CV712816

Overview
NameCV712816
Unique NameCV712816
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: MCFG_DICDI (Mitochondrial substrate carrier family protein G OS=Dictyostelium discoideum GN=mcfG PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.558e-12
Identity = 69/260 (26.54%), Postives = 110/260 (42.31%), Query Frame = 1
Query:    1 PIDMIKVRIQ-------LGQGSAGTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARL---GSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFF--RDACGLSELPT--VIGASTVSGFFASACSLPFDYVKTQIQKMQPDA--QGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAP 732
            P+D IKVR+Q       +  G+   + KT +  EGF   YKG+++ L+  +   +      G  + L  K +  N  + L L      G  AG     V +P DL   +MQ         +  Y +      +I    GV  +++G G T+VR +  N     +Y+   +F   +D   +++L +  ++ A    G      + P D VK+    MQ DA  + +  Y   +DCA K  K  G   FY GF    +R  P
Sbjct:   33 PLDTIKVRLQTQSVGNPIYSGTMDCLKKT-ISQEGFAGLYKGVASPLVGLSIMNSVMFLAYGQSKTLIQK-LSDNPNEALDLKGLTAAGALAGIAIGFVDAPVDLFKSQMQVQQ----GDKNQYKSTADCAKQIWKVGGVRGVFQGLGATLVRDIPANACYFGAYELCRDFLASKDNISVNQLSSLQIMAAGGAGGVSYWTLTYPADVVKST---MQTDAIVKSQRKYKNMIDCASKIYKQQGIAGFYKGFTPCFIRSVP 283          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: CMC2_HUMAN (Calcium-binding mitochondrial carrier protein Aralar2 OS=Homo sapiens GN=SLC25A13 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 8.558e-12
Identity = 65/260 (25.00%), Postives = 109/260 (41.92%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVTKTMLKN-----------EGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMT 747
            PID++K R+Q  + +   V + M KN           EGF   Y+GL   LL  A     +L     + +K +   DG  +PL  + L G  AG       +P ++  IR+Q    +    R +  +       +V D G   ++KGA    +R +  +      Y      F +  G     +++ A  ++G  A++   P D +KT++Q       G+  Y+G +DC  K L+  GP   + G      R +P   +T
Sbjct:  348 PIDLVKTRMQNQRSTGSFVGELMYKNSFDCFKKVLRYEGFFGLYRGLLPQLLGVAPEKAIKLTVNDFVRDKFMH-KDGS-VPLAAEILAGGCAGGSQVIFTNPLEIVKIRLQVAGEITTGPRVSALS-------VVRDLGFFGIYKGAKACFLRDIPFSAIYFPCYAHVKASFANEDGQVSPGSLLLAGAIAGMPAASLVTPADVIKTRLQVAA--RAGQTTYSGVIDCFRKILREEGPKALWKGAGARVFRSSPQFGVT 596          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: HDMCP_RAT (Hepatocellular carcinoma down-regulated mitochondrial carrier homolog OS=Rattus norvegicus GN=Hdmcp PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.118e-11
Identity = 66/277 (23.83%), Postives = 112/277 (40.43%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQG--SAGTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRI----LTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRR------------------------NYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSELPTVIG---ASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAP 732
            P+D +KV+IQ      S     +   + E    FY+GLS  +   +  ++   G++      +      + D KP       L G  +G +   + SP ++A +R+Q  A     QRR                         Y+     L  +  +EG+  L+KG+   ++R          SY    E+   A G S+ P V+G   A   +G  A A + P D +K+   ++Q D QG+  Y G + C + +++  GP   + G  + C R  P
