CV712955

Overview
NameCV712955
Unique NameCV712955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712955 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 8.954e-63
Identity = 119/198 (60.10%), Postives = 147/198 (74.24%), Query Frame = 2
Query:   95 NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQS-EVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKG--PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQL 679
            +FP+I++  L G +R A M ++ DACENWG +EL+NHGISHEL++ V+ + KEHY +  +QRFK+  ASK L+ V++ E  +LDWESTFFLRHLP SN+++IPDL+DD R  MKEFA+ELE +A                  KKVF G     PTFGTKVSNYPPCPKP+LIKGLRAHTDAGGIILLFQDD+VSGLQL
Sbjct:    5 SFPVINMELLQGSQRPAAMALLRDACENWGLYELLNHGISHELMNRVETVNKEHYRRFREQRFKEF-ASKTLDTVENVEPENLDWESTFFLRHLPTSNISQIPDLDDDCRSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQL 201          
BLAST of CV712955 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.762e-61
Identity = 117/198 (59.09%), Postives = 144/198 (72.73%), Query Frame = 2
Query:   98 FPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVND---LDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKG-PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQL 679
            FP+I++  L G+ER A ME ++DACENWGFFE++NHGIS EL+D V+++TK+HY +  +QRF +  ASK L+    +VN    LDWESTFF+RHLP SN+A+IPDL+DDYR+ MK FA ELE +A                   K F G  G PTFGTKVS+YPPCP+PDL+KGLRAHTDAGGIILLFQDD V GLQL
Sbjct:    7 FPVINMELLAGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEF-ASKTLKEGCDDVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQL 203          
BLAST of CV712955 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.095e-60
Identity = 116/198 (58.59%), Postives = 144/198 (72.73%), Query Frame = 2
Query:   98 FPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLEAVQSEVN---DLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKG-PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQL 679
            FP+I++  L G+ER A ME ++DACENWGFFE++NHGIS EL+D V+++TK+HY +  +QRF +  ASK L+    +VN    LDWESTFF+RHLP SN+A+IPDL+DDYR+ MK FA ELE +A                   K F G  G PTFGTKVS+YPPCP+PDL++GLRAHTDAGGIILLFQDD V GLQL
Sbjct:    7 FPVINMELLAGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEF-ASKTLKEGCDDVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQL 203          
BLAST of CV712955 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.693e-53
Identity = 107/192 (55.73%), Postives = 129/192 (67.19%), Query Frame = 2
Query:  122 LNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYG----KCMDQRFKQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKG--PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQL 679
            L G  RS  M ++ DACENWGFFEL+NHGISHE  +  + + KEHY     +  +QRFK+  A         + ++LDWESTFFLRHLP SN++++PDL++D    MKEFA+ LEK+A                  K+VF G     PTFGTKVSNYPPCPKP+LIKGLRAHTDAGGIILLFQDD VSGLQL
Sbjct:    4 LEGSRRSDAMAVLRDACENWGFFELLNHGISHEPNEQSETVNKEHYREHYRRFREQRFKEFAAKTLDSGENVDGDNLDWESTFFLRHLPTSNISQVPDLDEDCGSTMKEFALGLEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQL 195          
BLAST of CV712955 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.373e-39
Identity = 89/200 (44.50%), Postives = 122/200 (61.00%), Query Frame = 2
Query:  101 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFK-----QMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGS--KGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQL 679
            P+ID SKL+G ER+ TM  I + CE WGFF+LVNHGI  ELL+ V++++ E Y K  ++RF+     Q++ +   E     ++++DWE  F L+     +  E P    D+ + MKE+  E+ K+A                  KK F G     P FGTKVS+YPPCP+ DL+KGLRAHTDAGG+ILLFQDD+V GLQ+
Sbjct:    4 PVIDFSKLDGKERAETMARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECY-KLREERFEGSKPVQLLDTLVKEGDGQRLDNVDWEDVFVLQ-----DDNEWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQM 197          
BLAST of CV712955 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.562e-19
Identity = 60/201 (29.85%), Postives = 98/201 (48.76%), Query Frame = 2
Query:  101 PIIDLSKL-NGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFK-----QMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAE--IPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQL 679
            PIID+ +L +     + +E ++ AC+ WGFF+LVNHGI    LD V+   ++ +   M+++ K       +   G   V SE   LDW   FF    PV        P L   +R  ++ ++ E++ VA                  +K+F          +++ YPPCP+PD + GL  H+D+ G+ +L Q ++V GLQ+
Sbjct:   54 PIIDMKRLCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLF-DDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQI 253          
BLAST of CV712955 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.955e-17
Identity = 59/197 (29.95%), Postives = 99/197 (50.25%), Query Frame = 2
