CV712802

Overview
NameCV712802
Unique NameCV712802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length729
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_METS4 (Chaperone protein dnaK OS=Methylobacterium sp. (strain 4-46) GN=dnaK PE=2 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 2.393e-80
Identity = 147/242 (60.74%), Postives = 193/242 (79.75%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHMAGGSGGG 727
            DE VA+GAA+Q G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI+RNTTIPTKKSQVFSTA DNQ  V I+V QGEREMA+DNK LG+F+LVGIPPAPRG+PQIEVTFDIDANGIV V+AKDKATGKE QI I++SGGLS+ EI++MV+EAE +A  D +R+ L++++NQ ++ +++ EKS+ EY +K+       I  A+  LR+A+  ++V+ IK++     +A  K+G+ M     GG
Sbjct:  363 DEVVAIGAAVQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVTAKDKATGKEHQIRIQASGGLSDTEIQRMVQEAEANAAEDKKRRELVEVKNQGESLVHATEKSVKEYGDKVSESDRAGISTAIDALRQALAGEDVETIKARTTDLMQASMKLGEAMYAAQAGG 604          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_AGRT5 (Chaperone protein dnaK OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=dnaK PE=2 SV=2)

HSP 1 Score: 298.516 bits (763), Expect = 2.393e-80
Identity = 152/235 (64.68%), Postives = 192/235 (81.70%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGA--DNVDDIKSKLDAANKAVSKIGQ 700
            DE VA+GAAIQ G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI+RNTTIPTKKSQ FSTA DNQ+ V I+V QGEREMA DNK LG+F+LVG+PP+PRG+PQIEVTFDIDANGIV VSAKDK TGKEQQI I++SGGLS+ +IEKMVK+AE +A+ D +R+A ++ +NQA++ I+S EKS+ EY +K+     K IEDA+A L+ A+ A   + DDI++K     +   K+GQ
Sbjct:  363 DEVVAMGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQTFSTAEDNQSAVTIRVSQGEREMAQDNKLLGQFDLVGLPPSPRGVPQIEVTFDIDANGIVQVSAKDKGTGKEQQIRIQASGGLSDADIEKMVKDAEANAEADKKRRAGVEAKNQAESLIHSTEKSVKEYGDKVSETDRKAIEDAIASLKTAVEAAEPDADDIQAKTQTLMEVSMKLGQ 597          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_SINMW (Chaperone protein dnaK OS=Sinorhizobium medicae (strain WSM419) GN=dnaK PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 3.125e-80
Identity = 154/235 (65.53%), Postives = 191/235 (81.28%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVD--DIKSKLDAANKAVSKIGQ 700
            DE VA+GAAIQ G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI RNTTIPTKKSQVFSTA DNQ+ V I+V QGEREMA+DNK LG+F+LVGIPPAPRG+PQIEVTFDIDANGIV VSAKDK TGKE QI I++SGGLS+ EIEKMVK+AE +A+ D +R+  ++ +NQA++ ++S EKSL E+ +K+     K IEDA+A L+ A+ A   D  DIK+K +   +   K+GQ
Sbjct:  363 DEVVAMGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQVFSTADDNQSAVTIRVSQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVQVSAKDKGTGKEHQIRIQASGGLSDAEIEKMVKDAEANAEADKKRREGVEAKNQAESLVHSSEKSLQEHGDKVSETDRKAIEDAIAALKSAVEASEPDAEDIKAKTNTLMEVSMKLGQ 597          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_RHILW (Chaperone protein dnaK OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=dnaK PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 3.125e-80
Identity = 154/235 (65.53%), Postives = 186/235 (79.15%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGA--DNVDDIKSKLDAANKAVSKIGQ 700
            DE VALGAAIQ G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI RNTTIPTKKSQ FSTA DNQ  V I+V QGEREMA+DNK LG+F+LVG+PP+PRGMPQIEVTFDIDANGIV VSAKDK TGKEQQI I++SGGLS+ +IEKMVK+AE HA  D +R+  ++ RNQA++ I+S EKSL +Y +K+       I DA+A L+ A  A   + DDIK+K     +   K+GQ
Sbjct:  363 DEVVALGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQTFSTAEDNQQAVTIRVSQGEREMAADNKLLGQFDLVGLPPSPRGMPQIEVTFDIDANGIVQVSAKDKGTGKEQQIRIQASGGLSDADIEKMVKDAEAHATEDKKRREAVEARNQAESLIHSTEKSLKDYGDKVSEADRTAISDAIAALKTASEATEPDADDIKAKTQTLMEVSMKLGQ 597          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_RHIL3 (Chaperone protein dnaK OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=dnaK PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 3.125e-80
