CV712972

Overview
NameCV712972
Unique NameCV712972
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: ANTR5_ARATH (Probable anion transporter 5 OS=Arabidopsis thaliana GN=ANTR5 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.985e-25
Identity = 64/161 (39.75%), Postives = 97/161 (60.25%), Query Frame = -3
Query:  370 VLPWLTMAVFANMGGWIADTLVSKG-LSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG-----------SWDDVFKVAVVLYIIGTLVWNLFATGERVLE 816
            ++P+L M VF+ +GG+IAD L++K  LS+T  RK + ++GFL  +  L  L   RT    +LC + + G  A  ++G   NH DI PRYAG+++G+SNTAG LAG+ G   TG +L+             SW  VF +  +L I  ++V+ LF+TGER+ +
Sbjct:  272 MVPYLNMFVFSIVGGFIADYLITKRILSVTRTRKFLNTVGFLIASAALMVLPMFRTENGVILCSSVALGFLALGRAGFAVNHMDIAPRYAGIVMGVSNTAGTLAGIIGVDLTGKLLEASKLVYSDLSHPESWRVVFFIPGLLCIFSSVVFLLFSTGERIFD 432          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: PHT45_ORYSJ (Probable anion transporter 5, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;5 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.074e-21
Identity = 61/150 (40.67%), Postives = 82/150 (54.67%), Query Frame = -3
Query:  382 VLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRT---PAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWD-DVFKVAVVLYIIGTLVWNLFATGE 816
            VLP L   +  ++    AD L+S G+  T VRKI Q+I FL PA F+  LS V     P   V  +       +F+ SGLY  HQDI   YA +LLG++NT G + G+ G A TGY+L    SW   +F  ++  Y+ GT VW  FA+ E
Sbjct:  311 VLPPLGSMIITSIAAPFADNLISNGVDTTKVRKICQTIAFLSPATFM-MLSSVDLGVPPWEIVAFLTSGLALSSFALSGLYCTHQDISREYASILLGITNTVGAVPGIVGVALTGYLLDTTHSWSISLFAPSIFFYLTGTAVWLAFASSE 459          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: ANTR6_ARATH (Probable anion transporter 6, chloroplastic OS=Arabidopsis thaliana GN=ANTR6 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.074e-21
Identity = 56/149 (37.58%), Postives = 84/149 (56.38%), Query Frame = -3
Query:  382 VLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLS-HVRTPAMAVL-CMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYIL-QRGSWD-DVFKVAVVLYIIGTLVWNLFATGE 816
            +LP L   V  ++    AD L++ G+  T VRKI Q+I F+ PA  +T  S  +  P   ++  +       +F+ SGLY  HQDI P YA +LLG++NT G + G+ G A TG++L    SW   +F  ++  Y+ GT+VW  FA+ E
Sbjct:  360 ILPPLASIVVTSLASQFADYLITNGVDTTTVRKICQTIAFVAPAICMTLSSVDIGLPPWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGFLLDSTHSWTMSLFVPSIFFYLTGTVVWLAFASSE 508          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: S17A9_MOUSE (Solute carrier family 17 member 9 OS=Mus musculus GN=Slc17a9 PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19
Identity = 52/148 (35.14%), Postives = 82/148 (55.41%), Query Frame = -3
Query:  376 VLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWDDVFKVAVVLYIIGTLVWNLFATGERV 816
            V+PW+     +   G+I+D L+S+G  +  VRK MQ +G    + F   L H  +   A++  + S G   F+ SG+  N QD+ P  AG L G++NTAG LAGV G   +GY+++  GSW  VF +  ++  +G   + +F   +RV
Sbjct:  291 VVPWMLAIPASLFSGFISDRLISQGYRVITVRKFMQVMGLGLSSIFALCLGHTTSFLKAMIFASASIGFQTFNHSGISVNIQDLAPSCAGFLFGVANTAGALAGVVGVCLSGYLIETTGSWTCVFHLVAIISNLGLGTFLVFGKAQRV 438          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: S17A9_HUMAN (Solute carrier family 17 member 9 OS=Homo sapiens GN=SLC17A9 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 8.371e-19
