EY692109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_THESM (30S ribosomal protein S3P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps3p PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.195e-15 Identity = 50/130 (38.46%), Postives = 68/130 (52.31%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 384 ++ N A QA L L G+ RRA Y +R IM +GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GVLG+KV IM P LPD + I P++EEV Sbjct: 84 EIKNSYFNAKVQATRLAQALERGVHFRRAAYAAIRAIMSNGARGVEIRISGKLTGERAKSVRFYQGYIAKVGNPAETLVSRGYAQALLKLGVLGVKVSIM---------PPDARLPDEIEIVEKPIEEEV 204
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_PYRFU (30S ribosomal protein S3P OS=Pyrococcus furiosus GN=rps3p PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.195e-15 Identity = 51/130 (39.23%), Postives = 69/130 (53.08%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 384 ++ N L A QA L L G+ RRA Y LR IM +GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV IM P LPD + I P++EEV Sbjct: 84 EIKNPYLNAKVQAVRLAQALERGIHFRRAAYAALRAIMNNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM---------PPGARLPDEIEIIEKPVEEEV 204
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_THEPD (30S ribosomal protein S3P OS=Thermofilum pendens (strain Hrk 5) GN=rps3p PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.561e-15 Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 300 +V N+ L A A + L+ G+ RRA L IM +GA+G E+++SGKL +QR ++ KF GY+ SG+P E +D A+ HVLL+ G+ G+KV+IM Sbjct: 85 EVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISGKLTSQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKVRIM 184
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_PYRAB (30S ribosomal protein S3P OS=Pyrococcus abyssi GN=rps3p PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.561e-15 Identity = 49/130 (37.69%), Postives = 69/130 (53.08%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 384 ++ N L A QA + L G+ RRA Y +R IM +GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV IM P LPD + I P++EEV Sbjct: 84 EIKNPYLNAKVQAVRIAQALERGIHFRRAAYAAMRAIMSNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM---------PPDARLPDEIEIIEKPVEEEV 204
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_THEON (30S ribosomal protein S3P OS=Thermococcus onnurineus (strain NA1) GN=rps3p PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.038e-15 Identity = 48/129 (37.21%), Postives = 68/129 (52.71%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI--HPLKEE 381 ++ N L A QA L L G+ RRA Y +R IM +GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV IM P LPD + + P++EE Sbjct: 84 EIKNPYLNAKVQAVRLAQALERGVHFRRAAYAAIRAIMRNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVSIM---------PPDAKLPDEIEVIEKPIQEE 203
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_THEGJ (30S ribosomal protein S3P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps3p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.662e-15 Identity = 47/127 (37.01%), Postives = 66/127 (51.97%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 381 ++ N L A QA L L G+ RRA Y +R IM +GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV IM P LPD + + + EE Sbjct: 84 EIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIMRNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM---------PPDARLPDEIEVKEIVEE 201
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_PYRHO (30S ribosomal protein S3P OS=Pyrococcus horikoshii GN=rps3p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.541e-15 Identity = 49/130 (37.69%), Postives = 68/130 (52.31%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 384 ++ N L A QA + L G+ RRA Y +R IM +GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV IM P LPD + I P +EEV Sbjct: 84 EIKNPYLNAKVQAVRIAQALERGIHFRRAAYSAMRAIMNNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM---------PPDARLPDEIEIVEKPAEEEV 204
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_PYRKO (30S ribosomal protein S3P OS=Pyrococcus kodakaraensis GN=rps3p PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.746e-15 Identity = 47/127 (37.01%), Postives = 65/127 (51.18%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 381 ++ N L A QA L L G+ RRA Y +R IM +GA+G E+ +SGKL +RAKS++F GY+ G P + L+ GV+G+KV IM P LPD + I + EE Sbjct: 84 EIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIMRNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSRGYAQAQLKLGVIGVKVSIM---------PPDAKLPDEIEIKEIVEE 201
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_METHJ (30S ribosomal protein S3P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps3p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 8.564e-14 Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 300 +V+N L A AE L L G R+A LR IM+SGA GCEV++SGKL R + KF +GY+ SG PVN +D + + GV+G++V+++ Sbjct: 84 QVDNPNLNAQIMAERLASALERGWYFRKAGSSTLRRIMDSGALGCEVVISGKLTGARGRVQKFTEGYIKHSGDPVNTLVDKGYAVAIKKLGVIGVQVRLI 183
BLAST of EY692109 vs. ExPASy Swiss-Prot
Match: RS3_METLZ (30S ribosomal protein S3P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps3p PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.254e-13 Identity = 49/142 (34.51%), Postives = 71/142 (50.00%), Query Frame = 1 Query: 1 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIELPV 426 +V N L A AE L L G R+A V+R +M+SGA GCEVI++GKL RA+ KF +GY+ SG+P ++ + + G++G++VKI+ P LPD I APA A +E + Sbjct: 84 QVANPNLNAQIMAERLANALERGWYFRKAGTSVIRRVMDSGALGCEVIIAGKLTGARARVQKFVEGYIKHSGEPSESIVEKGYATAIKKLGIIGVQVKIV---------PPGAKLPDQFEI-----RADAAPAPARVVETDI 211 The following BLAST results are available for this feature:
BLAST of EY692109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >EY692109 ID=EY692109; Name=EY692109; organism=Citrus sinensis; type=EST; length=625bpback to top |