CX043572 | Citrus Genome Database

Overview


Name	CX043572
Unique Name	CX043572
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	717

Libraries


Library Name	Type
Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CX043572 vs. ExPASy Swiss-Prot
Match: UBIQ_CAMDR (Ubiquitin OS=Camelus dromedarius PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.938e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   64 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 1.938e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 126.716 bits (317), Expect = 1.217e-28
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 717
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

[Close]

BLAST of CX043572 vs. ExPASy Swiss-Prot
Match: UBIQ_BOVIN (Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.938e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   64 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 1.938e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 126.716 bits (317), Expect = 1.217e-28
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 717
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

[Close]

BLAST of CX043572 vs. ExPASy Swiss-Prot
Match: UBIQ_TETPY (Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.532e-34
Identity = 72/76 (94.74%), Postives = 76/76 (100.00%), Query Frame = 1

Query:   64 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.591 bits (366), Expect = 2.532e-34
Identity = 72/76 (94.74%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 126.331 bits (316), Expect = 1.589e-28
Identity = 62/66 (93.94%), Postives = 66/66 (100.00%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 717
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

[Close]

BLAST of CX043572 vs. ExPASy Swiss-Prot
Match: UBIQ_SHEEP (Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.306e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   64 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 2 Score: 145.206 bits (365), Expect = 3.306e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 3 Score: 126.716 bits (317), Expect = 1.217e-28
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 717
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

[Close]

BLAST of CX043572 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.318e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   64 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.821 bits (364), Expect = 4.318e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 125.561 bits (314), Expect = 2.711e-28
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 717
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

[Close]

BLAST of CX043572 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYBB (Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.640e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   64 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 5.640e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 125.176 bits (313), Expect = 3.541e-28
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 717
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKEST
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKEST 66

[Close]

BLAST of CX043572 vs. ExPASy Swiss-Prot
Match: UBIQ_STRPU (Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.640e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   64 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 5.640e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 125.176 bits (313), Expect = 3.541e-28
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 717
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

[Close]

BLAST of CX043572 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.640e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:   64 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 5.640e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 125.176 bits (313), Expect = 3.541e-28
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 717
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

[Close]

BLAST of CX043572 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.640e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1

Query:   64 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 5.640e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 125.176 bits (313), Expect = 3.541e-28
Identity = 62/66 (93.94%), Postives = 64/66 (96.97%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 717
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

[Close]

BLAST of CX043572 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.641e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 1

Query:   64 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.895 bits (359), Expect = 1.641e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 123.635 bits (309), Expect = 1.030e-27
Identity = 61/66 (92.42%), Postives = 64/66 (96.97%), Query Frame = 1

Query:  520 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 717
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66

The following BLAST results are available for this feature:

BLAST of CX043572 vs. ExPASy Swiss-Prot

BLAST of CX043572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_CAMDR	1.938e-34	96.05	Ubiquitin OS=Camelus dromedarius PE=3 SV=2	[more]
UBIQ_BOVIN	1.938e-34	96.05	Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1	[more]
UBIQ_TETPY	2.532e-34	94.74	Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 ...	[more]
UBIQ_SHEEP	3.306e-34	94.74	Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2	[more]
UBIQ_EIMBO	4.318e-34	94.74	Ubiquitin OS=Eimeria bovis PE=2 SV=1	[more]
UBIQ_TRYBB	5.640e-34	94.74	Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1	[more]
UBIQ_STRPU	5.640e-34	94.74	Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV...	[more]
UBIQ_ENCCU	5.640e-34	94.74	Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_074...	[more]
UBIQ_DICDI	5.640e-34	94.74	Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1...	[more]
UBIQ_PHYIN	1.641e-33	93.42	Ubiquitin OS=Phytophthora infestans PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS07_12A05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12A05-A10-1-7.g, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX043572 ID=CX043572; Name=CX043572; organism=Citrus sinensis; type=EST; length=717bp
AAAAAAAGAAACAAAAAAGATATTTAGTTTAGATACCGAGGCTCCCAATC
TCAGCCTTCCAACATGCAGATCTTTGTGAAAACTTTGACCGGCAAGACCA
TCACTCTCGAGGTGGAGAGCTCCGACACGATCGACAACGTCAAGGCTAAG
ATCCAGGACAAGGAAGGGATTCCACCGGACCAGCAGCGGCTGATCTTCGC
CGGAAAGCAGCTCGAGGACGGGCGCACCTTGGCGGATTACAACATCCAGA
AGGAGTCGACTCTCCACCTCGTCCTCCGTCTCCGCGGCGGCATGCAGATC
TTCGTCAAGACTCTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTC
CGACACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGGATCC
CCCCGGACCAGCAGAGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGC
CGCACCCTGGCCGATTATAACATCCAGAAGGAATCCACGCTCCACCTTGT
GTTGCGCCTGAGGGGAGGAATGCAGATCTTCGTCAAGACGTTGACCGGGA
AGACGATCACCCTGGAGGTGGAGAGCTCCGACACGATCGACAACGTGAAG
GCCAAGATCCAGGACAAAGAGGGGATTCCTCCGGACCAGCAGAGGCTCAT
CTTCGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCGCCGATTACAACA
TTCAAAAGGAGTCCACT