CV712838

Overview
NameCV712838
Unique NameCV712838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712838 vs. ExPASy Swiss-Prot
Match: G6PD_DROYA (Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Drosophila yakuba GN=Zw PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.220e-15
Identity = 39/112 (34.82%), Postives = 67/112 (59.82%), Query Frame = 3
Query:  312 RVEIHIQFRHVPGNIYHESFGHNIDLATNELILRDVLDEAIPVRVNNKVPGLSLQLDASELNLLYKAKYNVE-VPDSYEHLLLDVVNGDNHLFMKSDELTAAWNILNPVLQE 644
            + E+ IQ++ VPG+I+  +         NEL++R    EA+  ++  K PG++  ++ +EL+L Y+ +Y    +PD+YE L+LDV  G    F++SD+L  AW I  P+L +
Sbjct:  365 KAEVRIQYQDVPGDIFEGN------TKRNELVIRVQPGEALYFKMMTKSPGITFDIEETELDLTYEHRYKDSYLPDAYERLILDVFCGSQMHFVRSDQLREAWRIFTPILHQ 470          

HSP 2 Score: 25.0238 bits (53), Expect = 4.220e-15
Identity = 10/25 (40.00%), Postives = 14/25 (56.00%), Query Frame = 2
Query:  623 FKPSFTGIDKNNIAPELYELGGRGP 697
            F P    I++ +I P  Y+ G RGP
Sbjct:  464 FTPILHQIEREHIRPITYQYGSRGP 488          
BLAST of CV712838 vs. ExPASy Swiss-Prot
Match: G6PD6_ARATH (Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 2 OS=Arabidopsis thaliana GN=ACG12 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.485e-15
Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 3
Query:  312 RVEIHIQFRHVPGNIYHESFGHNIDLATNELILRDVLDEAIPVRVNNKVPGLSLQLDASELNLLYKAKYN-VEVPDSYEHLLLDVVNGDNHLFMKSDELTAAWNILNPVL 638
            + EI IQF+ VPG+I+            NE ++R    EA+ +++  K PGL +    SEL+L Y  +Y  V +P++YE L+LD + GD   F++ DEL  AW I  P+L
Sbjct:  366 KAEIRIQFKDVPGDIFRCQ-----KQGRNEFVIRLQPSEAMYMKLTVKQPGLDMNTVQSELDLSYGQRYQGVAIPEAYERLILDTIKGDQQHFVRRDELKVAWEIFTPLL 470          

HSP 2 Score: 23.483 bits (49), Expect = 5.485e-15
Identity = 11/27 (40.74%), Postives = 13/27 (48.15%), Query Frame = 2
Query:  617 EYFKPSFTGIDKNNIAPELYELGGRGP 697
            E F P    IDK  +    Y+ G RGP
Sbjct:  464 EIFTPLLHRIDKGEVKSIPYKPGSRGP 490          
BLAST of CV712838 vs. ExPASy Swiss-Prot
Match: G6PD_CAEEL (Glucose-6-phosphate 1-dehydrogenase OS=Caenorhabditis elegans GN=gspd-1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.016e-14
Identity = 42/112 (37.50%), Postives = 69/112 (61.61%), Query Frame = 3
Query:  312 RVEIHIQFRHVPGNIYHESFGHNIDLATNELILRDVLDEAIPVRVNNKVPGLSLQLDASELNLLYKAKYN-VEVPDSYEHLLLDVVNGDNHLFMKSDELTAAWNILNPVLQE 644
            + E+ IQF+ V G+IY        +L  +EL++R   +EA+ +++  K PG+   ++ +EL+L Y  ++  V +PD+YE L L+V  G    F+++DEL  AW IL PVL+E
Sbjct:  373 KAEVRIQFKEVSGDIYPSG-----ELKRSELVMRVQPNEAVYMKLMTKKPGMGFGVEETELDLTYNNRFKEVRLPDAYERLFLEVFMGSQINFVRTDELEYAWRILTPVLEE 479          
BLAST of CV712838 vs. ExPASy Swiss-Prot
Match: G6PD_DROME (Glucose-6-phosphate 1-dehydrogenase OS=Drosophila melanogaster GN=Zw PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.203e-14
Identity = 39/112 (34.82%), Postives = 66/112 (58.93%), Query Frame = 3
Query:  312 RVEIHIQFRHVPGNIYHESFGHNIDLATNELILRDVLDEAIPVRVNNKVPGLSLQLDASELNLLYKAKYNVE-VPDSYEHLLLDVVNGDNHLFMKSDELTAAWNILNPVLQE 644
            + E+ IQ++ V G+I+  +         NEL++R    EA+  ++  K PG++  ++ +EL+L Y+ +Y    +PD+YE L+LDV  G    F++SDEL  AW I  P+L +
Sbjct:  371 KAEVRIQYQDVLGDIFEGN------TKRNELVIRVQPGEALYFKMMTKSPGITFDIEETELDLTYEHRYKDSYLPDAYERLILDVFCGSQMHFVRSDELREAWRIFTPILHQ 476          

