CV712816

Overview
NameCV712816
Unique NameCV712816
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: MCP62_DANRE (Putative mitochondrial carrier protein FLJ44862 homolog OS=Danio rerio GN=zgc:92090 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.475e-13
Identity = 65/269 (24.16%), Postives = 107/269 (39.78%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTV--TKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSF---RILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRN-------------------YTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSELPTVIG-ASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAP 732
            P+D +K R+Q G+G   T     T+ K E    F+KGLS  L     Y +   G F   + L +K    +   P  +    +  +  G +   VG+P DL  IR+Q       A+  N                   Y      +  ++ +EG+  L++GAG  ++R +         Y     +       S  P  I  A  ++G  +   + P D VK+   ++Q DA  +  Y G + C M++ +  G   F+ G  V  +R  P
Sbjct:   25 PLDTVKTRLQAGKGYKNTFHCVVTIYKKENVIGFFKGLSFPLASITLYNSMVFGFFSNTQRLISKYRYGDGRHPCSMLDLTVASMLTGLVSVGVGAPVDLVKIRLQMQTQPVLAENFNLAGNGSVPLRSMGIQSQSFYRGPLHCISTVLQNEGIQGLYRGAGAMILRDIPGYALYFIPYTLFCNWLNPDDNSSPPPCCIWLAGGLAGSISWVTATPSDVVKS---RLQADAMHQRKYKGILHCIMQSYRTEGIHVFFRGATVNAIRGFP 290          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: MCFM_DICDI (Mitochondrial substrate carrier family protein M OS=Dictyostelium discoideum GN=mcfM PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.475e-13
Identity = 69/267 (25.84%), Postives = 108/267 (40.45%), Query Frame = 1
Query:    1 PIDMIKVRIQ-LGQGSAGTVTK-----------TMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLS----ELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQ--PDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMT 747
            P D +K+R+Q  G  S G + K            +LKNEG   F++G S  ++         +  +    N      +   L  +   +C + A A    + +P  L   RMQ      A     YT  F  + + V  EG   L+KG  P++       + M +SY+    +F    G S        +  AS++S F AS    PF  VKT++Q  +  P+      Y G+ D   K LK  G   FY G     +++ P+  +T
Sbjct:   27 PFDFLKIRLQGSGFASGGDLNKFKRVGVIDTCKNVLKNEGIKQFWRGSSPTIVASGIAWGTYMHFYEAYKNILKSKYNVTQLNTFDHFICAVGASATQVFITNPIFLIKTRMQLQTPGSA---NYYTGIFDGIKKTVKVEGFKGLYKGVIPSLWLTFHGGIQM-SSYEHIKFYFSSNSGKSLDSLNASEIFIASSISKFLASTILYPFQVVKTRLQDERNIPNQNNVRVYNGTKDVIFKILKNEGIIGFYRGLVPNTLKVIPNTSIT 289          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: GHC1_BOVIN (Mitochondrial glutamate carrier 1 OS=Bos taurus GN=SLC25A22 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.538e-13
Identity = 74/278 (26.62%), Postives = 118/278 (42.45%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVTKTM------LKNEGFGAFYKGLSAGLLRQATYTTARLGS---FRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYT-----------------------NAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSELPTVIG--ASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAP 732
            PID+ K R+Q  Q      T         +++EG+   Y+G +  L         +L +   FR   +K     DG+ L L+++ L G  AG     V +P ++  I++Q DA   AAQR+  +                        A Q    ++   G+  L+KG G T++R +  ++     +    E  R A G  + P  +   A  V+G  A+    P D VKT++Q +Q     +  Y+G +DCA K L+  GP  F  G     + IAP
