CV712972

Overview
NameCV712972
Unique NameCV712972
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: YLD2_CAEEL (Uncharacterized transporter C38C10.2 OS=Caenorhabditis elegans GN=C38C10.2 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 8.964e-13
Identity = 41/150 (27.33%), Postives = 72/150 (48.00%), Query Frame = -3
Query:  382 LPWLTMAVFANMGGWIADTLVSKG-LSITAVRKIMQSIGFLGPAFFLTQLSH--VRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS---WDDVFKVAVVLYIIGTLVWNLFATGE 813
            +P++   +  N GG +ADTL SKG LS    R+    +  +G   FL    +       + ++ + C         +G   N+ +I P ++G ++G  NT   LAG+   A + Y+   G+   W  V  +   +  IG L++++FA+GE
Sbjct:  315 IPYIAYFLAINAGGVLADTLRSKGILSTLNTRRAAMLVALIGQGIFLVASGYCGCGQDVLVIIFITCGMAISGLQYAGFVVNYLEIAPPFSGTVMGTGNTISALAGIISPAVSSYLTPNGTQEEWQMVLWLTAGILTIGALLFSIFASGE 464          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: S17A4_HUMAN (Putative small intestine sodium-dependent phosphate transport protein OS=Homo sapiens GN=SLC17A4 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.997e-12
Identity = 46/149 (30.87%), Postives = 75/149 (50.34%), Query Frame = -3
Query:  382 LPWLTMAVFANMGGWIADTLVS-KGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTP-AMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS---WDDVFKVAVVLYIIGTLVWNLFATGE 813
            LP++   +   +GG +AD L+S K L +  +RK+  +IG L P+  L  L  VR+  +M +  +  S    +F +SG   N  DI PRY G L GL      +AG     A G+ + + S   W +VF ++  + I G + + +F   +
Sbjct:  336 LPFVVGCICIILGGLLADFLLSRKILRLITIRKLFTAIGVLFPSVILVSLPWVRSSHSMTMTFLVLSSAISSFCESGALVNFLDIAPRYTGFLKGLLQVFAHIAGAISPTAAGFFISQDSEFGWRNVFLLSAAVNISGLVFYLIFGRAD 484          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: NPT4_HUMAN (Sodium-dependent phosphate transport protein 4 OS=Homo sapiens GN=SLC17A3 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.449e-12
Identity = 44/150 (29.33%), Postives = 77/150 (51.33%), Query Frame = -3
Query:  382 LPWLTMAVFANMGGWIADTLVSKGLSITAVRKIMQSIGFLGPAFFLTQLSHVRT---PAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG---SWDDVFKVAVVLYIIGTLVWNLFATGE 813
            LP++   V   +GG++AD L++K   +  VRKI   +G L  +  +  L ++ +    A A+L ++C  G     QSG+Y N  DI PRY+  L+G S     +A V     +G++L +     W +VF +   + ++G L + +F   +
Sbjct:  260 LPFIVAWVIGMVGGYLADFLLTKKFRLITVRKIATILGSLPSSALIVSLPYLNSGYITATALLTLSC--GLSTLCQSGIYINVLDIAPRYSSFLMGASRGFSSIAPVIVPTVSGFLLSQDPEFGWRNVFFLLFAVNLLGLLFYLIFGEAD 407          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: NPT1_HUMAN (Sodium-dependent phosphate transport protein 1 OS=Homo sapiens GN=SLC17A1 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.589e-12
Identity = 47/151 (31.13%), Postives = 77/151 (50.99%), Query Frame = -3
Query:  382 LPWLTMAVFANMGGWIADTLVSKG-LSITAVRKIMQSIGFLGPAFF---LTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR---GSWDDVFKVAVVLYIIGTLVWNLFATGE 813
            LP+L   +  N+ G ++D  +++  LS+ AVRK+  + GFL PA F   L  LS      +  L +A + GS  F   G++ N  DI PRY G +   S   G++ G+  +  TG IL++    +W   F +   + + G + + + AT E
Sbjct:  306 LPYLFAWICGNLAGQLSDFFLTRNILSVIAVRKLFTAAGFLLPAIFGVCLPYLSSTFYSIVIFLILAGATGS--FCLGGVFINGLDIAPRYFGFIKACSTLTGMIGGLIASTLTGLILKQDPESAWFKTFILMAAINVTGLIFYLIVATAE 454          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: NPT3_HUMAN (Sodium-dependent phosphate transport protein 3 OS=Homo sapiens GN=SLC17A2 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.766e-11
