CV712816

Overview
NameCV712816
Unique NameCV712816
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: MNCP_OXYFA (Macronuclear solute carrier homolog CR-MSC OS=Oxytricha fallax PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 7.228e-19
Identity = 78/266 (29.32%), Postives = 118/266 (44.36%), Query Frame = 1
Query:    1 PIDMIKVRIQL---GQGSAGT-----------VTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVE---FFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFK-------FYTGFPVYCVRI 726
            P+DM+++R Q+   G+  +G            + +      G   FY        R   YTTAR+ +F    +K  +       P +  A  G+  G I   V +P D+   RMQ D   P A RRNY+N  Q L + VA+EG  AL++GAG    +  A+   M   YD   E   FF     ++ L      + V+    +  S+PFD ++T++  M+P   G+ PY G +DC  K +K     K       FY G   Y +R+
Sbjct:   38 PLDMVRIRSQMLQEGKTFSGLGYQKGWYPFQIMEEIYAAGGGLRKFYSAFDTFFFRTVCYTTARVTAFGYFYDKVNKDPRRVARPDFLVA-AGVLGGFIAGVVTNPIDIVYNRMQVDELYPQAARRNYSNTIQGLAK-VAEEG--ALFRGAGANGFKLAAICSSMTNIYDWCKENSYFFFGPHWINRL----WGTAVAVAIGTVVSMPFDMIRTRLHTMRPLPNGQMPYNGMIDCFNKIIKYECNSKWMSNFGSFYAGGEAYFLRL 295          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: KMCP1_XENTR (Kidney mitochondrial carrier protein 1 OS=Xenopus tropicalis GN=slc25a30 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.233e-18
Identity = 76/261 (29.12%), Postives = 119/261 (45.59%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVT------KTML-------KNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATL-PAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGL--SELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQ-GKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAP 732
            PID+ K R+Q+ QG A          + ML       K EG  A Y G++  +LRQA+Y T ++G+++ L    ++  + + L +     CG+ +G + + + +P D+  IRMQA  +L       N+ N +Q        EG   LWKG   T  RA  +    L  YD + +      GL    + T   AS   G   +  S P D V+T++   +         Y G++DC ++T K  G F  Y GF    +R+ P
Sbjct:   25 PIDLTKTRLQV-QGQANDAKYKEIRYRGMLHAIVRIWKEEGVKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFVDCPEDETLVI--NVFCGVLSGVVSSCIANPTDVLKIRMQAQGSLIQGGMIGNFINIYQ-------QEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHL-ILSGLMGDTVYTHFLASFTCGLAGALASNPVDVVRTRMMNQRSIRNVSNSSYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGP 274          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: MNCP_OXYTR (Macronuclear solute carrier homolog CR-MSC OS=Oxytricha trifallax PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.610e-18
Identity = 78/266 (29.32%), Postives = 117/266 (43.98%), Query Frame = 1
Query:    1 PIDMIKVRIQL---GQGSAGT-----------VTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVE---FFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFK-------FYTGFPVYCVRI 726
            P+DM+++R Q+   G+  +G            + +      G   FY        R   YTTAR+ +F    +K  +       P +  A  G+  G I   V +P D+   RMQ D   P A RRNY+N  Q L + VA+EG  AL++GAG    +  A+   M   YD   E   FF     ++ L      + V+    +  S+PFD ++T++  M+P   G+ PY G  DC  K +K     K       FY G   Y +R+
Sbjct:   38 PLDMVRIRSQMLQEGKTFSGLGYQKGWYPFQIMEEIYAAGGGLRKFYSAFDTFFFRTVGYTTARVTAFGYFYDKVNKDPRRVARPDFLVA-AGVLGGFIAGVVTNPIDIVYNRMQVDELYPQAARRNYSNTVQGLAK-VAEEG--ALFRGAGANGFKLAAICSSMTNIYDWCKENSYFFFGPHWINRL----WGTAVAVAIGTVVSMPFDMIRTRLHTMRPLPNGQMPYNGMFDCFNKIIKYECNSKWMSNFGSFYAGGEAYFLRL 295          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: S2535_MOUSE (Solute carrier family 25 member 35 OS=Mus musculus GN=Slc25a35 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.685e-18
