CV712816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCP1_DICGR (Mitochondrial brown fat uncoupling protein 1 OS=Dicrostonyx groenlandicus GN=UCP1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.078e-22 Identity = 80/256 (31.25%), Postives = 126/256 (49.22%), Query Frame = 1 Query: 1 PIDMIKVRIQL---GQGSA--------GTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVAD-EGVLALWKGAGPTVVRAMALNMGMLASYD-QSVEFFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIA 729 P+D KVR+Q+ GQ S+ GT+T T+ K EG+ Y GL AG+ RQ ++ + R+G + + + + P L + GL G + +G P ++ +R+QA + L + R YT + A YRI+A E LWKG P ++R + +N L +YD + ++P + ++ V+GF + + P D VKT+ P G+YP S CAM L GP F+ GF +R+A Sbjct: 33 PLDTAKVRLQIQGEGQTSSTIRYKGVLGTIT-TLAKTEGWPKLYSGLPAGIQRQISFASLRIGLYDTV-QEYFSSGKETPPTLGNRISAGLMTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPR-YTGTYNA-YRIIATTESFSTLWKGTTPNLMRNVIINRTELVTYDLMKGALVNNQILADDVPCHLLSALVAGFCTTFLASPADVVKTRFINSLP---GQYPSVPS--CAMTMLTKEGPTAFFKGFVPSFLRLA 279
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCP2_RAT (Mitochondrial uncoupling protein 2 OS=Rattus norvegicus GN=Ucp2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.407e-22 Identity = 78/250 (31.20%), Postives = 116/250 (46.40%), Query Frame = 1 Query: 1 PIDMIKVRIQL---GQGSAGTVTK-----------TMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLS-ELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGF 705 P+D KVR+Q+ QG A T TM++ EG + Y GL AGL RQ ++ + R+G + + K + + + L G T GA+ +V P D+ +R QA A A R Y + +A I +EG+ LWKG P V R +N L +YD + A ++ +LP ++ +GF + + P D VKT+ A G+Y G CA+ L+ GP FY GF Sbjct: 33 PLDTAKVRLQIQGESQGLARTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSV--KQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQAR--AGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCTELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMN---SALGQYHSAG--HCALTMLRKEGPRAFYKGF 273
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCP1_PHOSU (Mitochondrial brown fat uncoupling protein 1 OS=Phodopus sungorus GN=UCP1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.407e-22 Identity = 79/256 (30.86%), Postives = 125/256 (48.83%), Query Frame = 1 Query: 1 PIDMIKVRIQL---GQGSA--------GTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVAD-EGVLALWKGAGPTVVRAMALNMGMLASYD-QSVEFFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIA 729 P+D KVR+Q+ GQ S+ GT+T T+ K EG Y GL AG+ RQ ++ + R+G + + + + P L + GL G + +G P ++ +R+QA + L + R YT + A YRI+A E + LWKG P ++R + +N L +YD + ++P + ++ V+GF + + P D VKT+ P G+YP S CAM GP F+ GF +R+A Sbjct: 33 PLDTAKVRLQIQGEGQTSSTIRYKGVLGTIT-TLAKTEGLPKLYSGLPAGIQRQISFASLRIGLYDTV-QEYFSSGKETPPTLVNRISAGLMTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPR-YTGTYNA-YRIIATTESLSTLWKGTTPNLLRNVIINCTELVTYDLMKGALVNNQILADDVPCHLLSALVAGFCTTFLASPADVVKTRFINSLP---GQYPSVPS--CAMTMFTKEGPTAFFKGFVPSFLRLA 279