Sbjct:   28 PIDLAKTRLQNQQNGQRMYTSMSDCLIKTIRSEGYFGMYRGAAVNLTLVTPEKAIKLAANDFFRYQLSK-----DGQQLTLFKEMLAGCGAGTCQVIVTTPMEMLKIQLQ-DAGRLAAQRKILSAQAQLSGQGSAQPSVEAPATPRPTATQLTRDLLRSRGIAGLYKGLGATLLRDVPFSIVYFPLFANLNELGRPASG-EKSPFYVSFLAGCVAGSAAAVAVNPCDVVKTRLQSLQRGIN-EDTYSGFLDCARKILQNEGPSAFLKGAYCRALVIAP 297          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: MCFS_DICDI (Mitochondrial substrate carrier family protein S OS=Dictyostelium discoideum GN=mcfS PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.927e-13
Identity = 54/211 (25.59%), Postives = 95/211 (45.02%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVT--KTMLKNEGFGAFYKGLSA---GLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLS------ELPTVIGASTVSGFFASACSLPFDYVKTQIQ 600
            P D I+VR+Q      G +   +  +K EGF   YKG+++   G++ +     A  G  ++L  K    ++  PL + Q A+ G  AG   + V +P +L   R+Q   T P    + Y  +   L +I+ + G+   ++G  PT+ R    NM   ++Y+    +F++            LP +I +  + G        P D  K++IQ
Sbjct:   26 PFDTIRVRLQTSNTPIGIMECFRNTIKYEGFSGLYKGVTSPLFGMMFETAVLFAGYGQMKVLLQK----DENTPLTVGQCAIAGGFAGVGASVVLTPVELVKCRLQVQTTGP----QKYKGSLDCLVQILKEGGIRGAYRGFTPTIAREFVGNMAFFSTYETCKRYFKNKENKPNDDDELNLPALIISGGLGGMAYWTVLYPVDVAKSKIQ 228          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: ODC_SCHPO (Probable mitochondrial 2-oxodicarboxylate carrier OS=Schizosaccharomyces pombe GN=SPAC328.09 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.741e-13
Identity = 68/254 (26.77%), Postives = 105/254 (41.34%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSA---GTVT--KTMLKNEGFGAFYKGLSAGLLRQATYTTARLGS---FRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACG-LSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYP-YTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAP 732
            P+D++K R+QL  G +   GT    K ++KNEG    Y+G+   +L +A     +  S   +  L  K  +  D  P       L G  AG     V  P +L  IR+Q            Y        +IV  E +LAL+ G   T+ R +  N G      +       A   + E+   + A T+ G F +  S PFD +K++IQ + P   G+ P Y  +    +   +  G    Y GF    +R+ P
Sbjct:   28 PLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLWRKVFKRKDSSPA---LSILTGSCAGFTETFVVVPFELMKIRLQ-----DVKNASKYNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAGYFGVIQKIRNSLTPASSRIGEIRNNLIAGTIGGIFGTFLSTPFDVIKSRIQTV-PRIAGQVPKYNWAYPALVTVAREEGFTALYKGFVPKVLRLGP 272          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: MCFY_DICDI (Mitochondrial substrate carrier family protein Y OS=Dictyostelium discoideum GN=mcfY PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.320e-12
Identity = 71/273 (26.01%), Postives = 112/273 (41.03%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQ----GSAGTVT------KTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQAD---ATLPAAQRRNYTNAFQA-------LYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSELPT------------VIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVR 723
            P+D+IK RIQL Q    G  GT T      K ++K EG    +KGLS+ L+  A  T  + G F        +    K          G  AG   + +  P DL  I+MQ     ++ P +   N  N  +        +YR   ++G+L  ++G  PT+ R    ++  LA +  + E  +   G  EL T            ++ +   +G F    + PFD  KT IQ  +   +    Y G+ DC  +  +  GP   + GF    ++
