CV712802

Overview
NameCV712802
Unique NameCV712802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length729
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_RHILO (Chaperone protein dnaK OS=Rhizobium loti GN=dnaK PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.499e-82
Identity = 155/235 (65.96%), Postives = 192/235 (81.70%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHM 706
            DE VALGAAIQ G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI RNTTIPTKKSQVFSTA D+Q+ V I+V QGEREMA+DNK+LG+F+LVGIPPAPRG+PQIEVTFDIDANGIV VSAKDK TGKE QI I++SGGLS+ +IEKMVK+AE +A+ D +R+A+++ RNQA+  ++S EKSL EY +K+       I DA+A L+ A   D+  DI++K  A  +A  K+GQ M
Sbjct:  363 DEVVALGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQVFSTAEDSQSAVTIRVFQGEREMAADNKALGQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEHQIRIQASGGLSDADIEKMVKDAEANAETDKKRRAVVEARNQAEALVHSSEKSLKEYGDKVSEAERTAISDAIAALKTAAEGDDAADIEAKSQALAEASMKLGQAM 597          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_GEOMG (Chaperone protein dnaK OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dnaK PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 3.339e-82
Identity = 157/233 (67.38%), Postives = 187/233 (80.26%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQ 700
            DE VA+GA IQGG+LRGDVK++LLLDVTPLSLGIETLG + T+LI++NTTIP +KSQVFSTA+DNQ  V I VLQGEREMASDNK+LG FEL GIPPAPRG+PQIEVTFDIDANGIV VSAKD  TGKEQ I I +S GLS++EI+KMV+EAE HA  D +++ LI+ RN ADT  YS EKSL EY +KI  +  K+IE+AVA L+KAM  D+VD IK   DA  +A  K+ +
Sbjct:  363 DEVVAIGAGIQGGVLRGDVKDVLLLDVTPLSLGIETLGSVMTKLIDKNTTIPCRKSQVFSTASDNQPAVTIHVLQGEREMASDNKTLGNFELTGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKEQSIRITASSGLSKEEIDKMVREAESHAADDKKKRELIEARNHADTLAYSTEKSLKEYGDKIGDDEKKKIEEAVAALKKAMEGDDVDAIKQATDALTQASHKLAE 595          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_BARQU (Chaperone protein dnaK OS=Bartonella quintana GN=dnaK PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 3.339e-82
Identity = 153/235 (65.11%), Postives = 191/235 (81.28%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHM 706
            DE VA+GAAIQGG+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI RNTTIPTKKSQVFSTA DNQ  V I+V QGEREMA+DNK L +F+LVGIPPAPRG+PQIEVTFDIDANGIV VSAKDK TGKE QI I++SGGLS+ +IEKMVK+AE HA  D +R+  ++ RNQA+  I+S EKSL EY +KI +E  ++IE A++DL+ A+   + +++ +K+    +   K+GQ M
Sbjct:  363 DEVVAMGAAIQGGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQVFSTADDNQNAVTIRVFQGEREMANDNKLLAQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEHQIRIQASGGLSDADIEKMVKDAEEHAAEDKKRREGVEARNQAEALIHSTEKSLTEYGDKISTEEKEQIETAISDLKSALDGTDPEEVTAKMQKLAEVSMKLGQAM 597          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_BARBK (Chaperone protein dnaK OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=dnaK PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 3.339e-82
Identity = 152/235 (64.68%), Postives = 189/235 (80.43%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHM 706
            DE VA+GAAIQGG+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI RNTTIPTKKSQ FSTA DNQ  V I+V QGEREMA+DNK L +F+LVGIPPAPRG+PQIEVTFDIDANGIV VSAKDK TGKE QI I++SGGLS+ +IE MVK+AE HA  D +R+  ++ +NQA+  I+S EKSL EY +K+ +E   +IE A+ADL+  +  DN +++K+K+    +   K+GQ M
Sbjct:  363 DEVVAMGAAIQGGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQTFSTADDNQNAVTIRVFQGEREMANDNKLLAQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVSAKDKGTGKEHQIRIQASGGLSDADIENMVKDAESHAAEDKKRRENVEAKNQAEALIHSTEKSLTEYGDKVSAEDKGQIEAAIADLKAVLDGDNSEEVKAKMQKLAEVSMKLGQAM 597          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_RHORT (Chaperone protein dnaK OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=dnaK PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.361e-82