HSP 2 Score: 26.1794 bits (56), Expect = 1.203e-14
Identity = 11/25 (44.00%), Postives = 14/25 (56.00%), Query Frame = 2
Query:  623 FKPSFTGIDKNNIAPELYELGGRGP 697
            F P    I+K +I P  Y+ G RGP
Sbjct:  470 FTPILHQIEKEHIRPITYQYGSRGP 494          
BLAST of CV712838 vs. ExPASy Swiss-Prot
Match: G6PD2_MOUSE (Glucose-6-phosphate 1-dehydrogenase 2 OS=Mus musculus GN=G6pd2 PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.203e-14
Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = 3
Query:  312 RVEIHIQFRHVPGNIYHESFGHNIDLATNELILRDVLDEAIPVRVNNKVPGLSLQLDASELNLLYKAKY-NVEVPDSYEHLLLDVVNGDNHLFMKSDELTAAWNILNPVLQE 644
            + E+ +QFR +PG+I+H+          NEL++R   +EA+   +  K PG+    + SEL+L Y  KY NV++P +YE L+LDV  G    F+++DEL   W I  P+L +
Sbjct:  366 KAEVRLQFRDIPGDIFHQK------CKRNELVIRMQPNEAVYTTMMTKKPGMFFNPEESELDLTYGNKYKNVKLPGAYERLILDVFCGCQMHFVRTDELREGWRIFTPLLHK 471          

HSP 2 Score: 20.4014 bits (41), Expect = 1.203e-14
Identity = 10/28 (35.71%), Postives = 12/28 (42.86%), Query Frame = 2
Query:  623 FKPSFTGIDKNNIAPELYELGGRGPVGA 706
            F P    I++    P  Y  G RGP  A
Sbjct:  465 FTPLLHKIEREKPQPFPYVYGSRGPTEA 492          
BLAST of CV712838 vs. ExPASy Swiss-Prot
Match: G6PD_MACRO (Glucose-6-phosphate 1-dehydrogenase OS=Macropus robustus GN=G6PD PE=2 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 1.563e-14
Identity = 42/110 (38.18%), Postives = 65/110 (59.09%), Query Frame = 3
Query:  312 RVEIHIQFRHVPGNIYHESFGHNIDLATNELILRDVLDEAIPVRVNNKVPGLSLQLDASELNLLYKAKY-NVEVPDSYEHLLLDVVNGDNHLFMKSDELTAAWNILNPVL 638
            + E+ +QFR V G+I+            NEL++R   +EA+  ++  K PG+    + SEL+L Y  +Y +V++PD+YE L+LDV  G    F++SDEL  AW I  P+L
Sbjct:  366 KAEVRLQFRDVAGDIFQRQ------CKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESELDLTYGNRYKDVKLPDAYERLILDVFCGSQMHFVRSDELREAWRIFTPLL 469          

