 (44.33%), Postives = 56/97 (57.73%), Query Frame = -3
Query:  209 LSLHKRNRCPHEG--------CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 475
            +S   R+R  H G        CGK  SSH   IIH+R+H  E+P KC  K C  +F+ + A  +H R+HTGERPYKC    CG +FR  S +S H+R
Sbjct:  389 ISRLNRHRIIHTGEKFYNCNECGKALSSHSTLIIHERIHTGEKPCKC--KVCGKAFRQSSALIQHQRMHTGERPYKC--NECGKTFRCNSSLSNHQR 481          
BLAST of CV713022 vs. ExPASy Swiss-Prot
Match: Z354A_HUMAN (Zinc finger protein 354A OS=Homo sapiens GN=ZNF354A PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.287e-14
Identity = 43/97 (44.33%), Postives = 56/97 (57.73%), Query Frame = -3
Query:  209 LSLHKRNRCPHEG--------CGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRR 475
            +S   R+R  H G        CGK  SSH   IIH+R+H  E+P KC  K C  +F+ + A  +H R+HTGERPYKC    CG +FR  S +S H+R
Sbjct:  422 ISRLNRHRIIHTGEKFYNCNECGKALSSHSTLIIHERIHTGEKPCKC--KVCGKAFRQSSALIQHQRMHTGERPYKC--NECGKTFRCNSSLSNHQR 514          
BLAST of CV713022 vs. ExPASy Swiss-Prot
Match: ZN362_HUMAN (Zinc finger protein 362 OS=Homo sapiens GN=ZNF362 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.987e-14
Identity = 40/114 (35.09%), Postives = 63/114 (55.26%), Query Frame = -3
Query:  206 HRCDLDGCRMSFETKRELSLH-------KRNRCPHEGCGKRFSSHKYAIIHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGERPYKCKFEGCGLSFRFVSDISRHRRK 526
            +RC +  C ++F TK E+ +H       K ++CPH  C K F++  Y   H R+H   +P  C +  C  SF+      +H R+HTG+RPYKC   GC  +F  +S++  H+R+
Sbjct:  227 YRCKV--CPLTFFTKSEMQIHSKSHTEAKPHKCPH--CSKSFANASYLAQHLRIHLGVKPYHCSY--CDKSFRQLSHLQQHTRIHTGDRPYKCPHPGCEKAFTQLSNLQSHQRQ 334          
The following BLAST results are available for this feature:
BLAST of CV713022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 423
Match NameE-valueIdentityDescription
ZN529_HUMAN1.341e-1436.23Zinc finger protein 529 OS=Homo sapiens GN=ZNF529 ... [more]
MTF1_MOUSE1.341e-1430.23Metal regulatory transcription factor 1 OS=Mus mus... [more]
ZN699_HUMAN1.751e-1439.67Zinc finger protein 699 OS=Homo sapiens GN=ZNF699 ... [more]
ZN479_HUMAN1.751e-1431.46Zinc finger protein 479 OS=Homo sapiens GN=ZNF479 ... [more]
ZN461_HUMAN1.751e-1438.46Zinc finger protein 461 OS=Homo sapiens GN=ZNF461 ... [more]
Z354B_MOUSE2.287e-1444.33Zinc finger protein 354B OS=Mus musculus GN=Znf354... [more]
Z354A_RAT2.287e-1444.33Zinc finger protein 354A OS=Rattus norvegicus GN=Z... [more]
Z354A_MOUSE2.287e-1444.33Zinc finger protein 354A OS=Mus musculus GN=Znf354... [more]
Z354A_HUMAN2.287e-1444.33Zinc finger protein 354A OS=Homo sapiens GN=ZNF354... [more]
ZN362_HUMAN2.987e-1435.09Zinc finger protein 362 OS=Homo sapiens GN=ZNF362 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002D11_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV713022 ID=CV713022; Name=CV713022; organism=Citrus sinensis; type=EST; length=858bp
TTTTTTTTTTTTTTTTTAATTTGAAGAATGCGGCCTAACCCCTAAACTAT
ATTTAAGAAACAACACTCAAAAAGAGTTCTGTATATAGTACATGATTCTG
CATGCCTCTTTGGCCCCAGAATCTTCATTTCCCGTGGCCATATTTTACAA
TACCAGCGTAATTTACAGGATATCTTCAGGCAGATAAGTTTTCATAATGC
CCTGTTTTCCGTCTATGTCGACTAATATCAGATACAAACCTGAAAGAAAG
GCCACAACCCTCAAACTTGCATTTGTATGGCCGCTCGCCTGTGTGCACCC
GTATATGCTCAGTCCTAGCCCAAGCCCACTTGAATGACATAGAGCAACCT
TTCCATGGGCACTTGAGCGGCCTCTCATCATCATGAACACGCTGATGAAT
TATTGCATATTTGTGGGAGCTAAACCTCTTCCCACACCCTTCGTGCGGGC
AGCGGTTGCGTTTGTGCAAGGATAGTTCTCTCTTCGTCTCAAAACTCATG
CGGCAGCCATCTAGATCACACCTGTGATGCCCCTTTAAGATCTTTTTCTT
ATCCTGGCAAGGAGCTGGAACACTTTCACGGTTTCTCATTGTCTTTGTTG
CGCGCTTCTCAGCAATCTCTCTGATGTCAACTTCACTTGTATTAGCTGCA
TCTTTCCCAGCCCGTGGCCTCAATCCTTCACAAGGACTCCTGATAAACCC
ACTGCCATTAAACTTGTTTTCTGTCAACCGCTCCAATTCTCTATTCCTTT
TTCTTCCTTTTCCAGCGCTAAAGCTGGGATCTTCCAAATTGGACTCATTG
CATTCCCTCTCTTTGTTGTCTTTTGATGAATATGCTTCATTGCCATTGCA
AAATTTTT
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