Identity = 153/244 (62.70%), Postives = 199/244 (81.56%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQ--HMAGGSGGG 727
            DE VA+GAAIQGG+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI+RNTTIPT+KSQ FSTA D+QT V I+V QGEREMA+DNK LG+F+LVG+P APRG+PQIEVTFDIDANGIV VSAKDKATGKEQ I I++SGGLS+++IE+MVKEAEL+A+ D +RK  ++ RN AD  I++ EK+L EY +KIP+E   ++E  +  L+  + +++ + IK+K DA  ++  K+G+  + AG S  G
Sbjct:  363 DEVVAMGAAIQGGVLKGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTRKSQTFSTAEDSQTAVTIRVFQGEREMAADNKMLGQFDLVGLPSAPRGVPQIEVTFDIDANGIVNVSAKDKATGKEQAIRIQASGGLSDNDIERMVKEAELNAEADRKRKEAVEARNHADGLIHATEKNLKEYGDKIPAEDKAKVEGDLTALKAVLDSEDAESIKAKTDALMQSAMKLGEAAYSAGQSAEG 606          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_BEII9 (Chaperone protein dnaK OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=dnaK PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.361e-82
Identity = 156/243 (64.20%), Postives = 192/243 (79.01%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHM--AGGSGG 724
            DE VA+GAA+Q G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI+RNTTIPTKKSQVFSTA DNQT V I+V QGEREMA+DNK LG+F+LVGIP APRG+PQIEVTFDIDANGIV V+AKDKAT KEQQI I++SGGLSE +I+KMVKEAE HA  D  R+ L+D +N  +  I+S EKSL E+  K+       I+ A+A L+  +  +N++ IK+K DA  +A  K+G+ M  AG  GG
Sbjct:  363 DEVVAIGAAVQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAEDNQTAVTIRVFQGEREMAADNKLLGQFDLVGIPGAPRGVPQIEVTFDIDANGIVNVTAKDKATNKEQQIRIQASGGLSEADIDKMVKEAEQHAAEDKVRRELVDAKNHGEAIIHSTEKSLAEFGTKVAESDKSTIDAAIAALKTELAGENLEGIKAKTDALVQASMKLGEAMYKAGAEGG 605          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_BART1 (Chaperone protein dnaK OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=dnaK PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 7.438e-82
Identity = 152/235 (64.68%), Postives = 190/235 (80.85%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHM 706
            DE VA+GAAIQGG+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI RNTTIPTKKSQVFSTA DNQ+ V I+V QGEREMASDNK L +F+LVGIPPAPRG+PQIEVTFDIDANGIV VSAKDK TGKE QI I++SGGLS+ +IEKMVK+AE HA  D +R+  ++ +NQA+  I+S EKSL EY +K+  E   +IE A++DL+ A+   + +++ +K+    +   K+GQ M
Sbjct:  363 DEVVAMGAAIQGGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQVFSTADDNQSAVTIRVFQGEREMASDNKLLAQFDLVGIPPAPRGIPQIEVTFDIDANGIVNVSAKDKGTGKEHQIRIQASGGLSDADIEKMVKDAEEHAAEDKKRREGVEAKNQAEALIHSTEKSLNEYGDKVSVEEKGQIEAAISDLKSALEGSDTEEVTTKMQKLAEVSMKLGQAM 597          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_RHOPB (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain BisB18) GN=dnaK PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 9.715e-82
Identity = 150/235 (63.83%), Postives = 191/235 (81.28%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHM 706
            DE VA+GAAIQ G+L+GDVK++LLLDVTPLSLGIETLGG+FTR+I RNTTIPTKKSQVFSTA DNQ  V I+V QGEREMA+DNK LG+F+L+GIPP+PRGMPQIEVTFDIDANGIV VSA+DKATGKEQQI I++SGGLSE +I KMVK+AE++A  D +R+  +D +N AD  +++ EK+L E+  K+     + IEDA+ DLR+A+  D+ + IK+K +   +A  K+G+ M
Sbjct:  363 DEVVAIGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRIIERNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKILGQFDLMGIPPSPRGMPQIEVTFDIDANGIVNVSARDKATGKEQQIRIQASGGLSEADINKMVKDAEINAAEDKKRREAVDAKNHADALVHTTEKALAEHGAKVEEGERRAIEDALGDLREALKGDDAEAIKAKSNTLAQASMKLGEAM 597          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_RHOPS (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain BisB5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.269e-81
