CV712871
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712871 vs. ExPASy Swiss-Prot
Match: PRP5_ASPTN (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=prp5 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.011e-11 Identity = 37/102 (36.27%), Postives = 58/102 (56.86%), Query Frame = -2 Query: 485 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRF-----KKLLQKADNDSCPIHSIPSSLIESLR 775 T++ F+ G VL+++ RG+DV+ + VVNYD P +++ Y+HRAGRT RAG G T L +D+ +RF K L Q P+ + S +E ++ Sbjct: 843 TIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQ-ERFSVDIAKALKQSGQKVPEPVQQMVDSFLEKVK 943
BLAST of CV712871 vs. ExPASy Swiss-Prot
Match: PRP5_ASPOR (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus oryzae GN=prp5 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.011e-11 Identity = 36/101 (35.64%), Postives = 57/101 (56.44%), Query Frame = -2 Query: 485 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE----VKRFKKLLQKADNDSCPIHSIPSSLIESLR 775 T++ F+ G VL+++ RG+DV+ + VVNYD P +++ Y+HRAGRT RAG G T L +D+ V K L Q + P+ + S +E ++ Sbjct: 848 TIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAKALKQSGQSVPEPVQKMVDSFLEKVK 948
BLAST of CV712871 vs. ExPASy Swiss-Prot
Match: DRS1_ASPTN (ATP-dependent RNA helicase drs1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=drs1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.011e-11 Identity = 36/120 (30.00%), Postives = 66/120 (55.00%), Query Frame = -2 Query: 422 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQ--KADNDSCPIHSIPSSLIESLRPVYKSALDKLKETVESEAHRK 775 +++ FR+GK+ L+++D +RG+D++GV V+NY+ P + Y+HR GRTARAG+ GR T+ + + K K ++ KA + ++ + +++ E +E E K Sbjct: 591 SVENFRDGKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKASKAQGAKVASRVVDPAVADQWAKKAADLEEEINEVLEEEKTEK 710
BLAST of CV712871 vs. ExPASy Swiss-Prot
Match: DEAD_BUCBP (Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=deaD PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.011e-11 Identity = 35/103 (33.98%), Postives = 63/103 (61.17%), Query Frame = -2 Query: 467 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSA 775 TL+ ++G++ +L+++D RG+DV+ ++ V+NYD P ++Y+HR GRT RAG+ G+ + E +R + +++A N S ++P S S R + K A Sbjct: 286 TLEKLKDGRLDILIATDVAARGLDVDRISFVINYDIPMDSESYVHRIGRTGRAGRKGKALLFVENRE-RRLLRNIERAMNISISEVNLPKSDFLSKRRLEKFA 387
BLAST of CV712871 vs. ExPASy Swiss-Prot
Match: DDX47_CAEEL (Putative ATP-dependent RNA helicase T26G10.1 OS=Caenorhabditis elegans GN=T26G10.1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.011e-11 Identity = 40/122 (32.79%), Postives = 69/122 (56.56%), Query Frame = -2 Query: 422 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKK----LLQKADNDSCPIHSIPSSLIESLRPVYKSALDKLKETVESEAHRK 775 +L F+ ++LV +D RG+D+ V+ V+NYD P+ K Y+HR GRTARAG+ G T++ + +V+ ++K L +K D C + + L+E + ++A ++KE E + K Sbjct: 325 SLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYDVEAYQKIEANLGKKLDEYKC-VENEVMVLVERTQEATENARIEMKEMDEKKKSGK 445
BLAST of CV712871 vs. ExPASy Swiss-Prot
Match: DBP5_USTMA (ATP-dependent RNA helicase DBP5 OS=Ustilago maydis GN=DBP5 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.011e-11 Identity = 38/113 (33.63%), Postives = 64/113 (56.64%), Query Frame = -2 Query: 455 TLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKP------AYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSALDKL 775 T+ AFR+GK +VL+S++ + RG+D++ V V+NYD P A +TY+HR GRT R G+ G +H + + ++KA C I + ++ +E + K AL ++ Sbjct: 344 TIDAFRDGKSKVLISTNVIARGIDIQQVTLVINYDMPLTQTGEADAETYLHRIGRTGRFGRKGVSINFVHDQQSWSYMDQIEKA--LKCQITRVATNDLEEMEYTIKEALKQI 454
BLAST of CV712871 vs. ExPASy Swiss-Prot
Match: CSHA_BACSU (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus subtilis GN=cshA PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.011e-11 Identity = 37/114 (32.46%), Postives = 58/114 (50.88%), Query Frame = -2 Query: 431 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSALDKLKETVESEA 772 L+ F+EG I+VLV++D RG+D+ GV +V N+D P ++Y+HR GRT RAG+ G T + E S++ ++ K +D++KE EA Sbjct: 284 LRKFKEGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPRE----------------------KSMLRAIEQTTKRKMDRMKEPTLDEA 375
BLAST of CV712871 vs. ExPASy Swiss-Prot
Match: YR458_MIMIV (Putative ATP-dependent RNA helicase R458 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R458 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.627e-11 Identity = 33/80 (41.25%), Postives = 54/80 (67.50%), Query Frame = -2 Query: 530 KAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDS 769 K F E KI++L+S+D +RG+DV+G+N V N+D P ++TYIHR GR+ R G+ G +L+ ++ K + +++ DN S Sbjct: 429 KDFVENKIRLLISTDLTSRGLDVQGINVVFNFDMPDTLETYIHRVGRSGRYGRKGVSISLILVNQNKNEMEKVEQIDNCS 508
BLAST of CV712871 vs. ExPASy Swiss-Prot
Match: ROK1_YEAST (ATP-dependent RNA helicase ROK1 OS=Saccharomyces cerevisiae GN=ROK1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.627e-11 Identity = 36/132 (27.27%), Postives = 67/132 (50.76%), Query Frame = -2 Query: 380 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSALDKLKETVES-EAHRKHTIGFKLSRMGKGR 772 ++ F+ G++ L+ +D + RG+D +GVN V+NYD P + Y+HR GRT R G+ G+ T K + K ++ C + + + R K KE++++ +AH++ + +M K + Sbjct: 415 IERFKTGELWCLICTDVLARGIDFKGVNLVINYDVPGSSQAYVHRIGRTGRGGRSGKAITFYTKQDSVAIKPIINVMKQSGCEVSEWMDKMAKMTR--------KEKESIKNGKAHKERKQITTVPKMDKAK 538
BLAST of CV712871 vs. ExPASy Swiss-Prot
Match: ROK1_YEAS7 (ATP-dependent RNA helicase ROK1 OS=Saccharomyces cerevisiae (strain YJM789) GN=ROK1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.627e-11 Identity = 36/132 (27.27%), Postives = 67/132 (50.76%), Query Frame = -2 Query: 380 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSALDKLKETVES-EAHRKHTIGFKLSRMGKGR 772 ++ F+ G++ L+ +D + RG+D +GVN V+NYD P + Y+HR GRT R G+ G+ T K + K ++ C + + + R K KE++++ +AH++ + +M K + Sbjct: 415 IERFKTGELWCLICTDVLARGIDFKGVNLVINYDVPGSSQAYVHRIGRTGRGGRSGKAITFYTKQDSVAIKPIINVMKQSGCEVSEWMDKMAKMTR--------KEKESIKNGKAHKERKQITTVPKMDKAK 538 The following BLAST results are available for this feature:
BLAST of CV712871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 168
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712871 ID=CV712871; Name=CV712871; organism=Citrus sinensis; type=EST; length=776bpback to top |