Sbjct:   19 PLDTVKVKIQTEAKYTSIWHCVRDTYRQERLWGFYRGLSLPVCTVSLVSSVSFGTYHHCLAHICRFRYGSTDVKPTKA-DITLSGCASGLVRVFLTSPTEVAKVRLQTQAQSQTQQRRPSASWTSVAPALCPAPTACLEPRPKYSGPLHCLVTVAREEGLRGLYKGSSALLLREGHSFATYFLSYAVLSEWLTPA-GQSQ-PDVLGVLVAGGCAGVLAWAVATPMDVIKS---RLQADGQGQQRYRGLLHCVVTSVREEGPRVLFKGLALNCCRAFP 289          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: GHC1_HUMAN (Mitochondrial glutamate carrier 1 OS=Homo sapiens GN=SLC25A22 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.907e-11
Identity = 69/275 (25.09%), Postives = 114/275 (41.45%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVTKTM------LKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYT-----------------------NAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSELPTVIG--ASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAP 732
            PID+ K R+Q  Q      T         +++EG+   Y+G +  L         +L +     ++   + DG+ L L ++ L G  AG     V +P ++  I++Q DA   AAQR+                           A Q    ++   G+  L+KG G T++R +  ++     +    +  R A    + P  +   A  V+G  A+    P D VKT++Q +Q     +  Y+G +DCA K L+  GP  F  G     + IAP
Sbjct:   28 PIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSEGYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQL--SKDGQKLTLLKEMLAGCGAGTCQVIVTTPMEMLKIQLQ-DAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAPRPTATQLTRDLLRSRGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASE-EKSPFYVSFLAGCVAGSAAAVAVNPCDVVKTRLQSLQRGVN-EDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAP 297          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: CMC2_MACFA (Calcium-binding mitochondrial carrier protein Aralar2 OS=Macaca fascicularis GN=SLC25A13 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.907e-11
Identity = 62/245 (25.31%), Postives = 105/245 (42.86%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVTKTMLKN-----------EGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTG 702
            PID++K R+Q  + +   V + M KN           EGF   Y+GL   LL  A     +L     + +K +   DG  +PL  + L G  AG       +P ++  IR+Q    +    R +  +       +V D G   ++KGA    +R +  +      Y  +   F +  G     +++ A  ++G  A++   P D +KT++Q       G+  Y+G +DC  K L+  GP   + G
Sbjct:  348 PIDLVKTRMQNQRSTGSFVGELMYKNSFDCFKKVLRYEGFFGLYRGLLPQLLGVAPEKAIKLTVNDFVRDKFMH-KDGS-VPLAAEILAGGCAGGSQVIFTNPLEIVKIRLQVAGEITTGPRVSALS-------VVRDLGFFGIYKGAKACFLRDIPFSAIYFPCYAHARASFANEDGQVSPGSLLLAGAIAGMPAASLVTPADVIKTRLQVAA--RAGQTTYSGVIDCFKKILREEGPKALWKG 581          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: TPC1_PICGU (Mitochondrial thiamine pyrophosphate carrier 1 OS=Pichia guilliermondii GN=TPC1 PE=3 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.490e-11
Identity = 67/265 (25.28%), Postives = 109/265 (41.13%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAG-------TVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTN--KAIEANDGKPL-PLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGML-----------ASYDQSVEFFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAP 732
            P+D +K+R+QL   S G       TV + + KNEG  AF+KG     +    Y   +  S+ + +     +E   G  L P     + G +AG     V  P DL   R+ A++       R++ +    + ++ A  G+  L+ GA PT++ ++ LN G++           A Y  ++ F    C               GFFA A S    +    ++K       K   T  +  A   L+  G F FY GF +  ++ AP
