CV712802

Overview
NameCV712802
Unique NameCV712802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length729
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_PARDP (Chaperone protein dnaK OS=Paracoccus denitrificans (strain Pd 1222) GN=dnaK PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 5.894e-79
Identity = 147/233 (63.09%), Postives = 189/233 (81.12%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQ 700
            DE VALGAAIQ G+L+GDVK+++LLDVTPLSLGIETLGG+FTRLI+RNTTIPTKKSQ+FSTA DNQ  V I+V QGEREMA+DNK LG+F L  IPPAPRGMPQIEVTFDIDANGIV+VSAKDK TGKEQ+ITI++SGGLS+DEI++MVK+AE +A+ D +RK L++ +NQA++ I++ +KSL E+ +K+     + IE AV  L +A+ +++   IK  +     A  K+G+
Sbjct:  364 DEVVALGAAIQAGVLQGDVKDVVLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQIFSTAEDNQNAVTIRVFQGEREMAADNKLLGQFNLENIPPAPRGMPQIEVTFDIDANGIVSVSAKDKGTGKEQKITIQASGGLSDDEIDRMVKDAEANAEADKQRKELVEAKNQAESLIHTTKKSLEEHGDKVDGSTVEAIELAVGALEEALKSEDAGKIKGGIQNLMDASMKLGE 596          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSM (Chaperone protein dnaK OS=Geobacter sp. (strain M21) GN=dnaK PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 5.894e-79
Identity = 149/233 (63.95%), Postives = 186/233 (79.83%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQ 700
            DE VA+GAAIQGG+LRGDVK++LLLDVTPLSLGIETLGG+ T+LI++N+TIP +KSQVFSTAADNQ  V I VLQGEREMA+DNK+LG FEL GIP APRG+PQIEVTFDIDANGIV VSAKD  TGKEQ I I +S GLS++E+EKMV+EAE HA  D +++ LI+ +NQAD  IY  EKSL E+ +KI +   ++IE+ VA L+KA+   + D+IK   D+  +A  K+ +
Sbjct:  363 DEVVAIGAAIQGGVLRGDVKDVLLLDVTPLSLGIETLGGVLTKLIDKNSTIPCRKSQVFSTAADNQPAVSIHVLQGEREMAADNKTLGNFELSGIPSAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKEQSIRITASSGLSKEEVEKMVREAEAHAADDKKKRELIEAKNQADNLIYQTEKSLTEFGDKIDASEKQKIEEGVAALKKALEGSDADEIKKASDSLMQASHKLAE 595          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_GEOLS (Chaperone protein dnaK OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=dnaK PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 5.894e-79
Identity = 150/235 (63.83%), Postives = 182/235 (77.45%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHM 706
            DE VA+GA IQGG+L+GDVK++LLLDVTPLSLGIETLGG+ TRLI +NTTIP +KSQ FSTAADNQ  V I VLQGEREMA DNK+LG FEL GIPPAPRG+PQIEVTFDIDANGIV VSAKD  TGKEQ I I +S GLS++EI+KMVK+AE HA  D +++  I+ RNQAD+ IYS EKSL E  +K+ +     IE+ +ADL+K M +D+ + IK   D   +A  K+ + M
Sbjct:  363 DEVVAIGAGIQGGVLKGDVKDVLLLDVTPLSLGIETLGGVLTRLIEKNTTIPCRKSQTFSTAADNQPAVSIHVLQGEREMARDNKTLGNFELTGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKEQSIRITASSGLSKEEIDKMVKDAESHAAEDKKKREAIEARNQADSMIYSTEKSLKEVGDKVDAVEKGTIENKIADLKKVMDSDDAEVIKKATDELAQAAHKLAEAM 597          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_RICRS (Chaperone protein dnaK OS=Rickettsia rickettsii (strain Sheila Smith) GN=dnaK PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.005e-78