HSP 2 Score: 22.3274 bits (46), Expect = 1.563e-14
Identity = 10/25 (40.00%), Postives = 11/25 (44.00%), Query Frame = 2
Query:  623 FKPSFTGIDKNNIAPELYELGGRGP 697
            F P    I+K    P  Y  G RGP
Sbjct:  465 FTPLLHHIEKEKTQPIAYVYGSRGP 489          
BLAST of CV712838 vs. ExPASy Swiss-Prot
Match: G6PD_KLULA (Glucose-6-phosphate 1-dehydrogenase OS=Kluyveromyces lactis GN=ZWF PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.861e-14
Identity = 41/110 (37.27%), Postives = 66/110 (60.00%), Query Frame = 3
Query:  312 RVEIHIQFRHVPGNIYHESFGHNIDLATNELILRDVLDEAIPVRVNNKVPGLSLQLDASELNLLYKAKY-NVEVPDSYEHLLLDVVNGDNHLFMKSDELTAAWNILNPVL 638
            +VEI IQFR V   ++        D+  NEL++R   +EAI ++ N K PGL+ +   +EL+L Y  +Y N  +P++YE L+ D + GD+  F++ DEL  +W +  P+L
Sbjct:  345 KVEIRIQFRRVASGMF-------TDIPNNELVIRIQPNEAIYLKCNAKTPGLANENQTTELDLTYSERYKNYWIPEAYESLIRDALLGDHSNFVRDDELDVSWKLFTPLL 447          
BLAST of CV712838 vs. ExPASy Swiss-Prot
Match: G6PD_YEAST (Glucose-6-phosphate 1-dehydrogenase OS=Saccharomyces cerevisiae GN=ZWF1 PE=1 SV=4)

HSP 1 Score: 74.7146 bits (182), Expect = 7.519e-14
Identity = 38/111 (34.23%), Postives = 66/111 (59.46%), Query Frame = 3
Query:  312 RVEIHIQFRHVPGNIYHESFGHNIDLATNELILRDVLDEAIPVRVNNKVPGLSLQLDASELNLLYKAKY-NVEVPDSYEHLLLDVVNGDNHLFMKSDELTAAWNILNPVLQ 641
            +VEI +Q++ V   ++        D+  NEL++R   D A+ ++ N K PGLS     ++LNL Y ++Y +  +P++YE L+ D + GD+  F++ DEL  +W I  P+L+
Sbjct:  349 KVEIRLQYKAVASGVFK-------DIPNNELVIRVQPDAAVYLKFNAKTPGLSNATQVTDLNLTYASRYQDFWIPEAYEVLIRDALLGDHSNFVRDDELDISWGIFTPLLK 452          

