EY692109

Overview
NameEY692109
Unique NameEY692109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_THESM (30S ribosomal protein S3P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps3p PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.195e-15
Identity = 50/130 (38.46%), Postives = 68/130 (52.31%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 384
            ++ N    A  QA  L   L  G+  RRA Y  +R IM +GA+G E+ +SGKL  +RAKS++F  GY+   G P    +       LL+ GVLG+KV IM          P   LPD + I   P++EEV
Sbjct:   84 EIKNSYFNAKVQATRLAQALERGVHFRRAAYAAIRAIMSNGARGVEIRISGKLTGERAKSVRFYQGYIAKVGNPAETLVSRGYAQALLKLGVLGVKVSIM---------PPDARLPDEIEIVEKPIEEEV 204          
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_PYRFU (30S ribosomal protein S3P OS=Pyrococcus furiosus GN=rps3p PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.195e-15
Identity = 51/130 (39.23%), Postives = 69/130 (53.08%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 384
            ++ N  L A  QA  L   L  G+  RRA Y  LR IM +GA+G E+ +SGKL  +RAKS++F  GY+   G P    +       LL+ GV+G+KV IM          P   LPD + I   P++EEV
Sbjct:   84 EIKNPYLNAKVQAVRLAQALERGIHFRRAAYAALRAIMNNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM---------PPGARLPDEIEIIEKPVEEEV 204          
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_THEPD (30S ribosomal protein S3P OS=Thermofilum pendens (strain Hrk 5) GN=rps3p PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.561e-15
Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 300
            +V N+ L A   A  +   L+ G+  RRA    L  IM +GA+G E+++SGKL +QR ++ KF  GY+  SG+P  E +D A+ HVLL+ G+ G+KV+IM
Sbjct:   85 EVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISGKLTSQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKVRIM 184          
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_PYRAB (30S ribosomal protein S3P OS=Pyrococcus abyssi GN=rps3p PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.561e-15
Identity = 49/130 (37.69%), Postives = 69/130 (53.08%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 384
            ++ N  L A  QA  +   L  G+  RRA Y  +R IM +GA+G E+ +SGKL  +RAKS++F  GY+   G P    +       LL+ GV+G+KV IM          P   LPD + I   P++EEV
Sbjct:   84 EIKNPYLNAKVQAVRIAQALERGIHFRRAAYAAMRAIMSNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM---------PPDARLPDEIEIIEKPVEEEV 204          
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_THEON (30S ribosomal protein S3P OS=Thermococcus onnurineus (strain NA1) GN=rps3p PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.038e-15
Identity = 48/129 (37.21%), Postives = 68/129 (52.71%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI--HPLKEE 381
            ++ N  L A  QA  L   L  G+  RRA Y  +R IM +GA+G E+ +SGKL  +RAKS++F  GY+   G P    +       LL+ GV+G+KV IM          P   LPD + +   P++EE
Sbjct:   84 EIKNPYLNAKVQAVRLAQALERGVHFRRAAYAAIRAIMRNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVSIM---------PPDAKLPDEIEVIEKPIQEE 203          
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_THEGJ (30S ribosomal protein S3P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps3p PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.662e-15
Identity = 47/127 (37.01%), Postives = 66/127 (51.97%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 381
            ++ N  L A  QA  L   L  G+  RRA Y  +R IM +GA+G E+ +SGKL  +RAKS++F  GY+   G P    +       LL+ GV+G+KV IM          P   LPD + +  + EE
Sbjct:   84 EIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIMRNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM---------PPDARLPDEIEVKEIVEE 201          
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_PYRHO (30S ribosomal protein S3P OS=Pyrococcus horikoshii GN=rps3p PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.541e-15
Identity = 49/130 (37.69%), Postives = 68/130 (52.31%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 384
