CV712816

Overview
NameCV712816
Unique NameCV712816
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCP2_HUMAN (Mitochondrial uncoupling protein 2 OS=Homo sapiens GN=UCP2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.095e-22
Identity = 77/250 (30.80%), Postives = 113/250 (45.20%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVTKT--------------MLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLS-ELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGF 705
            P+D  KVR+Q+   S G V  T              M++ EG  + Y GL AGL RQ ++ + R+G +  +  K       +   +  + L G T GA+  +V  P D+  +R QA A   A   R Y +   A   I  +EG   LWKG  P V R   +N   L +YD   +    A  ++ +LP    ++  +GF  +  + P D VKT+       A G+Y   G   CA+  L+  GP  FY GF
Sbjct:   33 PLDTAKVRLQIQGESQGPVRATASAQYRGVMGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSV--KQFYTKGSEHASIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQAR--AGGGRRYQSTVNAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMN---SALGQYSSAG--HCALTMLQKEGPRAFYKGF 273          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCP2_PONAB (Mitochondrial uncoupling protein 2 OS=Pongo abelii GN=UCP2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22
Identity = 77/250 (30.80%), Postives = 113/250 (45.20%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVTKT--------------MLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLS-ELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGF 705
            P+D  KVR+Q+   S G V  T              M++ EG  + Y GL AGL RQ ++ + R+G +  +  K       +   +  + L G T GA+  +V  P D+  +R QA A   A   R Y +   A   I  +EG   LWKG  P V R   +N   L +YD   +    A  ++ +LP    ++  +GF  +  + P D VKT+       A G+Y   G   CA+  L+  GP  FY GF
Sbjct:   33 PLDTAKVRLQIQGESQGPVHATASAQYRGVMGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSV--KQFYTKGSEHASIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQAR--AGGGRRYQSTVNAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMN---SALGQYSSAG--HCALTMLQKEGPRAFYKGF 273          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCP2_CANFA (Mitochondrial uncoupling protein 2 OS=Canis familiaris GN=UCP2 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.191e-21
Identity = 76/250 (30.40%), Postives = 112/250 (44.80%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVTK--------------TMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLS-ELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGF 705
            P+D  KVR+Q+     G V                TM++ EG  + Y GL AGL RQ ++ + R+G +  +  K       +   +  + L G T GA+  +V  P D+  +R QA A   A   R Y +   A   I  +EG   LWKG  P V R   +N   L +YD   +    A  ++ +LP    ++  +GF  +  + P D VKT+       A G+Y   G   CA+  L+  GP  FY GF
Sbjct:   33 PLDTAKVRLQIQGERQGPVRAAASAQYRGVLCTILTMVRTEGPRSLYSGLVAGLQRQMSFASVRIGLYDSV--KQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQAR--AGSGRRYQSTVDAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMN---SALGQYSSAG--HCALTMLQKEGPRAFYKGF 273          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCPA_DICDI (Mitochondrial substrate carrier family protein ucpA OS=Dictyostelium discoideum GN=ucpA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.556e-21
Identity = 82/264 (31.06%), Postives = 120/264 (45.45%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGS----------AGTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQ-ADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQS----VEFFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMT 747
            PI+++K R+QL QG                K + K EG      GL      QAT    RLGSF +++N A+ A   +     +  L G TAGAIGA+ GSP DL  +RMQ A+      Q   Y+++F A  +I+  EG   L +G   +  R    +   L++Y       + F  D      +   I +S V+GF  +    PFD  +T++            Y G MDC  KT+K  G    Y GF  + +R+ PH ++T
Sbjct:   35 PIELVKTRLQL-QGELQLSQRIYNGVWDAFKQIYKTEGIRGLQSGLIPAYFSQATMQGIRLGSFDLISN-ALGAKPNQDYFFLKNLLAGATAGAIGAAAGSPFDLVKVRMQAANMYKNDPQFVGYSSSFAAFKQIIQKEGFKGLTRGMLTSAQRTAVGSAIQLSTYGSCKNLVLNFVDDG-----IYAYIISSMVAGFIVTFGMNPFDVARTRLYFQGKGNSHGEIYKGLMDCVYKTVKKEGFGAVYKGFWAHYLRLGPHTILT 291          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCP2_CYPCA (Mitochondrial uncoupling protein 2 OS=Cyprinus carpio GN=ucp2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.556e-21
