EY720234

Overview
NameEY720234
Unique NameEY720234
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720234 vs. ExPASy Swiss-Prot
Match: MQO_PROMP (Probable malate:quinone oxidoreductase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=mqo PE=3 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.446e-38
Identity = 77/208 (37.02%), Postives = 129/208 (62.02%), Query Frame = 2
Query:   35 LAVLLKELDPGLQLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSIDIKKAVHINTQFEVSKQFWAYLTKKGTFGSSKSFISPVPHLSFVQGEKGVSFLKKRFETLSQQHAFSDMHYTEDRSEMAEWMPLMMPGRPLDEKIAVTRVMNGTDVNFGALTNQLLSHLNSAPDAQVQYSKRVNGLKR-NGAGWSVNIKDVNR 655
            LA+L+ E+ P +++ ++E ++   +ES+  +NNAGTGHA  CELNYTP   +G + I KA+ IN  FE S   WA L  KG     K F+  +PH+SFV G + +SFLKKRF+ +S+   F+DM ++   +++  W PL+   R   +K+A TR+  GTD+NF ALT + L++++   + ++ Y+  +  LK+ +   W + ++ + +
Sbjct:   27 LALLITEILPTIKILIIEKLNKPGSESTGAFNNAGTGHAANCELNYTPVDENGDLQIDKALFINRSFENSMSLWASLYSKGKI-DIKKFLKFIPHISFVTGTENISFLKKRFKAMSKYPEFADMEFSSSFNQIKSWAPLITTCRDPLDKVAATRIKRGTDINFQALTREYLTYISKNKNVEIFYNTELIDLKKTDKKQWKLKVRSLGK 233          

HSP 2 Score: 21.9422 bits (45), Expect = 1.446e-38
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 3
Query:    3 VLVGAGIMSAT 35
            +LVGAGIMS T
Sbjct:   16 ILVGAGIMSGT 26          
BLAST of EY720234 vs. ExPASy Swiss-Prot
Match: MQO_PROM5 (Probable malate:quinone oxidoreductase OS=Prochlorococcus marinus (strain MIT 9515) GN=mqo PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.446e-38
Identity = 84/204 (41.18%), Postives = 124/204 (60.78%), Query Frame = 2
Query:   35 LAVLLKELDPGLQLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSIDIKKAVHINTQFEVSKQFWAYLTKKGTFGSSKSFISPVPHLSFVQGEKGVSFLKKRFETLSQQHAFSDMHYTEDRSEMAEWMPLMMPGR-PLDEKIAVTRVMNGTDVNFGALTNQLLSHLNSAPDAQVQYSKRVNGLKR-NGAGWSVNI 640
            LA+LL E+ P L++ ++E +    +ESS  +NNAGTGHA  CELNYTP    G + I+KA+ IN  FE S   WA L         K F+  +PH+SFV G + VSFLKKRF+ +++   F DM ++   ++++ W PL+   R PLDE +A TRV  GTD+NF  LT + L +++   + ++ Y   +N LK+ +   W +NI
Sbjct:   27 LALLLTEILPELKILIIEKLKIPGSESSGAFNNAGTGHAANCELNYTPLDDYGHLKIEKALSINRSFEKSMSLWASLYSSQKI-DIKKFLKFIPHISFVTGSENVSFLKKRFKKMTEYKEFEDMEFSSSFNQISSWAPLITKSRNPLDE-VAATRVKRGTDINFEVLTREYLKYISKNKNVEISYETELNDLKKTSNKEWELNI 228          