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCP1_SUNMU (Mitochondrial brown fat uncoupling protein 1 OS=Suncus murinus GN=UCP1 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.838e-22 Identity = 77/247 (31.17%), Postives = 120/247 (48.58%), Query Frame = 1 Query: 1 PIDMIKVRIQLG-----------QGSAGTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVE-FFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGF 705 P+D KVR+Q+ +G GT+ T+ K EG Y GL AG+ RQ ++ + R+G + + + A+ P L K GL G + +G P ++A +RMQA ++L + R Y+ + A Y IV EG L LWKG + R + +N L YD E ++ ++P + A+ +GF +A + P D VKT+ P G YP+ +CA+ L+ G F+ GF Sbjct: 34 PLDTAKVRLQVQGERPNAPGVKYKGVLGTIA-TVAKTEGPLKLYGGLPAGIQRQISFASLRIGLYDTV-QEYFNAHRKTPATLGNKISAGLMTGCVTVFIGQPTEVAKVRMQAQSSLHWLKPR-YSGTYNAYYVIVKTEGFLGLWKGTSLNLTRNVIINCTELVVYDVLKEALVKNNVLADDIPCHLLAALTAGFCTTALASPVDVVKTRFINSPP---GYYPHV--HNCALNMLQKEGLRAFFKGF 272
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCP2_DANRE (Mitochondrial uncoupling protein 2 OS=Danio rerio GN=ucp2 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.401e-22 Identity = 73/251 (29.08%), Postives = 120/251 (47.81%), Query Frame = 1 Query: 1 PIDMIKVRIQL-GQGSAGT--------------VTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVE-FFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGF 705 P+D KVR+Q+ G+ A T TM++ EG + Y GL AGL RQ ++ + R+G + + + +D + + + G T GA+ +V P D+ +R QA + A++R Y + A I +EG LWKG GP + R +N L +YD + + + +LP ++ +GF + + P D VKT+ AQG+ Y+ +++CA+ L GP F+ GF Sbjct: 33 PLDTAKVRLQIQGENKASTNMGRGPVKYRGVFGTISTMVRVEGPRSLYSGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSDHAGIG--SRLMAGCTTGAMAVAVAQPTDVLKVRFQAQVSAGASKR--YHSTMDAYRTIAKEEGFRGLWKGTGPNITRNAIVNCTELVTYDLIKDALLKSSLMTDDLPCHFTSAFGAGFCTTIIASPVDVVKTRYMN---SAQGQ--YSSALNCAVAMLTKKGPKAFFKGF 274
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCP1_MESAU (Mitochondrial brown fat uncoupling protein 1 OS=Mesocricetus auratus GN=UCP1 PE=1 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 2.401e-22 Identity = 80/256 (31.25%), Postives = 124/256 (48.44%), Query Frame = 1 Query: 1 PIDMIKVRIQL---GQ--------GSAGTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVAD-EGVLALWKGAGPTVVRAMALNMGMLASYD-QSVEFFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIA 729 P+D KVR+Q+ GQ G GT+T T+ K EG Y GL AG+ RQ ++ + R+G + + + + P L + GL G + +G P ++ +R+QA + L + R YT + A YRI+A E LWKG P ++R + +N L +YD + ++P + ++ V+GF + + P D VKT+ P G+YP S CAM L GP F+ GF +R+A Sbjct: 33 PLDTAKVRLQIQGEGQISSTIRYKGVLGTIT-TLAKTEGLPKLYSGLPAGIQRQISFASLRIGLYDTV-QEYFSSGKETPPTLGNRISAGLMTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPR-YTGTYNA-YRIIATTESFSTLWKGTTPNLLRNVIINCVELVTYDLMKGALVNNQILADDVPCHLLSAFVAGFCTTFLASPADVVKTRFINSLP---GQYPSVPS--CAMTMLTKEGPTAFFKGFVPSFLRLA 279
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCP3_BOVIN (Mitochondrial uncoupling protein 3 OS=Bos taurus GN=UCP3 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.135e-22 Identity = 77/261 (29.50%), Postives = 116/261 (44.44%), Query Frame = 1 Query: 1 PIDMIKVRIQLG--------------QGSAGTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSF----RILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSE-LPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRI 726 P+D KVR+Q+ +G GT+ TM++ EG + Y GL AGL RQ ++ + R+G + + T K + + + + L G T GA+ + P D+ IR QA R Y+ A I +EGV LWKG P + R +N G + +YD E D L++ P ++ +GF A+ + P D VKT+ P Y DC +K + GP FY GF +R+ Sbjct: 33 PLDTAKVRLQIQGENQAALAARSAQYRGVLGTIL-TMVRTEGPRSLYSGLVAGLQRQMSFASIRIGLYDSVKQFYTPKGSDHSS-----IITRILAGCTTGAMAVTCAQPTDVVKIRFQASMHTGLGGNRKYSGTMDAYRTIAREEGVRGLWKGILPNITRNAIVNCGEMVTYDIIKEKLLDYHLLTDNFPCHFVSAFGAGFCATLVASPVDVVKTRYMNSPPG-----QYHSPFDCMLKMVTQEGPTAFYKGFTPSFLRL 282