Identity = 154/235 (65.53%), Postives = 186/235 (79.15%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGAD--NVDDIKSKLDAANKAVSKIGQ 700
            DE VALGAAIQ G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI RNTTIPTKKSQ FSTA DNQ  V I+V QGEREMA+DNK LG+F+LVG+PP+PRGMPQIEVTFDIDANGIV VSAKDK TGKEQQI I++SGGLS+ +IEKMVK+AE HA  D +R+  ++ RNQA++ I+S EKSL +Y +K+       I DA+A L+ A  A   + DDIK+K     +   K+GQ
Sbjct:  363 DEVVALGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIERNTTIPTKKSQTFSTAEDNQQAVTIRVSQGEREMAADNKLLGQFDLVGLPPSPRGMPQIEVTFDIDANGIVQVSAKDKGTGKEQQIRIQASGGLSDADIEKMVKDAEAHATEDKKRREAVEARNQAESLIHSSEKSLKDYGDKVSEADRTAISDAIAALKTASEASEPDADDIKAKTQTLMEVSMKLGQ 597          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_AZOC5 (Chaperone protein dnaK OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=dnaK PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 3.125e-80
Identity = 150/242 (61.98%), Postives = 192/242 (79.34%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHMAGGSGGG 727
            DE VA+GAAIQ G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI+RNTTIPTKKSQVFSTA D QT V I+V QGEREMA+DNK LG+F+LVGIPPAPRG+PQIEVTFDIDANGIV VSAKDK TGKEQQI I++SGGL++ +IEKMVK+AE HA  D +R+AL + +N  +  ++S EK+L E+ +K+ +     IE A+ +L+ A+  ++ + I++K  A  +A  K+G+ M     GG
Sbjct:  363 DEVVAIGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAEDGQTAVTIRVFQGEREMAADNKILGQFDLVGIPPAPRGVPQIEVTFDIDANGIVQVSAKDKGTGKEQQIRIQASGGLNDADIEKMVKDAESHAADDKKRRALAEAKNHGEALVHSTEKALSEHGDKVGAAEKGAIESALGELKTALTTEDAEAIQAKTQALAQASLKLGEAMYSAQQGG 604          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_METNO (Chaperone protein dnaK OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=dnaK PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 4.081e-80
Identity = 149/241 (61.83%), Postives = 193/241 (80.08%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHMAGGSGG 724
            DE VA+GAA+Q G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI+RNTTIPTKKSQVFSTA DNQ  V I+V QGEREMA+DNK LG+F+LVGIPPAPRG+PQIEVTFDIDANGIV V+AKDKATGKE QI I++SGGLSE EI++MV+EAE +A  D +R+ L++++NQ ++ I++ EKS+ EY +K+       I  A+  LR+A+  ++V+ IK++     +A  K+G+ M   S G
Sbjct:  363 DEVVAIGAAVQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDIDANGIVNVTAKDKATGKEHQIRIQASGGLSETEIQRMVQEAEANAAEDKKRRELVEVKNQGESLIHATEKSVKEYGDKVSEADKAGITTAIDALRQALAGEDVETIKARTTDLMQASMKLGEAMYAASQG 603          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_EHRCJ (Chaperone protein dnaK OS=Ehrlichia canis (strain Jake) GN=dnaK PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 4.081e-80
Identity = 154/242 (63.64%), Postives = 190/242 (78.51%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMG---ADNVDDIKSKLDAANKAVSKIGQHMAGGS 718
            DE VA+GAAIQG IL GDV+++LLLDVTPLSLGIETLGG+FT LI RNTTIPTKKSQVFSTA D QT V IKV QGER+MA+DNK LG+F L GIP APRGMPQIEVTFDIDANGIV VSAKDKA+GKEQ I I+SSGGLS+DEI++M+KEAE  A  D +RK  I+++N  +  ++S EKSL EY +KIP+    EIE+A+ D+R A+G    ++VD ++ K+D   K   K+G+ + G +
Sbjct:  358 DEVVAIGAAIQGSILAGDVRDVLLLDVTPLSLGIETLGGVFTPLIERNTTIPTKKSQVFSTAEDGQTAVTIKVYQGERKMAADNKLLGQFSLEGIPSAPRGMPQIEVTFDIDANGIVHVSAKDKASGKEQAIKIQSSGGLSDDEIQRMIKEAEQKAGEDEKRKKFIELKNNGENLVHSTEKSLNEYGDKIPNSDRLEIENAIRDVRDALGNSDVESVDILQQKVDHLMKVSMKLGEALYGNA 599          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_MARMM (Chaperone protein dnaK OS=Maricaulis maris (strain MCS10) GN=dnaK PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 5.331e-80