            ++ N  L A  QA  +   L  G+  RRA Y  +R IM +GA+G E+ +SGKL  +RAKS++F  GY+   G P    +       LL+ GV+G+KV IM          P   LPD + I   P +EEV
Sbjct:   84 EIKNPYLNAKVQAVRIAQALERGIHFRRAAYSAMRAIMNNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM---------PPDARLPDEIEIVEKPAEEEV 204          
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_PYRKO (30S ribosomal protein S3P OS=Pyrococcus kodakaraensis GN=rps3p PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.746e-15
Identity = 47/127 (37.01%), Postives = 65/127 (51.18%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 381
            ++ N  L A  QA  L   L  G+  RRA Y  +R IM +GA+G E+ +SGKL  +RAKS++F  GY+   G P    +        L+ GV+G+KV IM          P   LPD + I  + EE
Sbjct:   84 EIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIMRNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSRGYAQAQLKLGVIGVKVSIM---------PPDAKLPDEIEIKEIVEE 201          
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_METHJ (30S ribosomal protein S3P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps3p PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.564e-14
Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 300
            +V+N  L A   AE L   L  G   R+A    LR IM+SGA GCEV++SGKL   R +  KF +GY+  SG PVN  +D      + + GV+G++V+++
Sbjct:   84 QVDNPNLNAQIMAERLASALERGWYFRKAGSSTLRRIMDSGALGCEVVISGKLTGARGRVQKFTEGYIKHSGDPVNTLVDKGYAVAIKKLGVIGVQVRLI 183          
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_METLZ (30S ribosomal protein S3P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps3p PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.254e-13
Identity = 49/142 (34.51%), Postives = 71/142 (50.00%), Query Frame = 1
Query:    1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIELPV 426
            +V N  L A   AE L   L  G   R+A   V+R +M+SGA GCEVI++GKL   RA+  KF +GY+  SG+P    ++      + + G++G++VKI+          P   LPD   I         APA A  +E  +
Sbjct:   84 QVANPNLNAQIMAERLANALERGWYFRKAGTSVIRRVMDSGALGCEVIIAGKLTGARARVQKFVEGYIKHSGEPSESIVEKGYATAIKKLGIIGVQVKIV---------PPGAKLPDQFEI-----RADAAPAPARVVETDI 211          
The following BLAST results are available for this feature:
BLAST of EY692109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
RS3_THESM1.195e-1538.4630S ribosomal protein S3P OS=Thermococcus sibiricu... [more]
RS3_PYRFU1.195e-1539.2330S ribosomal protein S3P OS=Pyrococcus furiosus G... [more]
RS3_THEPD1.561e-1543.0030S ribosomal protein S3P OS=Thermofilum pendens (... [more]
RS3_PYRAB1.561e-1537.6930S ribosomal protein S3P OS=Pyrococcus abyssi GN=... [more]
RS3_THEON2.038e-1537.2130S ribosomal protein S3P OS=Thermococcus onnurine... [more]
RS3_THEGJ2.662e-1537.0130S ribosomal protein S3P OS=Thermococcus gammatol... [more]
RS3_PYRHO4.541e-1537.6930S ribosomal protein S3P OS=Pyrococcus horikoshii... [more]
RS3_PYRKO7.746e-1537.0130S ribosomal protein S3P OS=Pyrococcus kodakaraen... [more]
RS3_METHJ8.564e-1441.0030S ribosomal protein S3P OS=Methanospirillum hung... [more]
RS3_METLZ3.254e-1334.5130S ribosomal protein S3P OS=Methanocorpusculum la... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-106-H04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692109 ID=EY692109; Name=EY692109; organism=Citrus sinensis; type=EST; length=625bp
AAAGTTAACAATAGGGGTCTCTGTGCCATTGCTCAGGCTGAGTCTCTGCG
TTACAAGCTTCTTGGAGGTCTCGCTGTTCGAAGGGCATGCTATGGTGTGC
TGAGATTTATCATGGAGAGTGGTGCCAAGGGATGTGAGGTTATTGTGAGT
GGAAAGCTCCGGGCTCAACGTGCAAAGTCCATGAAATTTAAAGATGGGTA
CATGATATCCTCAGGTCAACCTGTGAATGAATACATCGACTCAGCTGTAA
GACATGTTCTTCTTAGACAGGGTGTGCTTGGTATCAAGGTGAAGATCATG
CTTGAATGGGATCAAAAGGGCAAGCAAGGGCCAACAACACCTTTGCCTGA
TCTGGTTACCATCCACCCTCTGAAGGAAGAAGTGTATGTTGCACCAGCGA
CGGCAACCAGTATTGAGCTTCCAGTAGCTATAAACCCTGAGTTGAGTTGT
GTCCAATGTCTGATGTAATGATTTAGTAATAGCTTTTATGTTTTCTTTTA
TCCTTTTTTAATTATCTATGGAGGAGCAAGAAAATACTACTGGGTAATGG
GCATGATGTTGTCTTGTCTACAATTTTTGGGTTATTAAAAAATTTTGGGT
TCAGTTTTTAAAAAAAAAAAAAAAA
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