Identity = 50/148 (33.78%), Postives = 81/148 (54.73%), Query Frame = -3
Query:  376 VLPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ-RGSWDDVFKVAVVLYIIGTLVWNLFATGERV 816
            V+PWL     +   G+++D L+++G     VRK+MQ +G    + F   L H  +   +V+  + S G   F+ SG+  N QD+ P  AG L G++NTAG LAGV G    GY+++  GSW  +F +  ++  +G   + +F   +RV
Sbjct:  280 VVPWLVAIPASLFSGFLSDHLINQGYRAITVRKLMQGMGLGLSSVFALCLGHTSSFCESVVFASASIGLQTFNHSGISVNIQDLAPSCAGFLFGVANTAGALAGVVGVCLGGYLMETTGSWTCLFNLVAIISNLGLCTFLVFGQAQRV 427          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: VGLU2_RAT (Vesicular glutamate transporter 2 OS=Rattus norvegicus GN=Slc17a6 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.426e-18
Identity = 56/149 (37.58%), Postives = 81/149 (54.36%), Query Frame = -3
Query:  379 LPWLTMAVFANMGGWIADTLVSKG-LSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ---RGSWDDVFKVAVVLYIIGTLVWNLFATGER 813
            +P L M +   +GG IAD L SK  LS T VRKIM   GF   A  L  + +  T  +A+  +  + G   F+ SG   NH DI PRYA +L+G+SN  G L+G+      G + +   R  W  VF +A +++  G + + LFA+GE+
Sbjct:  354 VPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFGMEATLLLVVGYSHTRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTKNKSREEWQYVFLIAALVHYGGVIFYALFASGEK 502          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: VGLU2_HUMAN (Vesicular glutamate transporter 2 OS=Homo sapiens GN=SLC17A6 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.255e-18
Identity = 55/149 (36.91%), Postives = 81/149 (54.36%), Query Frame = -3
Query:  379 LPWLTMAVFANMGGWIADTLVSKG-LSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ---RGSWDDVFKVAVVLYIIGTLVWNLFATGER 813
            +P L M +   +GG IAD L SK  LS T VRKIM   GF   A  L  + +  T  +A+  +  + G   F+ SG   NH DI PRYA +L+G+SN  G L+G+      G + +   R  W  VF +A +++  G + + +FA+GE+
Sbjct:  354 VPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFGMEATLLLVVGYSHTRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTKNKSREEWQYVFLIAALVHYGGVIFYAIFASGEK 502          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: VGLU2_BOVIN (Vesicular glutamate transporter 2 OS=Bos taurus GN=SLC17A6 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.255e-18
Identity = 55/149 (36.91%), Postives = 81/149 (54.36%), Query Frame = -3
Query:  379 LPWLTMAVFANMGGWIADTLVSKG-LSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ---RGSWDDVFKVAVVLYIIGTLVWNLFATGER 813
            +P L M +   +GG IAD L SK  LS T VRKIM   GF   A  L  + +  T  +A+  +  + G   F+ SG   NH DI PRYA +L+G+SN  G L+G+      G + +   R  W  VF +A +++  G + + +FA+GE+
Sbjct:  354 VPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFGMEATLLLVVGYSHTRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTKNKSREEWQYVFLIAALVHYGGVIFYAIFASGEK 502          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: VGLU3_RAT (Vesicular glutamate transporter 3 OS=Rattus norvegicus GN=Slc17a8 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.209e-17
Identity = 53/149 (35.57%), Postives = 82/149 (55.03%), Query Frame = -3