Sbjct:   37 PLDTVKIRLQLSNKSLGAHDGLRQTVVR-IFKNEGIRAFWKGNVPAEIMYILYGATQFTSYSMFSKALTELETTYGFNLRPSNHSLIVGTSAGLTSLIVTYPFDLLRTRLAANS------ERHFLSMTAVIKQVRASGGLAGLYMGAKPTLL-SLGLNSGLMFWTYEIAREVSAQYKDNIPFIEGFC---------------GFFAGASSKGITFPLDTLRKRMQMRSSK---TSIIGLARTILRREGLFGFYKGFGISLIKTAP 275          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: CMC2_MOUSE (Calcium-binding mitochondrial carrier protein Aralar2 OS=Mus musculus GN=Slc25a13 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.490e-11
Identity = 64/260 (24.62%), Postives = 106/260 (40.77%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVTKTMLKN-----------EGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMT 747
            PID++K R+Q  + +   V + M KN           EGF   Y+GL   LL  A     +L     + +K +   DG  +PL  +   G  AG       +P ++  IR+Q    +    R +  +       +V D G   ++KGA    +R +  +      Y      F +  G     +++ A  ++G  A++   P D +KT++Q       G+  Y G  DC  K L+  GP   + G      R +P   +T
Sbjct:  349 PIDLVKTRMQNQRSTGSFVGELMYKNSFDCFKKVLRYEGFFGLYRGLLPQLLGVAPEKAIKLTVNDFVRDKFMH-KDGS-VPLLAEIFAGGCAGGSQVIFTNPLEIVKIRLQVAGEITTGPRVSALS-------VVRDLGFFGIYKGAKACFLRDIPFSAIYFPCYAHVKASFANEDGQVSPGSLLLAGAIAGMPAASLVTPADVIKTRLQVAA--RAGQTTYNGVTDCFRKILREEGPKALWKGVAARVFRSSPQFGVT 597          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: YD1K_SCHPO (Uncharacterized mitochondrial carrier C4G9.20c OS=Schizosaccharomyces pombe GN=SPAC4G9.20c PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.252e-11
Identity = 74/258 (28.68%), Postives = 106/258 (41.09%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQG------SAGTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVR-AMALNMGMLASYDQSVEFFRDACGL---SELP----TVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAP 732
            P D +KVR+Q          +A    K + KNEG  AFYKG    LL      + +  +F     K   + DG P+ + Q  + G  +G   + +  P +   IR+Q    +   +   Y   +  + +I +  G+  + KG  PT  R A  L M  LA Y+  V+       L   S+ P     V GA   +G+     + PFD VK++IQ        K  Y  S  CA       G   FY GF    VR AP
Sbjct:   37 PFDCVKVRLQSQSNVSPIYNNALDCVKKISKNEGLAAFYKGTVLPLLGIGFCVSIQFTTFEYC--KRFFSRDGTPVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQ----IQTGKNVLYHGPWDCIKKISSQYGLSGIMKGYNPTAAREAHGLGMYFLA-YEALVKNTMAKHHLTDRSQTPGWKLCVFGAG--AGYAMWLAAYPFDIVKSKIQ--TDGFLSKATYKNSWQCAKGIYTKAGLRGFYRGFVPVLVRAAP 283          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: MCFL_DICDI (Mitochondrial substrate carrier family protein L OS=Dictyostelium discoideum GN=mcfL PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.252e-11
Identity = 63/250 (25.20%), Postives = 105/250 (42.00%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVT------KTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAP 732
            P D +KVR+Q  +GS G          T +K EGF A YKG++  LL  +   +   G+  I+ +K I  +   P+ L +  + G   G I + V  P +    ++Q   T      + Y      + +I    G+  L+K   PT  +  +L       Y+ +  + R   G   +     A  ++G      + PFD ++++I  M P  +    Y G +DCA    +  G   F+ GF    +R  P
Sbjct:   30 PFDTLKVRLQT-EGSTGRFRGLAHCFTTTIKEEGFFALYKGVTPPLLGMSIINSCMFGAMNIVKSK-IHTDKSTPISLGEIMVSGAITGWIVSFVACPIETVKSKLQVQYT----GVKLYNGPIDCIKKI----GIRGLYKALIPTGFQRNSL-YAYFGCYELAQRYLRREDGSMTMGRSFIAGGIAGTGFWLTNFPFDVIRSRIMTM-PYNESPPRYKGMIDCAKHIYRVDGLKGFWKGFSPCLLRTFP 267          