Identity = 73/268 (27.24%), Postives = 119/268 (44.40%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQG---SAGTVTK----------TMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKA-IEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNA--FQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFR--DACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGK-YPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMT 747
            P++++K R+QL QG   + GT  +          T+ K +G  A  KGL   LL Q      RLG++ +  ++  +  N+G   P+ + A  G  AG +GA +GSP  +    +QA A    A    Y +   FQAL  I    G++ LW+GA   + R +  +   L ++    +     +          + A+ VSG        PFD   T++     D +GK   Y G +D  ++T +  G F  Y G      R+ PH +++
Sbjct:   19 PLEVVKTRMQL-QGELQAPGTYQRHYRNVFHAFFTIGKVDGLAALQKGLGPALLYQFLMNGIRLGTYGLAESRGYLHTNEGTHSPV-RSAAAGALAGVMGAYLGSPIYMVKTHLQAQAASEIAVGHQYKHQGMFQALTEIGQKHGLVGLWRGAVGGLPRVVIGSSTQLCTFSSIKDLLSQWEIFPPQSWKVALAAAMVSGVAIVVAMTPFDVASTRLYNQPTDTRGKGLMYRGILDALLQTARTEGFFGMYKGIGASYFRLGPHTILS 284          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: KMCP1_XENLA (Kidney mitochondrial carrier protein 1 OS=Xenopus laevis GN=slc25a30 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.685e-18
Identity = 75/261 (28.74%), Postives = 121/261 (46.36%), Query Frame = 1
Query:    1 PIDMIKVRIQL-GQGSAGTVTKT-----------MLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADA-TLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGL--SELPTVIGASTVSGFFASACSLPFDYVKTQI--QKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAP 732
            PID+ K R+Q+ GQ +     +            + + EG  A Y G++  +LRQA+Y T ++G+++ L    ++  + + L L   A CG+ +G + + + +P D+  IRMQA    +      N+ N +Q        EG   LWKG   T  RA  +    L  YD + +      GL    + T   +S   G   +  S P D V+T++  Q+   DA     Y G++DC ++T K  G F  Y GF    +R+ P
Sbjct:   25 PIDLTKTRLQVQGQPNDAKYKEIRYRGMMHAIVRIWREEGVKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFVDCPEDETLVL--NAFCGVLSGVVSSCIANPTDVLKIRMQAQGNVMQGGMIVNFINIYQ-------QEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHL-ILSGLMGDTVYTHFLSSFTCGLAGALASNPVDVVRTRMMNQRSIRDASNS-SYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGP 274          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: OAC1_SCHPO (Mitochondrial oxaloacetate transport protein OS=Schizosaccharomyces pombe GN=oac1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.363e-17
Identity = 76/264 (28.79%), Postives = 112/264 (42.42%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQG-------------SAGTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRIL--TNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQA-DATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSE-LPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVM 741
            P ++IK R QL QG             S G     + ++EG     +GL    + Q      RLG +  +  T      +D K   L      G  +G  GA  GSP  L   RMQ+     P  Q+  Y + F A  RI+ + GV  L+ GA   ++R ++ +   L  Y+ +         L E +   + AS VSGF        FD V T++   +     K  Y   +DC +KT+++ G F  Y GF  +  RIAPH +