Identity = 151/235 (64.26%), Postives = 188/235 (80.00%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHM 706
            DE VALGAAIQGG+L  +V ++LLLDVTPLSLGIETLGG+FTRLI+RNTTIPTKKSQVFSTA DNQ  V I+V QGEREMA DNK LG+F L GIPPAPRG+PQIEVTFDIDANGIV VSAKDKA+GKEQ++TI++SGGLS+ EIE+MVK+AE +A  D +RK LI+ +N AD+ +YS EK+L EY +K+ S+    +E+A+A L+  + +++   IK K  +   A  KIG+ M
Sbjct:  362 DEVVALGAAIQGGVLNKEVTDILLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTADDNQHAVTIRVFQGEREMAKDNKLLGQFNLEGIPPAPRGLPQIEVTFDIDANGIVHVSAKDKASGKEQKVTIQASGGLSDAEIEQMVKDAEQNADEDKKRKELIEAKNAADSLVYSTEKTLTEYGDKLSSDDKGAVEEALAALKAVLESEDTALIKEKTASLTAASMKIGEAM 596          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_RICRO (Chaperone protein dnaK OS=Rickettsia rickettsii (strain Iowa) GN=dnaK PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.005e-78
Identity = 151/235 (64.26%), Postives = 188/235 (80.00%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHM 706
            DE VALGAAIQGG+L  +V ++LLLDVTPLSLGIETLGG+FTRLI+RNTTIPTKKSQVFSTA DNQ  V I+V QGEREMA DNK LG+F L GIPPAPRG+PQIEVTFDIDANGIV VSAKDKA+GKEQ++TI++SGGLS+ EIE+MVK+AE +A  D +RK LI+ +N AD+ +YS EK+L EY +K+ S+    +E+A+A L+  + +++   IK K  +   A  KIG+ M
Sbjct:  362 DEVVALGAAIQGGVLNKEVTDILLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTADDNQHAVTIRVFQGEREMAKDNKLLGQFNLEGIPPAPRGLPQIEVTFDIDANGIVHVSAKDKASGKEQKVTIQASGGLSDAEIEQMVKDAEQNADEDKKRKELIEAKNAADSLVYSTEKTLTEYGDKLSSDDKGAVEEALAALKAVLESEDTALIKEKTASLTAASMKIGEAM 596          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_METTH (Chaperone protein dnaK OS=Methanobacterium thermoautotrophicum GN=dnaK PE=3 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.005e-78
Identity = 145/231 (62.77%), Postives = 185/231 (80.09%), Query Frame = 2
Query:    5 EAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIG 697
            E VA+GAAIQGG+L G++K+L+LLDVTPLSLGIETLGG+FT+LI RNTTIPT+KSQ+FSTAADNQT V I VLQGER MA+DN SLG F+LVGIPPAPRG+PQIEVTFDIDANGI+ VSAKD  TGKEQ ITI +   LSE+EI++ ++EA+ HA+ D  ++  I+IRN AD+ IY+ EK+L E  +K+P+E  +E+E  V +LR+ +  D++  IKSK +   K V +IG
Sbjct:  348 ECVAMGAAIQGGVLAGEIKDLVLLDVTPLSLGIETLGGVFTKLIERNTTIPTRKSQIFSTAADNQTSVDIHVLQGERPMAADNTSLGRFQLVGIPPAPRGVPQIEVTFDIDANGILNVSAKDLGTGKEQAITITAPNKLSEEEIKQKIEEAKKHAEEDRRKQEEIEIRNNADSMIYTAEKTLDELGDKVPAEKKEEVEKQVRELRELIAGDDIQAIKSKTEELTKTVQEIG 578          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_JANSC (Chaperone protein dnaK OS=Jannaschia sp. (strain CCS1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.005e-78