Query:  101 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASK-GLEAVQSEVNDLD--------WESTFFLRHLPVS--NMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD 658
            P+ID+S ++ DE     E++ +A + WG F+++NHGI  E+++ +Q++ KE + + + Q  K+++A K G ++++     L         W    F +  P S  N    P     YR+A +E+A  L KVA                   +   GS+   +  K++ YPPCP+PDL  G+ AHTD   I LL  ++
Sbjct:   58 PVIDISNVDDDEEKLVKEIV-EASKEWGIFQVINHGIPDEVIENLQKVGKEFFEE-VPQEEKELIAKKPGAQSLEGYGTSLQKEIEGKKGWVDHLFHKIWPPSAINYRYWPKNPPSYREANEEYAKWLRKVADGIFRSLSLGLGLEGHEMMEAA-GSEDIVYMLKINYYPPCPRPDLALGVVAHTDMSYITLLVPNE 251          
BLAST of CV712955 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.655e-16
Identity = 59/201 (29.35%), Postives = 93/201 (46.27%), Query Frame = 2
Query:   95 NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQ--RFKQMVASKGLEAVQSEVND---LDWES--TFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQ 676
            + P+I L+ ++G++R      I +ACE+WG F++V+HG+  +L+  + RL +E +    ++  RF      KG   V S +      DW    T+F       +    PD  + + K  +E++ +L  +A                   K             V+ YP CP+PDL  GL+ HTD G I LL Q D+V GLQ
Sbjct:   40 DIPVISLAGIDGEKRGEICRKIVEACEDWGIFQVVDHGVGDDLIADMTRLAREFFALPAEEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYFSYPTNSRDYTRWPDKPEGWIKVTEEYSNKLMTLACTLLGVLSEAMGLELEALTKACVDMDQKIV---VNYYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQ 236          
BLAST of CV712955 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.814e-16
Identity = 58/205 (28.29%), Postives = 92/205 (44.88%), Query Frame = 2
Query:  101 PIIDLSKLNGDE---RSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQ-------MVASKGLEAVQSEVNDLDWESTFFLRHLPVS--NMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQL 679
            P IDL ++  D    R+   E +  A  +WG   LVNHGIS EL+D V++  K  +   ++Q+ K         +   G +   +    L+WE  FF    P    +++  P    DY +A  E+A +L ++A                  +K   G +      K++ YP CP+P+L  G+ AHTD   +  +   + V GLQL
Sbjct:   52 PTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQL 255          
BLAST of CV712955 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.212e-16
Identity = 64/204 (31.37%), Postives = 97/204 (47.55%), Query Frame = 2
Query:  101 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVAS-KGLEAVQSEVNDLD--------WESTFFLRHLPVS--NMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQL 679
            P+IDL   N  E +  +E+I +A   WG F++VNHGI  + +  +Q++ KE +   + Q+ K+++A  +G + V+     L         W    F    P S  N    P+    YR+A +E+AV L  V                   KK   G     +  K++ YPPCP+PDL  G+ AHTD   I +L   +EV GLQ+
Sbjct:   44 PVIDLGSSNNTEENL-VELIAEASREWGIFQVVNHGIPDDAIAKLQKVGKEFFE--LPQQEKEVIAKPEGYQGVEGYGTKLQKELGGKKGWVDHLFHIIWPKSAVNYNFWPNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEKHELKKAS-GGDDLIYMLKINYYPPCPRPDLALGVVAHTDMSAITILV-PNEVQGLQV 242          
The following BLAST results are available for this feature:
BLAST of CV712955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
ACCO1_DORSP8.954e-6360.101-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO1_ORYSI3.762e-6159.091-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_ORYSJ1.095e-6058.591-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO_DENCR1.693e-5355.731-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
ACCO_MUSAC2.373e-3944.501-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
SRG1_ARATH3.562e-1929.85Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
FLS_SOLTU1.955e-1729.95Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
FL3H_DIACA1.655e-1629.35Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
LDOX_MALDO4.814e-1628.29Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
FLS_PETCR8.212e-1631.37Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002B24_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002B24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712955 ID=CV712955; Name=CV712955; organism=Citrus sinensis; type=EST; length=681bp
CCCCGCGGCTGCAGGCCTGGCTAGAGTTTTTTAAGTGATCATAGAGTAAG
AAGGGAGATTGTGGGAGTTAAGAAACAAACAAATAACAATGGAGAATTTT
CCAATTATTGACTTGTCAAAGCTCAATGGTGATGAGAGAAGTGCTACCAT
GGAAATGATCAATGATGCCTGTGAGAACTGGGGTTTCTTTGAGTTGGTGA
ATCATGGGATATCACATGAGCTGCTGGACACTGTTCAGAGGTTGACAAAG
GAGCATTACGGGAAGTGTATGGACCAAAGATTCAAGCAAATGGTGGCAAG
CAAGGGCCTTGAAGCTGTTCAGTCCGAAGTTAATGATTTGGACTGGGAAA
GCACTTTCTTCTTGCGCCACCTTCCTGTTTCAAACATGGCTGAAATCCCC
GATCTTGAAGATGATTACAGGAAGGCAATGAAGGAATTTGCCGTTGAATT
GGAGAAGGTTGCTGAGCAACTTCTGGAATTGTTGTGTGAGAATCTTGGGC
TGGAGGAAGGGTATTTGAAGAAAGTGTTTTATGGGTCCAAAGGACCAACC
TTTGGCACCAAGGTCAGCAATTACCCTCCATGCCCAAAACCAGATCTGAT
CAAGGGACTTAGGGCCCATACTGATGCTGGTGGCATCATCTTGCTCTTTC
AAGATGACGAAGTCAGTGGCCTCCAGCTGCT
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