HSP 2 Score: 21.9422 bits (45), Expect = 1.446e-38
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 3
Query:    3 VLVGAGIMSAT 35
            +LVGAGIMS T
Sbjct:   16 ILVGAGIMSGT 26          
BLAST of EY720234 vs. ExPASy Swiss-Prot
Match: MQO_PROM0 (Probable malate:quinone oxidoreductase OS=Prochlorococcus marinus (strain MIT 9301) GN=mqo PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.957e-37
Identity = 79/208 (37.98%), Postives = 124/208 (59.62%), Query Frame = 2
Query:   35 LAVLLKELDPGLQLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSIDIKKAVHINTQFEVSKQFWAYLTKKGTFGSSKSFISPVPHLSFVQGEKGVSFLKKRFETLSQQHAFSDMHYTEDRSEMAEWMPLMMPGRPLDEKIAVTRVMNGTDVNFGALTNQLLSHLNSAPDAQVQYSKRVNGLKR-NGAGWSVNIKDVNR 655
            LA+L+ E+ P ++  ++E +++  +ES+  +NNAGTGHA  CELNYTP    G++ I KA+ IN  FE S   WA L + G     K F+  +PH+SFV G+  +SFLKKRF+ +++   F DM ++    E++ W PL+   R    +IA TR+  GTD+NF ALT + LS ++   + +++Y   +  LK+ +   W + I    R
Sbjct:   28 LALLISEVLPDIKFLIIEKLNAPGSESTGAFNNAGTGHAANCELNYTPLDEKGNLKIDKALSINRSFETSMSLWASLYEAGKI-DIKKFLKFIPHISFVSGQDNISFLKKRFQKMTENPEFIDMEFSSSFDEISSWAPLITKDRNPSTQIAATRIGRGTDINFEALTKEYLSLVSLNKNVEIRYKTELVDLKKIDKKQWELEISSEGR 234          
BLAST of EY720234 vs. ExPASy Swiss-Prot
Match: MQO_PROMS (Probable malate:quinone oxidoreductase OS=Prochlorococcus marinus (strain AS9601) GN=mqo PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 2.653e-37
Identity = 79/208 (37.98%), Postives = 124/208 (59.62%), Query Frame = 2
Query:   35 LAVLLKELDPGLQLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSIDIKKAVHINTQFEVSKQFWAYLTKKGTFGSSKSFISPVPHLSFVQGEKGVSFLKKRFETLSQQHAFSDMHYTEDRSEMAEWMPLMMPGRPLDEKIAVTRVMNGTDVNFGALTNQLLSHLNSAPDAQVQYSKRVNGLKR-NGAGWSVNIKDVNR 655
            LA+L+ E+ P ++  ++E +++  +ES+  +NNAGTGHA  CELNYTP    G++ I KA+ IN  FE S   WA L + G     K F+  +PH+SFV G+  +SFLKKRF+ +++   F DM ++    E++ W PL+   R    +IA TR+  GTD+NF ALT + LS ++   + +++Y   +  LK+ +   W + I    R
Sbjct:   28 LALLISEVLPDIKFLILEKLNAPGSESTGAFNNAGTGHAANCELNYTPLDEKGNLIIDKALSINRSFETSMSLWASLYEAGKI-DIKKFLKFIPHISFVSGQDNISFLKKRFQKMTENPEFIDMEFSTSFDEISSWAPLITKDRNPSTQIAATRIDRGTDINFEALTKEYLSLVSLNKNVEIRYKTELVDLKKIDKKQWELEISSEGR 234          

HSP 2 Score: 22.7126 bits (47), Expect = 2.653e-37
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 3
Query:    3 VLVGAGIMSAT 35
            VLVGAGIMS+T
Sbjct:   17 VLVGAGIMSST 27          
BLAST of EY720234 vs. ExPASy Swiss-Prot
Match: MQO_PROM9 (Probable malate:quinone oxidoreductase OS=Prochlorococcus marinus (strain MIT 9312) GN=mqo PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 4.502e-37
Identity = 79/208 (37.98%), Postives = 122/208 (58.65%), Query Frame = 2
Query:   35 LAVLLKELDPGLQLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSIDIKKAVHINTQFEVSKQFWAYLTKKGTFGSSKSFISPVPHLSFVQGEKGVSFLKKRFETLSQQHAFSDMHYTEDRSEMAEWMPLMMPGRPLDEKIAVTRVMNGTDVNFGALTNQLLSHLNSAPDAQVQYSKRVNGLKR-NGAGWSVNIKDVNR 655
            LA+L+ E+ P ++  ++E + +  +ES+  +NNAGTGHA  CELNYTP    G++ I KA+ IN  FE S   WA L + G     K F+  +PH+SFV G+  +SFLKKRF+ ++    F DM ++    E++ W PL+   R    +IA TR+  GTD+NF ALT + LS ++   + +++Y   +  LK+ +   W + I    R
Sbjct:   28 LALLISEVLPDIKFLIIEKLKAPGSESTGAFNNAGTGHAANCELNYTPLDEKGNLKIDKALSINRSFERSMSLWASLYESGKI-DIKKFLKFIPHISFVSGQDNISFLKKRFQKMTDNPEFIDMEFSTSFDEISSWAPLITKDRNPSTQIAATRIGRGTDINFEALTKEYLSLVSLNKNVEIRYKTELVDLKKIDKKQWELEISSEGR 234          