Identity = 144/233 (61.80%), Postives = 188/233 (80.69%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQ 700
            DE VA+GAAIQ G+L+GDVK+++LLDVTPLS+GIETLGG+FTRLI+RNTTIPTKKSQ+FSTA DNQ+ V ++V QGEREMA+DNK LG+F L GIPPAPRG+PQIEVTFDIDANGIV+V AKDK TGKEQQITI++SGGLS+D+IE MV+EAE +A+ D +RK L++ RNQA++ ++  EKSL E+ EK+     + IE A+  L++ +  D+   IK  +    +A  ++G+
Sbjct:  363 DEVVAMGAAIQAGVLQGDVKDVVLLDVTPLSMGIETLGGVFTRLIDRNTTIPTKKSQIFSTADDNQSAVTLRVFQGEREMAADNKILGQFNLEGIPPAPRGVPQIEVTFDIDANGIVSVGAKDKGTGKEQQITIQASGGLSDDDIEAMVREAEENAEADKDRKDLVETRNQAESLVHGTEKSLEEHGEKVDPSTVEAIELALGALKETLETDDTAKIKGGIQNVTEAAMRLGE 595          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_RICPR (Chaperone protein dnaK OS=Rickettsia prowazekii GN=dnaK PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.313e-78
Identity = 151/235 (64.26%), Postives = 187/235 (79.57%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHM 706
            DE VALGAAIQGG+L  +V ++LLLDVTPLSLGIETLGG+FTRLI+RNTTIP+KKSQVFSTA DNQ  V I+V QGEREMA DNK LG+F L GIPPAPRG+PQIEVTFDIDANGIV VSAKDKA+GKEQ++TI++SGGLS+ EIE+MVK+AE +A  D +RK LI+ +N AD+ +YS EK+L EY +K+ SE    +E+A+  L+ A+ +++   IK K      A  KIG+ M
Sbjct:  362 DEVVALGAAIQGGVLNKEVTDILLLDVTPLSLGIETLGGVFTRLIDRNTTIPSKKSQVFSTADDNQHAVTIRVFQGEREMAKDNKLLGQFNLEGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKASGKEQKVTIQASGGLSDAEIEQMVKDAEHNADEDKKRKELIETKNAADSLVYSTEKTLREYGDKLSSEEKGTVEEALTSLKAALESEDASLIKEKTGNLTAANMKIGEAM 596          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_ACICJ (Chaperone protein dnaK OS=Acidiphilium cryptum (strain JF-5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.313e-78
Identity = 148/235 (62.98%), Postives = 186/235 (79.15%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHM 706
            DE VA+GAAIQG +L+GDVK++LLLDVTPLSLGIETLGG+FTRLI+RNTTIPTKKSQ FSTA DNQT V IKV QGEREMA+DNK LG F+L GIPPAPRG+PQIEVTFDIDANGIV+VSAKDKATGKEQQI I++SGGLS+ +IE+MVK+AE +A  D  ++ L+D RN AD  ++  EK+L +   K+ ++   E E A+A +R A+   +++ IKS  +   +   +IG+ M
Sbjct:  363 DEVVAIGAAIQGAVLKGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQTFSTADDNQTAVTIKVYQGEREMAADNKLLGNFDLTGIPPAPRGVPQIEVTFDIDANGIVSVSAKDKATGKEQQIRIQASGGLSDTDIERMVKDAEANAAADKAKRELVDARNHADGLVHQTEKTLKDNEGKVSAQDKGEAEAAIAAVRSALEGSDLEAIKSATERLTQVAMRIGEAM 597          
BLAST of CV712802 vs. ExPASy Swiss-Prot
Match: DNAK_MAGSM (Chaperone protein dnaK OS=Magnetococcus sp. (strain MC-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.715e-78
Identity = 145/235 (61.70%), Postives = 189/235 (80.43%), Query Frame = 2