BLAST of CV712816 vs. ExPASy Swiss-Prot
Match: MCP62_MOUSE (Putative mitochondrial carrier protein FLJ44862 homolog OS=Mus musculus PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.247e-11
Identity = 70/262 (26.72%), Postives = 106/262 (40.46%), Query Frame = 1
Query:    1 PIDMIKVRIQLGQGSAGTVT--KTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSF----RILTN-KAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQ--------ADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFR-DACGLSELPTVIGASTVSGFFASACSLPFDYVKTQIQKMQPDAQGKY--PYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAP 732
            P+D +K R+Q G G A T    + + K E    F+KG+S  L   A Y +   G F    R L+  +  E   G    L    L  +  G +   +G P +L  IR+Q        A   L +     Y      +  IV  EG+  L++GA   ++R +         Y    E+   +AC          A  ++G  +   + P D VK++IQ     A G Y   Y G +DC  ++ +  G   F+ G  V  VR  P
Sbjct:   25 PLDTVKTRLQAGVGYANTFNCIRMVYKRERVFGFFKGMSFPLASIAIYNSVVFGVFSNTQRFLSKYRCGELEAGPGRSLSDLLLASMLTGVVSVGLGGPVELIKIRLQMQTQPFREASHGLKSRAVAAYQGPVHCIATIVQMEGLTGLYRGASAMLLRDIPGYCFYFIPYVFLSEWITPEACTGPSPYAAWLAGGIAGAISWGTATPMDVVKSRIQ-----ADGVYLNKYRGVVDCISQSYQQEGFKVFFRGITVNAVRGFP 281          
The following BLAST results are available for this feature:
BLAST of CV712816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
MCFG_DICDI8.558e-1226.54Mitochondrial substrate carrier family protein G O... [more]
CMC2_HUMAN8.558e-1225.00Calcium-binding mitochondrial carrier protein Aral... [more]
HDMCP_RAT1.118e-1123.83Hepatocellular carcinoma down-regulated mitochondr... [more]
GHC1_HUMAN1.907e-1125.09Mitochondrial glutamate carrier 1 OS=Homo sapiens ... [more]
CMC2_MACFA1.907e-1125.31Calcium-binding mitochondrial carrier protein Aral... [more]
TPC1_PICGU2.490e-1125.28Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
CMC2_MOUSE2.490e-1124.62Calcium-binding mitochondrial carrier protein Aral... [more]
YD1K_SCHPO3.252e-1128.68Uncharacterized mitochondrial carrier C4G9.20c OS=... [more]
MCFL_DICDI3.252e-1125.20Mitochondrial substrate carrier family protein L O... [more]
MCP62_MOUSE4.247e-1126.72Putative mitochondrial carrier protein FLJ44862 ho... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001O23_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001O23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712816 ID=CV712816; Name=CV712816; organism=Citrus sinensis; type=EST; length=749bp
CCCATCGATATGATCAAGGTGAGAATTCAGCTGGGCCAGGGATCCGCCGG
TACTGTGACAAAGACTATGCTTAAGAATGAGGGTTTTGGTGCCTTTTACA
AGGGGTTGTCTGCTGGACTGCTCAGGCAAGCTACATATACTACTGCTCGT
CTTGGATCATTTAGGATCTTGACAAACAAAGCAATTGAAGCCAATGACGG
GAAGCCTCTTCCATTGTATCAGAAAGCCTTGTGTGGGCTAACTGCTGGTG
CTATTGGAGCTTCTGTTGGTAGTCCAGCAGATTTGGCACTTATCCGTATG
CAGGCTGATGCCACACTACCTGCTGCTCAACGCCGCAATTACACTAATGC
CTTCCAAGCTCTTTATCGTATTGTTGCAGATGAAGGGGTCTTAGCACTTT
GGAAAGGTGCAGGTCCTACTGTTGTGAGAGCTATGGCATTGAACATGGGC
ATGCTTGCCTCCTACGATCAAAGTGTTGAGTTTTTCAGAGATGCGTGTGG
CTTGTCTGAACTTCCTACAGTAATCGGGGCGAGTACAGTGTCAGGGTTCT
TTGCTTCAGCTTGCAGTTTACCCTTTGATTATGTCAAAACACAAATTCAG
AAAATGCAACCAGATGCTCAAGGAAAGTATCCATACACAGGCTCTATGGA
CTGTGCCATGAAAACCCTCAAGGCTGGTGGACCATTCAAATTTTACACTG
GTTTCCCTGTGTACTGTGTTCGGATTGCTCCTCATGTCATGATGACTTG
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