Identity = 148/235 (62.98%), Postives = 190/235 (80.85%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHM 706
            DE VA+GAAIQ G+L+GDVK++LLLDVTPLSLGIETLGG+FTRLI+RNTTIPTKKSQ FSTA DNQT V I+V QGEREMA+DNK LG+F+LVGIPP+PRG+PQIEVTFDIDANGIV VSAKDKATGKEQQI I++SGGLS+D+IE+MVK+AE +A  D ++K L++  N A+  I+  EK L E+ +K+P E    I+ A+ +L++    ++++ I+ K  A  +A  K+G+ M
Sbjct:  363 DEVVAMGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQTFSTADDNQTAVTIRVSQGEREMAADNKLLGQFDLVGIPPSPRGLPQIEVTFDIDANGIVNVSAKDKATGKEQQIRIQASGGLSDDDIEQMVKDAEANADADKKKKELVEAHNGAEAMIHQTEKQLEEFGDKVPGEDKDAIDAALTELKEVKDGEDLEAIQQKTQALVQAAMKLGEAM 597          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_LACGA (Chaperone protein dnaK OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=dnaK PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 5.331e-80
Identity = 146/241 (60.58%), Postives = 191/241 (79.25%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHMAGGSGG 724
            DEAVALGAAIQGG++ GDVK+++LLDVTPLSLGIET+GG+FT+LI+RNTTIPT KSQ+FSTAADNQ  V + VLQGER MA+D+K+LG FEL  IPPAPRG+PQI+VTFDID NGIV VSAKD  TGKEQ+ITI+SS GLS++EI+KM K+AE HA+ D +RK  +D+RN+ D  I++ EK+L E + K+P    K ++DA+  L+KA   +N+D++K K +A +KA   +   +   +GG
Sbjct:  339 DEAVALGAAIQGGVISGDVKDIVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQIFSTAADNQPAVDVHVLQGERPMAADDKTLGRFELTDIPPAPRGVPQIQVTFDIDKNGIVNVSAKDMGTGKEQKITIKSSSGLSDEEIKKMQKDAEEHAEEDKKRKEEVDLRNEVDQLIFTTEKTLKETKGKVPETETKNVQDALDALKKAQKDNNLDEMKEKKEALSKAAQDLAVKLYQQNGG 579          
The following BLAST results are available for this feature:
BLAST of CV712802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_METS42.393e-8060.74Chaperone protein dnaK OS=Methylobacterium sp. (st... [more]
DNAK_AGRT52.393e-8064.68Chaperone protein dnaK OS=Agrobacterium tumefacien... [more]
DNAK_SINMW3.125e-8065.53Chaperone protein dnaK OS=Sinorhizobium medicae (s... [more]
DNAK_RHILW3.125e-8065.53Chaperone protein dnaK OS=Rhizobium leguminosarum ... [more]
DNAK_RHIL33.125e-8065.53Chaperone protein dnaK OS=Rhizobium leguminosarum ... [more]
DNAK_AZOC53.125e-8061.98Chaperone protein dnaK OS=Azorhizobium caulinodans... [more]
DNAK_METNO4.081e-8061.83Chaperone protein dnaK OS=Methylobacterium nodulan... [more]
DNAK_EHRCJ4.081e-8063.64Chaperone protein dnaK OS=Ehrlichia canis (strain ... [more]
DNAK_MARMM5.331e-8062.98Chaperone protein dnaK OS=Maricaulis maris (strain... [more]
DNAK_LACGA5.331e-8060.58Chaperone protein dnaK OS=Lactobacillus gasseri (s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_0001O16_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001O16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712802 ID=CV712802; Name=CV712802; organism=Citrus sinensis; type=EST; length=729bp
TGATGAGGCAGTTGCCCTTGGTGCTGCTATTCAAGGTGGTATTCTTCGTG
GCGACGTCAAAGAGTTGCTTCTCTTGGATGTTACACCTCTGTCACTGGGT
ATTGAGACACTAGGTGGTATCTTCACCAGGTTGATCAATCGCAACACAAC
TATTCCAACAAAGAAGAGTCAGGTCTTCTCAACAGCAGCTGATAACCAGA
CTCAGGTGGGGATTAAGGTGCTTCAAGGTGAGCGCGAAATGGCATCTGAC
AACAAGTCCCTAGGAGAGTTTGAACTTGTGGGCATTCCACCAGCTCCTAG
AGGCATGCCTCAGATTGAGGTCACATTTGACATTGATGCCAATGGTATTG
TCACTGTTTCTGCAAAGGACAAGGCCACTGGCAAGGAACAGCAAATTACC
ATCCGCTCATCTGGAGGTCTATCAGAGGATGAAATTGAGAAGATGGTTAA
GGAAGCAGAATTGCATGCCCAGAGGGATAATGAAAGAAAAGCTCTGATTG
ATATCAGAAACCAGGCGGATACCACCATCTACAGCATTGAGAAGAGCTTG
GGTGAGTACAGAGAAAAGATTCCCAGTGAGGTTGCAAAAGAGATTGAGGA
TGCTGTTGCAGATTTGAGAAAGGCCATGGGAGCTGACAATGTTGATGATA
TCAAGTCCAAGCTTGATGCAGCTAACAAAGCTGTCTCTAAGATTGGACAA
CACATGGCTGGTGGTTCTGGTGGTGGTGC
back to top