Sbjct:   43 PFEVIKTRFQL-QGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQRGLGTAYVYQICLNGCRLGFYEPIRRTLNTWFLDDPKGNKLAINVASGAGSGLCGALFGSPFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSVQLPIYNWAKRMIEHYNLLEEGMIKHLTASAVSGFGVCCTMQIFDTVMTRMYNQK----NKELYKNPIDCILKTIRSEGFFALYKGFGAHLARIAPHTI 301          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCP5_MOUSE (Brain mitochondrial carrier protein 1 OS=Mus musculus GN=Slc25a14 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.780e-17
Identity = 71/257 (27.63%), Postives = 119/257 (46.30%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVTKTM------------LKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSE-LPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAP 732
            P+D+ K R+Q+   S     K +             K EG  A Y G++  LLRQA+Y T ++G ++ L    +E  + + L +    +CG+ +G I +++ +P D+  IRMQA  +L    + +   +F  +Y+    EG   LW+G  PT  RA  +    L  YD + +    +  L + + T   +S   G   +  S P D V+T++   +        Y G++D  +K  K  G F  Y GF    +R+ P
Sbjct:   60 PVDLTKTRLQVQGQSIDVRFKEIKYRGMFHALFRIYKEEGILALYSGIAPALLRQASYGTIKIGIYQSLKRLFVERLEDETLLI--NMICGVVSGVISSTIANPTDVLKIRMQAQGSL---FQGSMIGSFIDIYQ---QEGTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLIVSGMLGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIVGHVDLYKGTLDGILKMWKHEGFFALYKGFWPNWLRLGP 308          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: UCP5_HUMAN (Brain mitochondrial carrier protein 1 OS=Homo sapiens GN=SLC25A14 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.766e-17
Identity = 70/257 (27.24%), Postives = 119/257 (46.30%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVTKTM------------LKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSE-LPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAP 732
            P+D+ K R+Q+   S     K +             K EG  A Y G++  LLRQA+Y T ++G ++ L    +E  + + L +    +CG+ +G I +++ +P D+  IRMQA  +L    + +   +F  +Y+    EG   LW+G  PT  RA  +    L  YD + +    +  + + + T   +S   G   +  S P D V+T++   +        Y G++D  +K  K  G F  Y GF    +R+ P
Sbjct:   60 PVDLTKTRLQVQGQSIDARFKEIKYRGMFHALFRICKEEGVLALYSGIAPALLRQASYGTIKIGIYQSLKRLFVERLEDETLLI--NMICGVVSGVISSTIANPTDVLKIRMQAQGSL---FQGSMIGSFIDIYQ---QEGTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGP 308          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: HDCPB_DANRE (Hepatocellular carcinoma down-regulated mitochondrial carrier homolog B OS=Danio rerio GN=hdmcpb PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.766e-17
Identity = 68/254 (26.77%), Postives = 108/254 (42.52%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAG---TVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRIL---TNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADAT----LPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAP 732
            P+D +KVR+Q   G +G    V KT  +NEG   FY+G+S  +   +  ++   G++R +    ++    + G+P       L G T G     V +PAD+  +R+Q        +       Y    Q L RI  DEG+L L+KG+    +R          +Y+   E           P V+ A  VSG    A   P D +K+   ++Q D      Y G + C   +++  G    + G  V C+R  P
Sbjct:   22 PLDTVKVRLQTQTGYSGFWQCVRKTC-RNEGLQGFYRGMSMPISTVSISSSLVFGTYRNILQFLHQLQHRSAGEPHHKAHIFLAGFTGGVTQVLVMAPADIVKVRLQCQTEPVQHISQESSSKYRGPVQCLLRIARDEGLLGLYKGSAALALRDGPSFATYFLTYNTICEILTTENQRPGWPVVLLAGGVSGMCGWAVGTPMDVIKS---RLQVDGVSGRRYRGFLHCITHSVRTEGSGVLFRGLTVNCIRAFP 271          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: S2535_HUMAN (Solute carrier family 25 member 35 OS=Homo sapiens GN=SLC25A35 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.154e-16