Query:  379 LPWLTMAVFANMGGWIADTLVS-KGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ---RGSWDDVFKVAVVLYIIGTLVWNLFATGER 813
            +P + M +   +GG +AD L S K L+ TAVRKIM   GF   A  L  +    T  +A+  +  + G   F+ SG   NH DI PRYA +L+G+SN  G L+G+      G + +   R  W +VF +A +++  G + + +FA+GE+
Sbjct:  358 VPHMVMTIVVPIGGQLADYLRSRKILTTTAVRKIMNCGGFGMEATLLLVVGFSHTKGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGAMTKHKTREEWQNVFLIAALVHYSGVIFYGVFASGEK 506          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: VGLU3_MOUSE (Vesicular glutamate transporter 3 OS=Mus musculus GN=Slc17a8 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.209e-17
Identity = 53/149 (35.57%), Postives = 82/149 (55.03%), Query Frame = -3
Query:  379 LPWLTMAVFANMGGWIADTLVS-KGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ---RGSWDDVFKVAVVLYIIGTLVWNLFATGER 813
            +P + M +   +GG +AD L S K L+ TAVRKIM   GF   A  L  +    T  +A+  +  + G   F+ SG   NH DI PRYA +L+G+SN  G L+G+      G + +   R  W +VF +A +++  G + + +FA+GE+
Sbjct:  371 VPHMVMTIVVPIGGQLADYLRSRKILTTTAVRKIMNCGGFGMEATLLLVVGFSHTKGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGAMTKHKTREEWQNVFLIAALVHYSGVIFYGVFASGEK 519          
The following BLAST results are available for this feature:
BLAST of CV712972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
ANTR5_ARATH5.985e-2539.75Probable anion transporter 5 OS=Arabidopsis thalia... [more]
PHT45_ORYSJ3.074e-2140.67Probable anion transporter 5, chloroplastic OS=Ory... [more]
ANTR6_ARATH3.074e-2137.58Probable anion transporter 6, chloroplastic OS=Ara... [more]
S17A9_MOUSE1.291e-1935.14Solute carrier family 17 member 9 OS=Mus musculus ... [more]
S17A9_HUMAN8.371e-1933.78Solute carrier family 17 member 9 OS=Homo sapiens ... [more]
VGLU2_RAT5.426e-1837.58Vesicular glutamate transporter 2 OS=Rattus norveg... [more]
VGLU2_HUMAN9.255e-1836.91Vesicular glutamate transporter 2 OS=Homo sapiens ... [more]
VGLU2_BOVIN9.255e-1836.91Vesicular glutamate transporter 2 OS=Bos taurus GN... [more]
VGLU3_RAT1.209e-1735.57Vesicular glutamate transporter 3 OS=Rattus norveg... [more]
VGLU3_MOUSE1.209e-1735.57Vesicular glutamate transporter 3 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002C09_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712972 ID=CV712972; Name=CV712972; organism=Citrus sinensis; type=EST; length=818bp
ATTAAAGCAGCAGAATATAATGGGTTAATTAAAGAACATATGAGGTTTCC
TTTGAAGCATTACATGAGCTCAGGCGAAGGTTTAATGGGTGCAAATTTCC
CATCTCGTTCCCTGGGATTGGAAAAATGTATATAGGAAAGAAAAACCTCT
AAAAGGGCATTTCAGAAACTCAAAAGTTGTAAAAGGGCCTCGCTAATCGG
CGAATATCTTCCCTAGTAGCATCTTAATTTAACCTTGCTTAGCAGGGTTT
CATGCCCCAGCATGGATGGCATTGTTATCGCCTTTTGATTTTCCTTCAAT
TTCTTGATGACTTGGTCTCTTCTTCTTTACTCATTACAGCATCTTCCTCC
CATTCTTGCACTTCGTCTACTCAAGAACTCTCTCTCCCGTTGCAAATAAG
TTCCAGACTAAGGTGCCAATGATGTATAAGACAACAGCTACCTTGAATAC
ATCATCCCAAGAACCTCGTTGGAGTATGTAACCGGTTGCAGCTGTACCGA
AAACACCAGCAAGCACTCCTGCTGTGTTTGATAGTCCTAAGAGAACTCCA
GCATAGCGCGGCCCAATATCTTGATGATTGGAATAAAGACCAGATTGTGA
GAATGCATCAGATCCCTGACTGCATGCCATGCATAGCACTGCCATTGCAG
GAGTCCTGACATGGCTCAGCTGTGTGAGAAAGAAGGCTGGTCCCAAAAAC
CCAATGGATTGCATGATCTTACGAACTGCTGTTATGGAAAGTCCTTTGCT
AACAAGTGTATCTGCAATCCAGCCTCCCATATTTGCAAAAACAGCCATGG
TCAACCAAGGCAAGACAC
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