Sbjct:  157 PLDLIKTRIQLSQSGVSGGGGTNTSIIKIFKDVIKTEGVIGLFKGLSSPLILSALVTAIQFGLFEDTLKYFRKHQYFKNHDTLSLLFSGSIAGFAQSFITCPVDLVKIQMQIQGIPSSQPNSNNNNNNNKAKGNSYFTKLIYR---EKGLLGFYQGLSPTLFR----DVPGLAIFFTTYETLKKQFGQPELSTQSPTEFIKSFIPIVLSGGSAGVFYHGLTHPFDIAKTLIQSDRSATK----YKGTFDCLKQVYQNQGPKSLFKGFSAVAIK 418          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: MCAT_ARATH (Mitochondrial carnitine/acylcarnitine carrier-like protein OS=Arabidopsis thaliana GN=BOU PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.724e-12
Identity = 77/265 (29.06%), Postives = 108/265 (40.75%), Query Frame = 1
Query:    1 PIDMIKVRIQL------GQ-----GSAGTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRN-------YTNAFQALYRIVADEG-VLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSELP--TVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAP 732
            P D IKV++Q       GQ     G+   V +T+  +EG    YKG+ A L   A +  A L + R      + +  G PL + Q+ + G  AG   + +  P +L   R+QA   L  A   +       Y         ++  EG    L+KG  PT  R +  N  M A+Y+    F       S L   ++I A  V+G        P D VK+ +Q    D      YTGSMD   K LK+ G    Y GF     R  P
Sbjct:   24 PFDTIKVKLQSQPTPAPGQLPRYTGAIDAVKQTVA-SEGTKGLYKGMGAPLATVAAFN-AVLFTVRGQMEGLLRSEAGVPLTISQQFVAGAGAGFAVSFLACPTELIKCRLQAQGALAGASTTSSVVAAVKYGGPMDVARHVLRSEGGARGLFKGLFPTFAREVPGNATMFAAYEAFKRFLAGGSDTSSLGQGSLIMAGGVAGASFWGIVYPTDVVKSVLQV---DDYKNPRYTGSMDAFRKILKSEGVKGLYKGFGPAMARSVP 283          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: AGC1_ASHGO (Mitochondrial aspartate-glutamate transporter AGC1 OS=Ashbya gossypii GN=AGC1 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.724e-12
Identity = 73/262 (27.86%), Postives = 121/262 (46.18%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQ------GSAGTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAM---ALNMGMLASYDQSVEFF--RDACGLSELPT--VIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMT 747
            PIDM+K R+Q  +       S   + K +L  EG    Y GL   L+  A     +L +        +   DGK L L  + + G TAGA      +P ++  IR+Q  +   A   RN  NA      ++ + G++ L++GAG  ++R +   A+     A    +V  F  +D+   ++L T  ++ +  ++G  A+  + PFD +KT++Q + P  +G+  Y G  D A   LK  G   F+ G P   +R +P    T
Sbjct:  543 PIDMVKTRMQAQRDFSKYKNSIDCLLK-ILSKEGVRGLYSGLGPQLIGVAPEKAIKL-TVNDHMRATLAGRDGK-LSLPCEIISGATAGACQVVFTNPLEIVKIRLQVKSDYVADAARNSVNAIS----VIKNLGLIGLYRGAGACLLRDIPFSAIYFPTYAHIKSNVFNFDPKDSDKRNKLNTWQLLVSGGLAGMPAAFLTTPFDVIKTRLQ-IDP-KKGESVYNGIWDAARTILKEEGIKSFFKGGPARVLRSSPQFGFT 795          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: MCFX_DICDI (Mitochondrial substrate carrier family protein X OS=Dictyostelium discoideum GN=mcfX PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.941e-12
Identity = 65/252 (25.79%), Postives = 111/252 (44.05%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSA-------GTVT--KTMLKNEG-FGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDA-CGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTG-FPVYCV 720
            P+D +K R+Q  + S        G +   K ++KNEG     Y+GLS+ L+        +L        +     D   + L+++   G  AG       +P +L  IRMQ             +    +L  +V++ G+  L+KG   T++R +  +M   + Y +      D   G   LP ++     +G  A++ S PFD +KT+IQ ++P     + Y G  DC  KT+++ GP   + G  P  C+
Sbjct:   40 PLDFVKTRLQQQRVSIDGSKQYNGIIDCFKKVIKNEGGVRGLYRGLSSNLIGIIPEKALKLAMNDYFRTRF--QGDRSYIKLWEEVASGGLAGMCQVVATNPMELVKIRMQVSGL---------SGKKASLKEVVSELGIKGLYKGTASTLLRDVPFSMIYFSIYGRMKHNLTDQETGEIGLPKILLCGITAGSIAASVSTPFDVIKTRIQ-VKPGPNDPH-YKGIADCFRKTIQSEGPKALFKGVLPRVCI 278          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: GHC1_PONAB (Mitochondrial glutamate carrier 1 OS=Pongo abelii GN=SLC25A22 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.842e-12