HSP 2 Score: 22.7126 bits (47), Expect = 4.502e-37
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 3
Query:    3 VLVGAGIMSAT 35
            VLVGAGIMS+T
Sbjct:   17 VLVGAGIMSST 27          
BLAST of EY720234 vs. ExPASy Swiss-Prot
Match: MQO_PROM2 (Probable malate:quinone oxidoreductase OS=Prochlorococcus marinus (strain MIT 9215) GN=mqo PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.693e-37
Identity = 78/208 (37.50%), Postives = 126/208 (60.58%), Query Frame = 2
Query:   35 LAVLLKELDPGLQLEVVELMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSIDIKKAVHINTQFEVSKQFWAYLTKKGTFGSSKSFISPVPHLSFVQGEKGVSFLKKRFETLSQQHAFSDMHYTEDRSEMAEWMPLMMPGRPLDEKIAVTRVMNGTDVNFGALTNQLLSHLNSAPDAQVQY-SKRVNGLKRNGAGWSVNIKDVNR 655
            LA+L+ E+ P ++  ++E +++  +ES+  +NNAGTGHA  CELNYTP    G++ I KA+ IN  FE S   WA L + G     K F+  +PH+SFV G+  +SFLKKRF+ +++   F DM ++    E++ W PL+   R    +IA TR+  GTD+NF ALT + LS ++   + +++Y ++ ++ +K +   W + I    R
Sbjct:   28 LALLISEVLPDIKFLIIEKLNAPGSESTGAFNNAGTGHAANCELNYTPLDEKGNLKIDKALSINRSFETSMSLWASLYEAGKI-DIKKFLKFIPHISFVSGQDNISFLKKRFQKMTENPEFIDMEFSTSFDEISSWAPLITKDRNPSTQIAATRIGRGTDINFEALTKEYLSLVSLNKNVEIRYKTELIDLMKIDKKQWELEISSEGR 234          
The following BLAST results are available for this feature:
BLAST of EY720234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
MQO_PROMP1.446e-3837.02Probable malate:quinone oxidoreductase OS=Prochlor... [more]
MQO_PROM51.446e-3841.18Probable malate:quinone oxidoreductase OS=Prochlor... [more]
MQO_PROM01.957e-3737.98Probable malate:quinone oxidoreductase OS=Prochlor... [more]
MQO_PROMS2.653e-3737.98Probable malate:quinone oxidoreductase OS=Prochlor... [more]
MQO_PROM94.502e-3737.98Probable malate:quinone oxidoreductase OS=Prochlor... [more]
MQO_PROM25.693e-3737.50Probable malate:quinone oxidoreductase OS=Prochlor... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-003-H02-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720234 ID=EY720234; Name=EY720234; organism=Citrus sinensis; type=EST; length=866bp
TAGTACTGGTAGGTGCGGGCATCATGAGTGCCACCTCGCCGTACTGCTCA
AAGAGCTCGACCCCGGCCTCCAGCTGGAAGTCGTTGAGCTGATGGATTCG
GGTGCCGCGGAAAGTTCCAACCCGTGGAACAACGCCGGTACCGGCCACGC
CGGGCTGTGTGAGCTGAACTACACACCGCAGGCCGCTGACGGCTCCATCG
ACATCAAGAAAGCTGTGCACATCAACACCCAATTCGAGGTGTCGAAGCAG
TTCTGGGCTTACTTGACCAAGAAAGGCACCTTTGGCTCGTCCAAGTCCTT
TATCAGCCCCGTGCCGCACCTGAGTTTCGTGCAGGGCGAGAAAGGCGTGT
CGTTCCTCAAGAAGCGTTTTGAAACCCTCAGCCAGCAACACGCGTTCTCG
GACATGCACTACACCGAAGACCGCAGCGAAATGGCCGAGTGGATGCCGCT
GATGATGCCCGGCCGCCCCCTGGACGAAAAAATCGCTGTCACCCGCGTGA
TGAACGGCACCGACGTCAACTTCGGCGCCCTGACCAACCAACTGCTCTCG
CACCTGAACAGCGCACCGGATGCCCAGGTTCAGTACAGCAAGCGCGTCAA
CGGGCTCAAGCGCAACGGCGCCGGCTGGAGCGTGAACATCAAGGACGTCA
ACCGCGGCCATTCCCGTGGATGTGACGCCAATTTCTGGTCCTCGGCGCCG
GGTGGCGCGGCCTGCCGCTGCTGGAACCTCGGGCATCAAAAAAAGCAATG
CTCCGGCGGGTTCCCCTTAACGGCCAGTGGCTGCGTTGCAACACCCGGAA
TGGTCAAGCCCCCCCCGGGCAGTGGTACACCCCGGCGGCCGGGGGGGCGC
GCACCAGGTGCTGGCC
back to top