Identity = 71/252 (28.17%), Postives = 116/252 (46.03%), Query Frame = 1
Query:    1 PIDMIKVRIQLG----------------QGSAGTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVE-FFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGF 705
            P+D  KVR+Q+                 +G  GT++ TM++ EG  + Y GL AGL RQ ++ + R+G +  +  K       + + +  + + G T GA+  ++  P D+  +R QA  +  A +R  Y     A   I  +EG   LWKG GP + R   +N   L +YD   +   + +    +LP    ++  +GF  +  + P D VKT+     P       Y  +++CA+  L   GP  FY GF
Sbjct:   33 PLDTAKVRLQIQGESKIPVNTGHGPVKYRGVFGTIS-TMVRVEGPRSLYSGLVAGLQRQMSFASVRIGLYDSV--KQFYTKGSEHVGIGSRLMAGCTTGAMAVALAQPTDVVKVRFQAQNSAGANKR--YHGTMDAYRTIAKEEGFRGLWKGTGPNITRNAIVNCTELVTYDLIKDALLKSSLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAPG-----QYCSALNCAVAMLTKEGPKAFYKGF 274          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCP1_RABIT (Mitochondrial brown fat uncoupling protein 1 OS=Oryctolagus cuniculus GN=UCP1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.556e-21
Identity = 77/249 (30.92%), Postives = 117/249 (46.99%), Query Frame = 1
Query:    1 PIDMIKVRIQLG-----------QGSAGTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLP-LYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVAD-EGVLALWKGAGPTVVRAMALNMGMLASYD-QSVEFFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGF 705
            P+D  KVR Q+            +G  GT+T T+ K EG    Y GL AGL RQ ++ + R+G +  +         G+  P L  K   GLT G +   +G P ++  +R+QA + L   + R YT  + A YRI+A  E + +LWKG  P ++R + +N   L +YD       R+     ++P    ++ ++GF  +  S P D VKT+     P      P     +CAM      GP  F+ GF
Sbjct:   33 PLDTAKVRQQIQGEFPITSGIRYKGVLGTIT-TLAKTEGPLKLYSGLPAGLQRQISFASLRIGLYDTVQEFF---TSGEETPSLGSKISAGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGLKPR-YTGTYNA-YRIIATTESLTSLWKGTTPNLLRNVIINCTELVTYDLMKGALVRNEILADDVPCHFVSALIAGFCTTLLSSPVDVVKTRFINSPPGQYASVP-----NCAMTMFTKEGPTAFFKGF 270          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: KMCP1_HUMAN (Kidney mitochondrial carrier protein 1 OS=Homo sapiens GN=SLC25A30 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.556e-21
Identity = 79/261 (30.27%), Postives = 125/261 (47.89%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVT------KTML-------KNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADA-TLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGL--SELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYP-YTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAP 732
            PID+ K R+Q+ QG            + ML       + EG  A Y G++  +LRQA+Y T ++G+++ L    IE  + + LP+    +CG+ +G I +++ +P D+  IRMQA + T+      N+ N +Q        EG   LWKG   T  RA  +    L  YD + +      GL    + T   +S   G   +  S P D V+T++   +    G+   YTG++DC ++T K  G F  Y GF    +R+ P
Sbjct:   25 PIDLTKTRLQI-QGQTNDAKFKEIRYRGMLHALVRIGREEGLKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFIERPEDETLPI--NVICGILSGVISSTIANPTDVLKIRMQAQSNTIQGGMIGNFMNIYQ-------QEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHL-ILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRVLRDGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGP 274          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: S2534_DANRE (Solute carrier family 25 member 34 OS=Danio rerio GN=slc25a34 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.654e-21
Identity = 79/267 (29.59%), Postives = 122/267 (45.69%), Query Frame = 1
Query:    1 PIDMIKVRIQL-----GQGSAGTVTKTML-------KNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQAD--ATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSELPTV--IGASTVSGFFASACSLPFDYVKTQIQKMQPD--AQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMT 747
            P++++K R+QL      +GS   + + +L       + +G     KGL+A LL Q      RLGS+  +  +A    DG    L    + G  AGA+GA + SPA L    +QA   A +    + N+     AL  I   EGV  LW+G    V R M  +   LA++  + ++       S L ++  + A+ +SG   S    PFD + T++     D   QG+  Y G +DC +K   A G    Y G     VR+APH  ++
Sbjct:   44 PLEVVKTRLQLQGELRARGSYRRLYRGVLQALWVVGRTDGLRGLQKGLTAALLYQGLMNGLRLGSYAQM--QAAGVTDGPCCSL----IAGAAAGALGAFIASPAYLVKTHLQAQTVAAIAVGHQHNHQGMSSALVSIYRREGVCGLWRGVNGAVPRVMVGSATQLATFSSAKDWITHTQWFSPLSSLNTLCAAVMSGVAVSIIMTPFDVISTRLYNQPVDQFKQGRL-YCGFVDCLLKVCAAEGVLGLYKGMTPVFVRLAPHTTLS 303          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCP4_HUMAN (Mitochondrial uncoupling protein 4 OS=Homo sapiens GN=SLC25A27 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.723e-21
