CV712848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712848 vs. ExPASy Swiss-Prot
Match: ISPH_PROMT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain NATL2A) GN=ispH PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 1.729e-15 Identity = 32/66 (48.48%), Postives = 47/66 (71.21%), Query Frame = -1 Query: 298 QERQDAMY*LVEEKIDLILLVGRWNSSTTSSLQKIAEDRGISSYWIDSEKRIG-PGNKIAHKLMHG 492 +ERQ AM+ LV+E +DL++++G +NSS T+ LQ+IA RGI S+ ID+ +RIG N I H + G Sbjct: 292 EERQGAMFSLVDEPLDLMVVIGGFNSSNTTHLQEIAISRGIRSFHIDTPERIGEETNTITHMPLEG 357 HSP 2 Score: 42.743 bits (99), Expect = 1.729e-15 Identity = 17/35 (48.57%), Postives = 28/35 (80.00%), Query Frame = -3 Query: 182 EKNWLPKGQITIGVTAGASIPDKAVENVLKKVFEI 286 E+N+L G I++G+T+GAS PD+ VE+V+ K+ +I Sbjct: 363 EENFLQNGNISVGITSGASTPDRVVEDVIHKLMKI 397
BLAST of CV712848 vs. ExPASy Swiss-Prot
Match: ISPH_PROM1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain NATL1A) GN=ispH PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 1.729e-15 Identity = 32/66 (48.48%), Postives = 47/66 (71.21%), Query Frame = -1 Query: 298 QERQDAMY*LVEEKIDLILLVGRWNSSTTSSLQKIAEDRGISSYWIDSEKRIG-PGNKIAHKLMHG 492 +ERQ AM+ LV+E +DL++++G +NSS T+ LQ+IA RGI S+ ID+ +RIG N I H + G Sbjct: 292 EERQGAMFSLVDEPLDLMVVIGGFNSSNTTHLQEIAISRGIRSFHIDTPERIGEETNTITHMPLEG 357 HSP 2 Score: 42.743 bits (99), Expect = 1.729e-15 Identity = 17/35 (48.57%), Postives = 28/35 (80.00%), Query Frame = -3 Query: 182 EKNWLPKGQITIGVTAGASIPDKAVENVLKKVFEI 286 E+N+L G I++G+T+GAS PD+ VE+V+ K+ +I Sbjct: 363 EENFLQNGNISVGITSGASTPDRVVEDVIHKLMKI 397
BLAST of CV712848 vs. ExPASy Swiss-Prot
Match: ISPH_PROM9 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9312) GN=ispH PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 3.084e-14 Identity = 29/62 (46.77%), Postives = 46/62 (74.19%), Query Frame = -1 Query: 310 QERQDAMY*LVEEKIDLILLVGRWNSSTTSSLQKIAEDRGISSYWIDSEKRIG-PGNKIAHK 492 +ERQDAM+ LV+E +D+++++G +NSS T+ LQ+IA + I+S+ ID+ +RI N I HK Sbjct: 292 EERQDAMFSLVDEDLDILVVIGGFNSSNTTHLQEIAITKNITSFHIDTPERISVEENSILHK 353 HSP 2 Score: 41.2022 bits (95), Expect = 3.084e-14 Identity = 16/32 (50.00%), Postives = 25/32 (78.12%), Query Frame = -3 Query: 191 EKNWLPKGQITIGVTAGASIPDKAVENVLKKV 286 + N+LP G I +G+T+GAS PDK V +V++K+ Sbjct: 362 KNNFLPSGNINVGITSGASTPDKVVADVIEKL 393 The following BLAST results are available for this feature:
BLAST of CV712848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712848 ID=CV712848; Name=CV712848; organism=Citrus sinensis; type=EST; length=834bpback to top |