Identity = 73/268 (27.24%), Postives = 118/268 (44.03%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQG---SAGTVTK----------TMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRIL-TNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNA--FQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFR--DACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGK-YPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMT 747
            P++++K R+QL QG   + GT  +          T+ K +G  A  KGL+  LL Q      RLG++ +      +   +G   P  + A  G  AG +GA +GSP  +    +QA A    A    Y +   FQAL  I    G++ LW+GA   + R +  +   L ++  + +     +          + A+ +SG        PFD   T++     DAQGK   Y G +D  ++T +  G F  Y G      R+ PH +++
Sbjct:   19 PLEVVKTRMQL-QGELQAPGTYQRHYRNVFHAFITIGKVDGLAALQKGLAPALLYQFLMNGIRLGTYGLAEAGGYLHTAEGTHSPA-RSAAAGAMAGVMGAYLGSPIYMVKTHLQAQAASEIAVGHQYKHQGMFQALTEIGQKHGLVGLWRGALGGLPRVIVGSSTQLCTFSSTKDLLSQWEIFPPQSWKLALVAAMMSGIAVVLAMAPFDVACTRLYNQPTDAQGKGLMYRGILDALLQTARTEGIFGMYKGIGASYFRLGPHTILS 284          
The following BLAST results are available for this feature:
BLAST of CV712816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
MNCP_OXYFA7.228e-1929.32Macronuclear solute carrier homolog CR-MSC OS=Oxyt... [more]
KMCP1_XENTR1.233e-1829.12Kidney mitochondrial carrier protein 1 OS=Xenopus ... [more]
MNCP_OXYTR1.610e-1829.32Macronuclear solute carrier homolog CR-MSC OS=Oxyt... [more]
S2535_MOUSE4.685e-1827.24Solute carrier family 25 member 35 OS=Mus musculus... [more]
KMCP1_XENLA4.685e-1828.74Kidney mitochondrial carrier protein 1 OS=Xenopus ... [more]
OAC1_SCHPO1.363e-1728.79Mitochondrial oxaloacetate transport protein OS=Sc... [more]
UCP5_MOUSE1.780e-1727.63Brain mitochondrial carrier protein 1 OS=Mus muscu... [more]
UCP5_HUMAN6.766e-1727.24Brain mitochondrial carrier protein 1 OS=Homo sapi... [more]
HDCPB_DANRE6.766e-1726.77Hepatocellular carcinoma down-regulated mitochondr... [more]
S2535_HUMAN1.154e-1627.24Solute carrier family 25 member 35 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001O23_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001O23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712816 ID=CV712816; Name=CV712816; organism=Citrus sinensis; type=EST; length=749bp
CCCATCGATATGATCAAGGTGAGAATTCAGCTGGGCCAGGGATCCGCCGG
TACTGTGACAAAGACTATGCTTAAGAATGAGGGTTTTGGTGCCTTTTACA
AGGGGTTGTCTGCTGGACTGCTCAGGCAAGCTACATATACTACTGCTCGT
CTTGGATCATTTAGGATCTTGACAAACAAAGCAATTGAAGCCAATGACGG
GAAGCCTCTTCCATTGTATCAGAAAGCCTTGTGTGGGCTAACTGCTGGTG
CTATTGGAGCTTCTGTTGGTAGTCCAGCAGATTTGGCACTTATCCGTATG
CAGGCTGATGCCACACTACCTGCTGCTCAACGCCGCAATTACACTAATGC
CTTCCAAGCTCTTTATCGTATTGTTGCAGATGAAGGGGTCTTAGCACTTT
GGAAAGGTGCAGGTCCTACTGTTGTGAGAGCTATGGCATTGAACATGGGC
ATGCTTGCCTCCTACGATCAAAGTGTTGAGTTTTTCAGAGATGCGTGTGG
CTTGTCTGAACTTCCTACAGTAATCGGGGCGAGTACAGTGTCAGGGTTCT
TTGCTTCAGCTTGCAGTTTACCCTTTGATTATGTCAAAACACAAATTCAG
AAAATGCAACCAGATGCTCAAGGAAAGTATCCATACACAGGCTCTATGGA
CTGTGCCATGAAAACCCTCAAGGCTGGTGGACCATTCAAATTTTACACTG
GTTTCCCTGTGTACTGTGTTCGGATTGCTCCTCATGTCATGATGACTTG
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