Identity = 71/268 (26.49%), Postives = 123/268 (45.90%), Query Frame = 1
Query:    1 PIDMIKVRIQ---------LGQGSA------GTVTKTM--LKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLP-AAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSELPTVIGASTV-SGFFASACSLPFDYVKTQIQKMQPDAQGK-YPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMM 744
            P+D+ K R+Q         LG G+       G V   +  ++ EGF   ++G++  + R   Y+  R+ ++  L       ++ +  PL++  + G+ AG IG  + +P DL  ++MQ +       +   +     A  +I+A+ G+  LW G  P + RA  +NMG L +YD    +      L +     G S++ SG  AS    P D +K++I     D QG+   Y  S DC ++ ++  G    Y GF    +R+ P  M+
Sbjct:   39 PLDLTKTRLQMQGEAALARLGDGARESAPYRGMVRTALGIIEEEGFLKLWQGVTPAIYRHVVYSGGRMVTYEHLREVVFGKSEDEHYPLWKSVIGGMMAGVIGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRGVHHAFAKILAEGGIRGLWAGWVPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGLVASILGTPADVIKSRIMNQPRDKQGRGLLYKSSTDCLIQAVQGEGFMSLYKGFLPSWLRMTPWSMV 306          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: S2535_DANRE (Solute carrier family 25 member 35 OS=Danio rerio GN=slc25a35 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.723e-21
Identity = 80/267 (29.96%), Postives = 117/267 (43.82%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQG---SAGTVTK----------TMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNA--FQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSELPTVI--GASTVSGFFASACSLPFDYVKTQIQKMQPDAQGK-YPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMT 747
            P++++K R+QL QG   S GT             T+ K +G     KGL  GL+ Q      RLGS+ +  +      DG+ +   +  + G  AG +GA +GSP  L    +Q+ +T   A    Y +     AL+ I    G+L LW+GA   + R    +   LA++  S E   D    SE   +I   A  +S         PFD V T++     D  GK   Y G +DC  KTLK  G    Y G      R+ PH +++
Sbjct:   19 PLEVVKTRMQL-QGELKSRGTYQVYYRNVFHAFYTIGKIDGLAGLQKGLVPGLVYQFFMNGVRLGSYALTESLGYIHTDGR-VSATKSTVSGAIAGVVGAVMGSPIYLVKTHLQSQSTSSIAVGHQYKHRGMTNALFAIHKQHGILGLWRGASAAIPRVSVGSAAQLATFSASKEMVNDLQVFSEGSWLIALSAGMISSVVVVLAMTPFDVVSTRLYNQPVDHLGKGMLYRGFVDCFSKTLKKEGMTGLYKGLGASYFRLGPHTILS 283          
The following BLAST results are available for this feature:
BLAST of CV712816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
UCP2_HUMAN4.095e-2230.80Mitochondrial uncoupling protein 2 OS=Homo sapiens... [more]
UCP2_PONAB5.348e-2230.80Mitochondrial uncoupling protein 2 OS=Pongo abelii... [more]
UCP2_CANFA1.191e-2130.40Mitochondrial uncoupling protein 2 OS=Canis famili... [more]
UCPA_DICDI1.556e-2131.06Mitochondrial substrate carrier family protein ucp... [more]
UCP2_CYPCA1.556e-2128.17Mitochondrial uncoupling protein 2 OS=Cyprinus car... [more]
UCP1_RABIT1.556e-2130.92Mitochondrial brown fat uncoupling protein 1 OS=Or... [more]
KMCP1_HUMAN1.556e-2130.27Kidney mitochondrial carrier protein 1 OS=Homo sap... [more]
S2534_DANRE2.654e-2129.59Solute carrier family 25 member 34 OS=Danio rerio ... [more]
UCP4_HUMAN7.723e-2126.49Mitochondrial uncoupling protein 4 OS=Homo sapiens... [more]
S2535_DANRE7.723e-2129.96Solute carrier family 25 member 35 OS=Danio rerio ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001O23_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001O23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712816 ID=CV712816; Name=CV712816; organism=Citrus sinensis; type=EST; length=749bp
CCCATCGATATGATCAAGGTGAGAATTCAGCTGGGCCAGGGATCCGCCGG
TACTGTGACAAAGACTATGCTTAAGAATGAGGGTTTTGGTGCCTTTTACA
AGGGGTTGTCTGCTGGACTGCTCAGGCAAGCTACATATACTACTGCTCGT
CTTGGATCATTTAGGATCTTGACAAACAAAGCAATTGAAGCCAATGACGG
GAAGCCTCTTCCATTGTATCAGAAAGCCTTGTGTGGGCTAACTGCTGGTG
CTATTGGAGCTTCTGTTGGTAGTCCAGCAGATTTGGCACTTATCCGTATG
CAGGCTGATGCCACACTACCTGCTGCTCAACGCCGCAATTACACTAATGC
CTTCCAAGCTCTTTATCGTATTGTTGCAGATGAAGGGGTCTTAGCACTTT
GGAAAGGTGCAGGTCCTACTGTTGTGAGAGCTATGGCATTGAACATGGGC
ATGCTTGCCTCCTACGATCAAAGTGTTGAGTTTTTCAGAGATGCGTGTGG
CTTGTCTGAACTTCCTACAGTAATCGGGGCGAGTACAGTGTCAGGGTTCT
TTGCTTCAGCTTGCAGTTTACCCTTTGATTATGTCAAAACACAAATTCAG
AAAATGCAACCAGATGCTCAAGGAAAGTATCCATACACAGGCTCTATGGA
CTGTGCCATGAAAACCCTCAAGGCTGGTGGACCATTCAAATTTTACACTG
GTTTCCCTGTGTACTGTGTTCGGATTGCTCCTCATGTCATGATGACTTG
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