Query:    2 DEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKSLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIEKMVKEAELHAQRDNERKALIDIRNQADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRKAMGADNVDDIKSKLDAANKAVSKIGQHM 706
            DE VA+GAAIQGG+L+G+V+++LLLDVTPLSLGIETLGG+FT+LI +NTT+PT+KSQVFSTAADNQ+ V I+V QGEREM SDNK+LG+F+LVGI PAPRGMPQIEVTFDIDANG+V VSAKDK TGKEQ I I +SGGL+ +EI++MV EAE HA+ D +++ALI+ RN AD+ +YS EKSL E+ +K+   +  +I  A+ DL+  M  ++ + I SK  A  +   K+G+ +
Sbjct:  363 DEVVAIGAAIQGGVLKGEVQDVLLLDVTPLSLGIETLGGVFTKLIEKNTTVPTRKSQVFSTAADNQSAVTIRVAQGEREMFSDNKTLGQFDLVGIAPAPRGMPQIEVTFDIDANGMVHVSAKDKGTGKEQSIHIEASGGLTSEEIDRMVHEAESHAEEDAKKRALIEARNNADSLVYSSEKSLKEHSDKLDDALKNQITAAIEDLKAVMPKEDPEAISSKTQALMELSMKMGEQI 597          
The following BLAST results are available for this feature:
BLAST of CV712802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_PARDP5.894e-7963.09Chaperone protein dnaK OS=Paracoccus denitrificans... [more]
DNAK_GEOSM5.894e-7963.95Chaperone protein dnaK OS=Geobacter sp. (strain M2... [more]
DNAK_GEOLS5.894e-7963.83Chaperone protein dnaK OS=Geobacter lovleyi (strai... [more]
DNAK_RICRS1.005e-7864.26Chaperone protein dnaK OS=Rickettsia rickettsii (s... [more]
DNAK_RICRO1.005e-7864.26Chaperone protein dnaK OS=Rickettsia rickettsii (s... [more]
DNAK_METTH1.005e-7862.77Chaperone protein dnaK OS=Methanobacterium thermoa... [more]
DNAK_JANSC1.005e-7861.80Chaperone protein dnaK OS=Jannaschia sp. (strain C... [more]
DNAK_RICPR1.313e-7864.26Chaperone protein dnaK OS=Rickettsia prowazekii GN... [more]
DNAK_ACICJ1.313e-7862.98Chaperone protein dnaK OS=Acidiphilium cryptum (st... [more]
DNAK_MAGSM1.715e-7861.70Chaperone protein dnaK OS=Magnetococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001O16_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001O16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712802 ID=CV712802; Name=CV712802; organism=Citrus sinensis; type=EST; length=729bp
TGATGAGGCAGTTGCCCTTGGTGCTGCTATTCAAGGTGGTATTCTTCGTG
GCGACGTCAAAGAGTTGCTTCTCTTGGATGTTACACCTCTGTCACTGGGT
ATTGAGACACTAGGTGGTATCTTCACCAGGTTGATCAATCGCAACACAAC
TATTCCAACAAAGAAGAGTCAGGTCTTCTCAACAGCAGCTGATAACCAGA
CTCAGGTGGGGATTAAGGTGCTTCAAGGTGAGCGCGAAATGGCATCTGAC
AACAAGTCCCTAGGAGAGTTTGAACTTGTGGGCATTCCACCAGCTCCTAG
AGGCATGCCTCAGATTGAGGTCACATTTGACATTGATGCCAATGGTATTG
TCACTGTTTCTGCAAAGGACAAGGCCACTGGCAAGGAACAGCAAATTACC
ATCCGCTCATCTGGAGGTCTATCAGAGGATGAAATTGAGAAGATGGTTAA
GGAAGCAGAATTGCATGCCCAGAGGGATAATGAAAGAAAAGCTCTGATTG
ATATCAGAAACCAGGCGGATACCACCATCTACAGCATTGAGAAGAGCTTG
GGTGAGTACAGAGAAAAGATTCCCAGTGAGGTTGCAAAAGAGATTGAGGA
TGCTGTTGCAGATTTGAGAAAGGCCATGGGAGCTGACAATGTTGATGATA
TCAAGTCCAAGCTTGATGCAGCTAACAAAGCTGTCTCTAAGATTGGACAA
CACATGGCTGGTGGTTCTGGTGGTGGTGC
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