HSP 2 Score: 23.0978 bits (48), Expect = 7.519e-14
Identity = 11/28 (39.29%), Postives = 15/28 (53.57%), Query Frame = 2
Query:  623 FKPSFTGIDK-NNIAPELYELGGRGPVG 703
            F P    I++ +   PE+Y  G RGP G
Sbjct:  447 FTPLLKHIERPDGPTPEIYPYGSRGPKG 474          
BLAST of CV712838 vs. ExPASy Swiss-Prot
Match: G6PD_PICJA (Glucose-6-phosphate 1-dehydrogenase OS=Pichia jadinii PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13
Identity = 36/112 (32.14%), Postives = 69/112 (61.61%), Query Frame = 3
Query:  312 RVEIHIQFRHVPGNIYHESFGHNIDLATNELILRDVLDEAIPVRVNNKVPGLSLQLDASELNLLYKAKYNVE--VPDSYEHLLLDVVNGDNHLFMKSDELTAAWNILNPVLQ 641
            + EI IQF+ V   ++ E       +  NEL++R   +EAI +++N+K+PG+S +   ++L+L Y  +Y+ +  +P++YE L+ D   G++  F++ DEL  +W +  P+L+
Sbjct:  341 KAEIRIQFKPVAKGMFKE-------IQRNELVIRIQPNEAIYLKINSKIPGISTETSLTDLDLTYSTRYSKDFWIPEAYEALIRDCYLGNHSNFVRDDELEVSWKLFTPLLE 445          
BLAST of CV712838 vs. ExPASy Swiss-Prot
Match: G6PD_SYNY3 (Glucose-6-phosphate 1-dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=zwf PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 41/107 (38.32%), Postives = 60/107 (56.07%), Query Frame = 3
Query:  318 EIHIQFRHVPGNIYHESFGHNIDLATNELILRDVLDEAIPVRVNNKVPGLSLQLDASELNLLYKAKYNVEVPDSYEHLLLDVVNGDNHLFMKSDELTAAWNILNPVL 638
            EI IQFR VP  I+ +S  H  +   N L LR   +E I +R   K+PG  L+    +++  Y + + V   D+Y  LLLD + GD  LF ++DE+  AW ++ PVL
Sbjct:  367 EIAIQFRQVPLLIF-QSVAHQAN--PNVLSLRIQPNEGISLRFEAKMPGSELRTRTVDMDFSYGSSFGVAAADAYHRLLLDCMLGDQTLFTRADEVEEAWRVVTPVL 470          
The following BLAST results are available for this feature:
BLAST of CV712838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
G6PD_DROYA4.220e-1534.82Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=... [more]
G6PD6_ARATH5.485e-1538.18Glucose-6-phosphate 1-dehydrogenase, cytoplasmic i... [more]
G6PD_CAEEL1.016e-1437.50Glucose-6-phosphate 1-dehydrogenase OS=Caenorhabdi... [more]
G6PD_DROME1.203e-1434.82Glucose-6-phosphate 1-dehydrogenase OS=Drosophila ... [more]
G6PD2_MOUSE1.203e-1437.50Glucose-6-phosphate 1-dehydrogenase 2 OS=Mus muscu... [more]
G6PD_MACRO1.563e-1438.18Glucose-6-phosphate 1-dehydrogenase OS=Macropus ro... [more]
G6PD_KLULA3.861e-1437.27Glucose-6-phosphate 1-dehydrogenase OS=Kluyveromyc... [more]
G6PD_YEAST7.519e-1434.23Glucose-6-phosphate 1-dehydrogenase OS=Saccharomyc... [more]
G6PD_PICJA5.576e-1332.14Glucose-6-phosphate 1-dehydrogenase OS=Pichia jadi... [more]
G6PD_SYNY31.373e-1138.32Glucose-6-phosphate 1-dehydrogenase OS=Synechocyst... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001P12_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001P12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712838 ID=CV712838; Name=CV712838; organism=Citrus sinensis; type=EST; length=725bp
GTTTTTAGGTCAATCTGCAGATTGGAGCCATGCAATGTCATTCTTGGCCA
TTATAAAGATACTTCTGGTGACAAGGTTGATGTTAAATTGAACAGCCTGA
CCCCCACATATTTTGCTGCTGCATGCATTATACATTGGCAATGCACGTTG
GGATGGCGTGCCTTTTGTAATAAAAGCTAGCATGGGCTAATCAAACACAG
GTAATAGCTATTTCAGTTTTGCTGTTTATGCCTTAATAGACATTTTCGTG
GTTTGTACATTGCCAGATTATGATAGGAACCTAGAGCACACCCTTAAAAA
GATGGCTTGTGAGAGTGGAGATACATATACAGTTTCGACATGTTCCGGGG
AACATCTATCATGAAAGTTTTGGGCATAACATCGACCTTGCCACAAATGA
ACTAATATTACGCGATGTGCTTGATGAGGCCATTCCAGTCAGAGTCAACA
ATAAAGTTCCAGGATTAAGCTTGCAATTGGATGCTTCGGAGCTTAATTTG
CTCTATAAGGCTAAGTATAACGTGGAGGTGCCTGATTCATACGAACATCT
TCTTCTTGATGTTGTCAATGGCGACAACCATCTCTTCATGAAAAGCGATG
AGCTTACTGCTGCATGGAATATTTTAAACCCAGTTTTACAGGAATAGACA
AGAACAATATTGCACCAGAACTTTATGAGCTGGGTGGTAGAGGTCCCGTT
GGAGCATATTATCTTTAGGCGAAAC
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