Identity = 149/235 (63.40%), Postives = 191/235 (81.28%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHM 706
            DE VA+GAAIQ G+L+GDVK++LLLDVTPLSLGIETLGG+FTR+I RNTTIPTKKSQVFSTA DNQ  V I+V QGEREMA+DNK LG+F+L+GIPP+PRGMPQIEVTFDIDANGIV VSAKDKAT KEQQI I++SGGLS+ +I+KMVK+AE +A  D  R+  +D +N AD  ++S EK+L E+  K+     + IEDA++DLR+++ +D+ + IK+K +   +A  K+G+ M
Sbjct:  363 DEVVAIGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRIIERNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKILGQFDLMGIPPSPRGMPQIEVTFDIDANGIVNVSAKDKATSKEQQIRIQASGGLSDADIDKMVKDAEANASEDKRRREAVDAKNHADALVHSTEKALAEHGSKVEDSERRAIEDALSDLRESLKSDDAEAIKTKTNTLAQASMKLGEAM 597          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_METPB (Chaperone protein dnaK OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=dnaK PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.269e-81
Identity = 151/239 (63.18%), Postives = 194/239 (81.17%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHMAGGS 718
            DE VA+GAA+Q G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI+RNTTIPTKKSQVFSTA DNQ  V I+V QGEREMA+DNK LG+F+LVGIPPAPRGMPQIEVTFDIDANGIV V+AKDKAT KE QI I++SGGLS+ +IEKMVK+AE +A+ D +R+ L++++NQ ++ I++ EKS+ EY +K+ +     IE A+A LR A+  D+ + IK+K +   +A  K+G+ M   S
Sbjct:  363 DEVVAIGAAVQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKLLGQFDLVGIPPAPRGMPQIEVTFDIDANGIVNVTAKDKATNKEHQIRIQASGGLSDADIEKMVKDAEANAEADKKRRELVEVKNQGESLIHATEKSVSEYGDKVSAADKGAIESAIAALRTALEGDDAEGIKAKTNDLMQASMKLGEAMYAAS 601          
The following BLAST results are available for this feature:
BLAST of CV712802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_RHILO1.499e-8265.96Chaperone protein dnaK OS=Rhizobium loti GN=dnaK P... [more]
DNAK_GEOMG3.339e-8267.38Chaperone protein dnaK OS=Geobacter metallireducen... [more]
DNAK_BARQU3.339e-8265.11Chaperone protein dnaK OS=Bartonella quintana GN=d... [more]
DNAK_BARBK3.339e-8264.68Chaperone protein dnaK OS=Bartonella bacilliformis... [more]
DNAK_RHORT4.361e-8262.70Chaperone protein dnaK OS=Rhodospirillum rubrum (s... [more]
DNAK_BEII94.361e-8264.20Chaperone protein dnaK OS=Beijerinckia indica subs... [more]
DNAK_BART17.438e-8264.68Chaperone protein dnaK OS=Bartonella tribocorum (s... [more]
DNAK_RHOPB9.715e-8263.83Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_RHOPS1.269e-8163.40Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_METPB1.269e-8163.18Chaperone protein dnaK OS=Methylobacterium populi ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001O16_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001O16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712802 ID=CV712802; Name=CV712802; organism=Citrus sinensis; type=EST; length=729bp
TGATGAGGCAGTTGCCCTTGGTGCTGCTATTCAAGGTGGTATTCTTCGTG
GCGACGTCAAAGAGTTGCTTCTCTTGGATGTTACACCTCTGTCACTGGGT
ATTGAGACACTAGGTGGTATCTTCACCAGGTTGATCAATCGCAACACAAC
TATTCCAACAAAGAAGAGTCAGGTCTTCTCAACAGCAGCTGATAACCAGA
CTCAGGTGGGGATTAAGGTGCTTCAAGGTGAGCGCGAAATGGCATCTGAC
AACAAGTCCCTAGGAGAGTTTGAACTTGTGGGCATTCCACCAGCTCCTAG
AGGCATGCCTCAGATTGAGGTCACATTTGACATTGATGCCAATGGTATTG
TCACTGTTTCTGCAAAGGACAAGGCCACTGGCAAGGAACAGCAAATTACC
ATCCGCTCATCTGGAGGTCTATCAGAGGATGAAATTGAGAAGATGGTTAA
GGAAGCAGAATTGCATGCCCAGAGGGATAATGAAAGAAAAGCTCTGATTG
ATATCAGAAACCAGGCGGATACCACCATCTACAGCATTGAGAAGAGCTTG
GGTGAGTACAGAGAAAAGATTCCCAGTGAGGTTGCAAAAGAGATTGAGGA
TGCTGTTGCAGATTTGAGAAAGGCCATGGGAGCTGACAATGTTGATGATA
TCAAGTCCAAGCTTGATGCAGCTAACAAAGCTGTCTCTAAGATTGGACAA
CACATGGCTGGTGGTTCTGGTGGTGGTGC
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