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCP2_BOVIN (Mitochondrial uncoupling protein 2 OS=Bos taurus GN=UCP2 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.135e-22 Identity = 77/251 (30.68%), Postives = 117/251 (46.61%), Query Frame = 1 Query: 1 PIDMIKVRIQLG---------------QGSAGTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLS-ELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGF 705 P+D KVR+Q+ +G GT+ TM++ EG + Y GL AGL RQ ++ + R+G + + K + + + L G T GA+ +V P D+ +R QA A A +R Y + +A I +EG LWKG P V R +N L +YD + A ++ +LP ++ +GF + + P D VKT+ A G+Y G CA+ L+ GP FY GF Sbjct: 33 PLDTAKVRLQIQGERQGPMQAAASAQYRGVLGTIL-TMVRTEGPRSLYSGLVAGLQRQMSFASVRIGLYDSV--KQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGAGRR--YQSTVEAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKAHLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMN---SALGQYSSAG--HCALTMLQKEGPQAFYKGF 273
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCP1_BOVIN (Mitochondrial brown fat uncoupling protein 1 (Fragment) OS=Bos taurus GN=UCP1 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 3.135e-22 Identity = 77/248 (31.05%), Postives = 114/248 (45.97%), Query Frame = 1 Query: 1 PIDMIKVRIQLG-----------QGSAGTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVAD-EGVLALWKGAGPTVVRAMALNMGMLASYDQSVE-FFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGF 705 P+D KVR+Q+ +G GT+ T+ K EG Y GL AGL RQ + + R+G + + GK L K GL G + +G P ++ +R+QA + L + R YT + A YRI+A EG+ LWKG P + + +N L +YD E ++ ++P ++ V+GF + S P D VKT+ P P +CAM L GP F+ GF Sbjct: 17 PLDTAKVRLQIQGECLISSAIRYKGVLGTII-TLAKTEGPVKLYSGLPAGLQRQISLASLRIGLYDTVQEFF---TTGKEASLGSKISAGLMTGGVAVFIGQPTEVVKVRLQAQSHLHGPKPR-YTGTYNA-YRIIATTEGLTGLWKGTSPNLTTNVIINCTELVTYDLMKEALVKNKLLADDVPCHFVSAVVAGFCTTVLSSPVDVVKTRFVNSSPGQNTSVP-----NCAMMMLTREGPSAFFKGF 253
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCP3_HUMAN (Mitochondrial uncoupling protein 3 OS=Homo sapiens GN=UCP3 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.095e-22 Identity = 78/262 (29.77%), Postives = 121/262 (46.18%), Query Frame = 1 Query: 1 PIDMIKVRIQLG--------------QGSAGTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSF----RILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATL-PAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSE-LPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRI 726 P+D KVR+Q+ +G GT+ TM++ EG + Y GL AGL RQ ++ + R+G + ++ T K + + L + L G T GA+ + P D+ +R QA L P+ R Y+ A I +EGV LWKG P ++R +N + +YD E D L++ P ++ +GF A+ + P D VKT+ P Y +DC +K + GP FY GF +R+ Sbjct: 33 PLDTAKVRLQIQGENQAVQTARLVQYRGVLGTIL-TMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSS-----LTTRILAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWKGTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDVVKTRYMNSPPG-----QYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRL 283 The following BLAST results are available for this feature:
BLAST of CV712816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712816 ID=CV712816; Name=CV712816; organism=Citrus sinensis; type=EST; length=749bpback to top |