Identity = 70/275 (25.45%), Postives = 115/275 (41.82%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVTKTM------LKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYT-----------------------NAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSELPTVIG--ASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAP 732
            PID+ K R+Q  Q      T         +++EG+   Y+G +  L         +L +     ++   + DG+ L L ++ L G  AG     V +P ++  I++Q DA   AAQR+                           A Q    ++   G+  L+KG G T++R + L++     +    +  R A    + P  +   A  V+G  A+    P D VKT++Q +Q     +  Y+G +DCA K L+  GP  F  G     + IAP
Sbjct:   28 PIDLAKTRLQNQQNGQRMYTSMSDCLIKTIRSEGYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQL--SKDGQKLTLLKEMLAGCGAGTCQVIVTTPMEMLKIQLQ-DAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAPRPTAIQLTRDLLRSRGIAGLYKGLGATLLRDVPLSVVYFPLFANLNQLGRPASE-EKSPFYVSFLAGCVAGSAAAVAVNPCDVVKTRLQSLQRGVN-EDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAP 297          
The following BLAST results are available for this feature:
BLAST of CV712816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
MCP62_DANRE3.475e-1324.16Putative mitochondrial carrier protein FLJ44862 ho... [more]
MCFM_DICDI3.475e-1325.84Mitochondrial substrate carrier family protein M O... [more]
GHC1_BOVIN4.538e-1326.62Mitochondrial glutamate carrier 1 OS=Bos taurus GN... [more]
MCFS_DICDI5.927e-1325.59Mitochondrial substrate carrier family protein S O... [more]
ODC_SCHPO7.741e-1326.77Probable mitochondrial 2-oxodicarboxylate carrier ... [more]
MCFY_DICDI1.320e-1226.01Mitochondrial substrate carrier family protein Y O... [more]
MCAT_ARATH1.724e-1229.06Mitochondrial carnitine/acylcarnitine carrier-like... [more]
AGC1_ASHGO1.724e-1227.86Mitochondrial aspartate-glutamate transporter AGC1... [more]
MCFX_DICDI2.941e-1225.79Mitochondrial substrate carrier family protein X O... [more]
GHC1_PONAB3.842e-1225.45Mitochondrial glutamate carrier 1 OS=Pongo abelii ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001O23_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001O23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712816 ID=CV712816; Name=CV712816; organism=Citrus sinensis; type=EST; length=749bp
CCCATCGATATGATCAAGGTGAGAATTCAGCTGGGCCAGGGATCCGCCGG
TACTGTGACAAAGACTATGCTTAAGAATGAGGGTTTTGGTGCCTTTTACA
AGGGGTTGTCTGCTGGACTGCTCAGGCAAGCTACATATACTACTGCTCGT
CTTGGATCATTTAGGATCTTGACAAACAAAGCAATTGAAGCCAATGACGG
GAAGCCTCTTCCATTGTATCAGAAAGCCTTGTGTGGGCTAACTGCTGGTG
CTATTGGAGCTTCTGTTGGTAGTCCAGCAGATTTGGCACTTATCCGTATG
CAGGCTGATGCCACACTACCTGCTGCTCAACGCCGCAATTACACTAATGC
CTTCCAAGCTCTTTATCGTATTGTTGCAGATGAAGGGGTCTTAGCACTTT
GGAAAGGTGCAGGTCCTACTGTTGTGAGAGCTATGGCATTGAACATGGGC
ATGCTTGCCTCCTACGATCAAAGTGTTGAGTTTTTCAGAGATGCGTGTGG
CTTGTCTGAACTTCCTACAGTAATCGGGGCGAGTACAGTGTCAGGGTTCT
TTGCTTCAGCTTGCAGTTTACCCTTTGATTATGTCAAAACACAAATTCAG
AAAATGCAACCAGATGCTCAAGGAAAGTATCCATACACAGGCTCTATGGA
CTGTGCCATGAAAACCCTCAAGGCTGGTGGACCATTCAAATTTTACACTG
GTTTCCCTGTGTACTGTGTTCGGATTGCTCCTCATGTCATGATGACTTG
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