Identity = 38/118 (32.20%), Postives = 64/118 (54.24%), Query Frame = -3
Query:  466 LPWLTMAVFANMGGWIADTLVSKGL-SITAVRKIMQSIGFLGPAFFLTQLSHVRTP-AMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQR 813
            LP++  A    +GG +AD L+S+ L  +  VRK+  S+G L P+     L  V +   + ++ +    G+     SG   N  DI PRYA  L+G+S   G++AG+  + ATG+++ +
Sbjct:  317 LPFIAAASCTILGGQLADFLLSRNLLRLITVRKLFSSLGLLLPSICAVALPFVASSYVITIILLILIPGTSNLCDSGFIINTLDIAPRYASFLMGISRGFGLIAGIISSTATGFLISQ 434          
BLAST of CV712972 vs. ExPASy Swiss-Prot
Match: S17A4_MOUSE (Putative small intestine sodium-dependent phosphate transport protein OS=Mus musculus GN=Slc17a4 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.919e-11
Identity = 46/149 (30.87%), Postives = 72/149 (48.32%), Query Frame = -3
Query:  382 LPWLTMAVFANMGGWIADTLVS-KGLSITAVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLC-MACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGS---WDDVFKVAVVLYIIGTLVWNLFATGE 813
            LP++   V   +GG +AD L+S K L +  +RK+  ++G L  +  L  L  VR+     +  +  S    +   SG   N  DI PRYAG L GL      LAG       G+ + + S   W +VF +A  + ++G L + +F+  E
Sbjct:  331 LPFMFGCVCIILGGLLADFLLSRKILRLVTIRKLFTAVGVLASSGILLPLPWVRSSRSTTMAFLVLSSVFASLCDSGALINFLDIAPRYAGFLKGLLQVFSYLAGGIAPTVAGFFISQDSEFGWRNVFFLAAAIDVVGLLFYLIFSRAE 479          
The following BLAST results are available for this feature:
BLAST of CV712972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
YLD2_CAEEL8.964e-1327.33Uncharacterized transporter C38C10.2 OS=Caenorhabd... [more]
S17A4_HUMAN1.997e-1230.87Putative small intestine sodium-dependent phosphat... [more]
NPT4_HUMAN4.449e-1229.33Sodium-dependent phosphate transport protein 4 OS=... [more]
NPT1_HUMAN7.589e-1231.13Sodium-dependent phosphate transport protein 1 OS=... [more]
NPT3_HUMAN3.766e-1132.20Sodium-dependent phosphate transport protein 3 OS=... [more]
S17A4_MOUSE4.919e-1130.87Putative small intestine sodium-dependent phosphat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002C09_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712972 ID=CV712972; Name=CV712972; organism=Citrus sinensis; type=EST; length=818bp
ATTAAAGCAGCAGAATATAATGGGTTAATTAAAGAACATATGAGGTTTCC
TTTGAAGCATTACATGAGCTCAGGCGAAGGTTTAATGGGTGCAAATTTCC
CATCTCGTTCCCTGGGATTGGAAAAATGTATATAGGAAAGAAAAACCTCT
AAAAGGGCATTTCAGAAACTCAAAAGTTGTAAAAGGGCCTCGCTAATCGG
CGAATATCTTCCCTAGTAGCATCTTAATTTAACCTTGCTTAGCAGGGTTT
CATGCCCCAGCATGGATGGCATTGTTATCGCCTTTTGATTTTCCTTCAAT
TTCTTGATGACTTGGTCTCTTCTTCTTTACTCATTACAGCATCTTCCTCC
CATTCTTGCACTTCGTCTACTCAAGAACTCTCTCTCCCGTTGCAAATAAG
TTCCAGACTAAGGTGCCAATGATGTATAAGACAACAGCTACCTTGAATAC
ATCATCCCAAGAACCTCGTTGGAGTATGTAACCGGTTGCAGCTGTACCGA
AAACACCAGCAAGCACTCCTGCTGTGTTTGATAGTCCTAAGAGAACTCCA
GCATAGCGCGGCCCAATATCTTGATGATTGGAATAAAGACCAGATTGTGA
GAATGCATCAGATCCCTGACTGCATGCCATGCATAGCACTGCCATTGCAG
GAGTCCTGACATGGCTCAGCTGTGTGAGAAAGAAGGCTGGTCCCAAAAAC
CCAATGGATTGCATGATCTTACGAACTGCTGTTATGGAAAGTCCTTTGCT
AACAAGTGTATCTGCAATCCAGCCTCCCATATTTGCAAAAACAGCCATGG
TCAACCAAGGCAAGACAC
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